Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G8668 Trifolium pratense HOM05D000216 ORTHO05D003638 3.8e-35 151.0 78 100.0
Medtr3g029550 Medicago truncatula HOM05D000216 ORTHO05D003638 1.6e-28 129.0 64 95.3
Medtr4g051103 Medicago truncatula HOM05D000216 ORTHO05D003638 1.6e-28 129.0 64 95.3
Psat0s2754g0240 Pisum sativum HOM05D000216 ORTHO05D003638 1.6e-28 129.0 64 95.3
Psat0s2961g0080 Pisum sativum HOM05D000216 ORTHO05D003638 1.6e-28 129.0 64 95.3
Psat0s3650g0160 Pisum sativum HOM05D000216 ORTHO05D003638 1.6e-28 129.0 64 95.3
Psat1g003880 Pisum sativum HOM05D000216 ORTHO05D003638 1.6e-28 129.0 64 95.3
Psat5g134680 Pisum sativum HOM05D000216 ORTHO05D003638 1.6e-28 129.0 64 95.3
Psat6g219400 Pisum sativum HOM05D000216 ORTHO05D003638 1.6e-28 129.0 64 95.3
Psat7g033680 Pisum sativum HOM05D000216 ORTHO05D003638 1.6e-28 129.0 64 95.3
Psat0s1586g0120 Pisum sativum HOM05D000216 ORTHO05D003638 2.2e-27 125.2 64 92.2
LjContig00318g0018562 Lotus japonicus HOM05D000216 ORTHO05D003638 2.9e-27 124.8 64 92.2
Lalb_Chr07g0192171 Lupinus albus HOM05D000216 ORTHO05D003638 2.9e-27 124.8 64 92.2
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 5.0e-27 124.0 64 90.6
arahy.Tifrunner.gnm1.ann1.49E3RC Arachis hypogaea HOM05D000216 ORTHO05D003638 6.5e-27 123.6 64 89.1
arahy.Tifrunner.gnm1.ann1.77R9Y6 Arachis hypogaea HOM05D000216 ORTHO05D003638 6.5e-27 123.6 64 89.1
arahy.Tifrunner.gnm1.ann1.KPH33C Arachis hypogaea HOM05D000216 ORTHO05D003638 6.5e-27 123.6 64 89.1
TPR.G20776 Trifolium pratense HOM05D000216 ORTHO05D003638 6.5e-27 123.6 62 90.3
DCAR_032472 Daucus carota HOM05D000216 ORTHO05D003638 1.1e-26 122.9 64 89.1
Lsat_1_v5_gn_2_1641 Lactuca sativa HOM05D000216 ORTHO05D003638 1.1e-26 122.9 64 89.1
Lsat_1_v5_gn_8_19261 Lactuca sativa HOM05D000216 ORTHO05D003638 1.1e-26 122.9 64 89.1
arahy.Tifrunner.gnm1.ann1.T8J8BP Arachis hypogaea HOM05D000216 ORTHO05D003638 1.5e-26 122.5 75 78.7
CAN.G1185.18 Capsicum annuum HOM05D000216 ORTHO05D003638 1.5e-26 122.5 64 87.5
MELO3C000995.2 Cucumis melo HOM05D000216 ORTHO05D003638 1.5e-26 122.5 64 87.5
Potri.013G139080 Populus trichocarpa HOM05D000216 ORTHO05D003638 1.5e-26 122.5 64 87.5
RcHm_v2.0_CPg0502431 Rosa chinensis HOM05D000216 ORTHO05D003638 1.5e-26 122.5 64 87.5
Sed0006587 Sechium edule HOM05D000216 ORTHO05D003638 1.9e-26 122.1 64 85.9
Sed0012920 Sechium edule HOM05D000216 ORTHO05D003638 1.9e-26 122.1 64 85.9
ATCG00150 Arabidopsis thaliana HOM05D000216 ORTHO05D003638 2.5e-26 121.7 64 85.9
HanXRQChr00c0300g0573211 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-26 121.3 64 87.5
HanXRQChr00c0492g0575101 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-26 121.3 64 87.5
HanXRQChr08g0210201 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-26 121.3 64 87.5
HanXRQChr10g0282501 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-26 121.3 64 87.5
HanXRQChr11g0326631 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-26 121.3 64 87.5
HanXRQChr14g0427991 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-26 121.3 64 87.5
HanXRQCPg0579821 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-26 121.3 64 87.5
Zm00001eb435250 Zea mays HOM05D000216 ORTHO05D003638 3.2e-26 121.3 64 85.9
Zm00001eb435460 Zea mays HOM05D000216 ORTHO05D003638 3.2e-26 121.3 64 85.9
Zm00001eb435730 Zea mays HOM05D000216 ORTHO05D003638 3.2e-26 121.3 64 85.9
Zm00001eb436810 Zea mays HOM05D000216 ORTHO05D003638 3.2e-26 121.3 64 85.9
Zm00001eb437240 Zea mays HOM05D000216 ORTHO05D003638 3.2e-26 121.3 64 85.9
Zm00001eb438330 Zea mays HOM05D000216 ORTHO05D003638 3.2e-26 121.3 64 85.9
Zm00001eb441010 Zea mays HOM05D000216 ORTHO05D003638 3.2e-26 121.3 64 85.9
Zm00001eb442740 Zea mays HOM05D000216 ORTHO05D003638 3.2e-26 121.3 64 85.9
