Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G7702 Trifolium pratense HOM05D003901 ORTHO05D004511 1.5e-32 142.1 65 100.0
Ca_19879_v3 Cicer arietinum L. HOM05D003901 ORTHO05D004511 6.2e-31 136.7 65 96.9
Glyma.13G317500 Glycine max HOM05D003901 ORTHO05D004511 2.0e-29 131.7 65 93.8
Lj3g0014833 Lotus japonicus HOM05D003901 ORTHO05D004511 1.7e-28 128.6 65 92.3
Glyma.12G183500 Glycine max HOM05D003901 ORTHO05D004511 2.2e-28 128.3 65 92.3
Phvul.005G125300 Phaseolus vulgaris HOM05D003901 ORTHO05D004511 2.2e-28 128.3 65 92.3
VMungo1080G0029 Vigna mungo HOM05D003901 ORTHO05D004511 2.2e-28 128.3 65 92.3
Lalb_Chr03g0028001 Lupinus albus HOM05D003901 ORTHO05D004511 1.4e-27 125.6 65 89.2
COL.COLO4_19917 Corchorus olitorius HOM05D003901 ORTHO05D004511 1.9e-27 125.2 65 87.7
Duzib168G1973 Durio zibethinus HOM05D003901 ORTHO05D004511 1.9e-27 125.2 65 87.7
Duzib170G0819 Durio zibethinus HOM05D003901 ORTHO05D004511 1.9e-27 125.2 65 87.7
Duzib150G1114 Durio zibethinus HOM05D003901 ORTHO05D004511 2.4e-27 124.8 65 86.2
Medtr2g086140 Medicago truncatula HOM05D003901 ORTHO05D004511 3.2e-27 124.4 65 86.2
QL01p012653 Quercus lobata HOM05D003901 ORTHO05