Medtr0002s0530 Medicago truncatula HOM05D000216 ORTHO05D003638 4.2e-26 120.9 64 84.4
QL93p0837_0003 Quercus lobata HOM05D000216 ORTHO05D003638 4.2e-26 120.9 64 87.5
CAN.G386.26 Capsicum annuum HOM05D000216 ORTHO05D003638 5.5e-26 120.6 64 85.9
CAN.G559.2 Capsicum annuum HOM05D000216 ORTHO05D003638 5.5e-26 120.6 64 85.9
CAN.G993.7 Capsicum annuum HOM05D000216 ORTHO05D003638 5.5e-26 120.6 64 85.9
Migut.D01337 Erythranthe guttata HOM05D000216 ORTHO05D003638 5.5e-26 120.6 64 85.9
Migut.D01412 Erythranthe guttata HOM05D000216 ORTHO05D003638 5.5e-26 120.6 64 85.9
SalBow1G2877 Salvia bowleyana HOM05D000216 ORTHO05D003638 5.5e-26 120.6 64 85.9
CSS0018496 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D003638 7.2e-26 120.2 64 84.4
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 7.2e-26 120.2 64 85.9
Gohir.A05G086000 Gossypium hirsutum HOM05D000216 ORTHO05D003638 7.2e-26 120.2 64 84.4
unitig_91.g26494 Utricularia gibba HOM05D000216 ORTHO05D003638 7.2e-26 120.2 64 84.4
Nn092s42878 Nelumbo nucifera HOM05D000216 ORTHO05D003638 9.4e-26 119.8 64 84.4
PSO548G0039 Papaver somniferum HOM05D000216 ORTHO05D003638 9.4e-26 119.8 64 84.4
Sed0015108 Sechium edule HOM05D000216 ORTHO05D003638 9.4e-26 119.8 64 84.4
CARHR056700 Cardamine hirsuta HOM05D000216 ORTHO05D003638 1.2e-25 119.4 64 81.2
CARHR281900 Cardamine hirsuta HOM05D000216 ORTHO05D003638 1.2e-25 119.4 64 82.8
HanXRQChr13g0415501 Helianthus annuus HOM05D000216 ORTHO05D003638 1.2e-25 119.4 61 88.5
BNapus_Darmor_BZH_scaffold_253p00040 Brassica napus HOM05D000216 ORTHO05D003638 1.6e-25 119.0 64 85.9
BolSC29t60571H Brassica oleracea HOM05D000216 ORTHO05D003638 1.6e-25 119.0 64 85.9
BolSC37t60770H Brassica oleracea HOM05D000216 ORTHO05D003638 1.6e-25 119.0 64 85.9
BolSC45t60878H Brassica oleracea HOM05D000216 ORTHO05D003638 1.6e-25 119.0 64 85.9
BolSC45t60935H Brassica oleracea HOM05D000216 ORTHO05D003638 1.6e-25 119.0 64 85.9
BraSC151t45693Z Brassica rapa HOM05D000216 ORTHO05D003638 1.6e-25 119.0 64 85.9
BraSC59t46515Z Brassica rapa HOM05D000216 ORTHO05D003638 1.6e-25 119.0 64 85.9
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 1.6e-25 119.0 64 84.4
Ciclev10013984m.g Citrus clementina HOM05D000216 ORTHO05D003638 2.1e-25 118.6 64 84.4
HanXRQChr12g0380621 Helianthus annuus HOM05D000216 ORTHO05D003638 2.1e-25 118.6 64 85.9
PGR111G0049 Punica granatum HOM05D000216 ORTHO05D003638 2.1e-25 118.6 64 84.4
Sed0022034 Sechium edule HOM05D000216 ORTHO05D003638 2.1e-25 118.6 64 82.8
CDE02G3154 Ceratophyllum demersum HOM05D000216 ORTHO05D003638 2.7e-25 118.2 64 82.8
HanXRQChr13g0425811 Helianthus annuus HOM05D000216 ORTHO05D003638 2.7e-25 118.2 64 84.4
Lj2C1237G0 Lonicera japonica HOM05D000216 ORTHO05D003638 2.7e-25 118.2 64 84.4
Lj2C1238G11 Lonicera japonica HOM05D000216 ORTHO05D003638 2.7e-25 118.2 64 84.4
CDE02G2969 Ceratophyllum demersum HOM05D000216 ORTHO05D003638 3.6e-25 117.9 64 81.2
Gohir.A03G085501 Gossypium hirsutum HOM05D000216 ORTHO05D003638 3.6e-25 117.9 64 81.2
Lsat_1_v5_gn_3_17360 Lactuca sativa HOM05D000216 ORTHO05D003638 4.7e-25 117.5 64 85.9
Manes.13G021650 Manihot esculenta HOM05D000216 ORTHO05D003638 4.7e-25 117.5 59 89.8
LjContig00489g0001571 Lotus japonicus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund03957 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund18044 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund27559 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund27611 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund27865 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund27918 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund27995 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund28152 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund28178 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund28276 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund28388 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund28560 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund28651 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund28794 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund29068 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund29351 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund29741 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund29885 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund30206 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund30310 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund30432 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund30437 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund30852 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund31037 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Hund31056 Selenicereus undatus HOM05D000216 ORTHO05D003638 6.1e-25 117.1 64 82.8
Psat7g038960 Pisum sativum HOM05D000216 ORTHO05D003638 8.0e-25 116.7 64 87.5
Oeu022568.1 Olea europaea HOM05D000216 ORTHO05D003638 1.4e-24 115.9 64 82.8
Phvul.003G256800 Phaseolus vulgaris HOM05D000216 ORTHO05D003638 1.4e-24 115.9 64 84.4
Ah.10g027620 Amaranthus hybridus HOM05D000216 ORTHO05D003638 1.8e-24 115.5 64 82.8
Ah.10g027780 Amaranthus hybridus HOM05D000216 ORTHO05D003638 1.8e-24 115.5 64 82.8
EL10As12g24015 Beta vulgaris HOM05D000216 ORTHO05D003638 1.8e-24 115.5 64 82.8
Hund15942 Selenicereus undatus HOM05D000216 ORTHO05D003638 1.8e-24 115.5 64 81.2
Oeu028759.1 Olea europaea HOM05D000216 ORTHO05D003638 2.3e-24 115.2 64 82.8
Ah.10g028520 Amaranthus hybridus HOM05D000216 ORTHO05D003638 3.0e-24 114.8 64 81.2
Ah.11g051390 Amaranthus hybridus HOM05D000013 ORTHO05D000011 3.0e-24 114.8 64 81.2
Hund27653 Selenicereus undatus HOM05D000216 ORTHO05D003638 4.0e-24 114.4 64 81.2
Ah.05g176550 Amaranthus hybridus HOM05D000216 ORTHO05D003638 1.5e-23 112.5 64 81.2
arahy.Tifrunner.gnm1.ann1.M78D68 Arachis hypogaea HOM05D000216 ORTHO05D003638 2.0e-23 112.1 72 73.6
AUR62012105 Chenopodium quinoa HOM05D000216 ORTHO05D003638 2.0e-23 112.1 64 81.2
AUR62042525 Chenopodium quinoa HOM05D000216 ORTHO05D000580 2.0e-23 112.1 64 81.2
MD16G1100100 Malus domestica HOM05D000216 ORTHO05D003638 4.4e-23 110.9 64 79.7
Gohir.A10G169433 Gossypium hirsutum HOM05D000216 ORTHO05D003638 2.8e-22 108.2 57 84.2
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 2.8e-22 108.2 58 82.8
Psat2g044440 Pisum sativum HOM05D000216 ORTHO05D003518 1.4e-21 105.9 59 84.7
HPP92_007916 Vanilla planifolia HOM05D000216 ORTHO05D003638 9.1e-21 103.2 59 79.7
Sed0017816 Sechium edule HOM05D000216 ORTHO05D003518 2.9e-19 98.2 55 80.0
HanXRQChr14g0428011 Helianthus annuus HOM05D000216 ORTHO05D003638 5.0e-19 97.4 53 84.9
Medtr7g116680 Medicago truncatula HOM05D000216 ORTHO05D003638 5.0e-19 97.4 51 92.2
BolSC46t60985H Brassica oleracea HOM05D000216 ORTHO05D003638 6.6e-19 97.1 54 83.3
SEGI_03518 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 8.6e-19 96.7 65 69.2
SEGI_23567 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 8.6e-19 96.7 65 69.2
SEGI_24812 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 8.6e-19 96.7 65 69.2
SEGI_26801 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 8.6e-19 96.7 65 69.2
SEGI_31181 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 8.6e-19 96.7 65 69.2
SEGI_02904 Sequoiadendron giganteum HOM05D000743 ORTHO05D000580 1.1e-18 96.3 65 69.2
SEGI_31125 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.1e-18 96.3 65 67.7
SEGI_00749 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.5e-18 95.9 65 69.2
SEGI_36364 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 2.5e-18 95.1 65 69.2
BraSC140t45590Z Brassica rapa HOM05D000216 ORTHO05D003638 1.2e-17 92.8 57 77.2
BraSC143t45679Z Brassica rapa HOM05D000216 ORTHO05D003638 1.2e-17 92.8 57 77.2
SEGI_01684 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.2e-17 92.8 65 67.7
SEGI_39734 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 4.7e-17 90.9 61 68.9
HanXRQChr00c0601g0576511 Helianthus annuus HOM05D000216 ORTHO05D003638 6.1e-17 90.5 49 83.7
SEGI_13281 Sequoiadendron giganteum HOM05D000580 ORTHO05D001362 1.2e-15 86.3 60 65.0
BraSC140t45596Z Brassica rapa HOM05D000216 ORTHO05D003638 1.5e-15 85.9 54 74.1
Mapoly0044s0072 Marchantia polymorpha HOM05D000216 ORTHO05D003638 1.5e-15 85.9 50 80.0
SEGI_21436 Sequoiadendron giganteum HOM05D000216 ORTHO05D015708 3.4e-15 84.7 60 66.7
Sed0025462 Sechium edule HOM05D000216 ORTHO05D003638 5.7e-15 84.0 55 72.7
Lalb_Chr09g0335341 Lupinus albus HOM05D000216 ORTHO05D003638 8.3e-14 80.1 42 88.1
Lsat_1_v5_gn_3_44020 Lactuca sativa HOM05D000216 ORTHO05D003638 1.8e-13 79.0 44 81.8
CsaV3_UNG207830 Cucumis sativus L. HOM05D000216 ORTHO05D003638 5.4e-13 77.4 45 77.8
arahy.Tifrunner.gnm1.ann1.TG7LSU Arachis hypogaea HOM05D000216 ORTHO05D003638 2.7e-12 75.1 42 81.0
Nitab4.5_0001639g0020 Nicotiana tabacum HOM05D000216 ORTHO05D003638 2.7e-12 75.1 45 75.6
HPP92_028442 Vanilla planifolia HOM05D000216 ORTHO05D000634 4.6e-12 74.3 42 78.6
Lalb_Chr06g0172981 Lupinus albus HOM05D000216 ORTHO05D003638 5.9e-12 73.9 40 87.5
Gorai.001G035800 Gossypium raimondii HOM05D000216 ORTHO05D003638 2.3e-11 72.0 40 77.5
Hund01856 Selenicereus undatus HOM05D000216 ORTHO05D003638 8.6e-11 70.1 49 63.3
Lalb_Chr06g0173061 Lupinus albus HOM05D000216 ORTHO05D003638 1.9e-10 68.9 44 72.7
HanXRQChr07g0188301 Helianthus annuus HOM05D000216 ORTHO05D003638 2.5e-10 68.6 38 81.6
MD16G1263300 Malus domestica HOM05D000216 ORTHO05D003638 2.5e-10 68.6 42 76.2
SMO086G0032 Selaginella moellendorffii HOM05D000216 ORTHO05D003638 2.5e-10 68.6 54 57.4
Hund01860 Selenicereus undatus HOM05D000216 ORTHO05D003638 2.5e-10 68.6 49 61.2
Solyc10g044560.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 4.3e-10 67.8 40 77.5
Gohir.D07G034200 Gossypium hirsutum HOM05D000216 ORTHO05D003638 7.3e-10 67.0 44 70.5
Nitab4.5_0002175g0020 Nicotiana tabacum HOM05D000216 ORTHO05D003638 7.3e-10 67.0 36 80.6
Lalb_Chr01g0008441 Lupinus albus HOM05D000216 ORTHO05D003638 2.8e-09 65.1 37 83.8
Eucgr.A00333 Eucalyptus grandis HOM05D000216 ORTHO05D003638 6.2e-09 63.9 32 87.5
Nn2g15011 Nelumbo nucifera HOM05D000216 ORTHO05D003638 1.0e-08 63.2 29 93.1
Solyc08g028870.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 4.0e-08 61.2 36 75.0
Solyc00g500335.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 5.2e-08 60.8 33 81.8
Hund30593 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.4e-07 58.2 64 46.9
arahy.Tifrunner.gnm1.ann1.3KQL5I Arachis hypogaea HOM05D000216 ORTHO05D003518 9.8e-07 56.6 33 75.8
Solyc00g500051.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 3.7e-06 54.7 29 82.8
Solyc00g500134.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 3.7e-06 54.7 29 82.8
Solyc00g500204.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 3.7e-06 54.7 29 82.8
Solyc00g500291.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 3.7e-06 54.7 29 82.8
Solyc00g500320.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 3.7e-06 54.7 29 82.8
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 8.3e-06 53.5 29 82.8


User provided reference genes

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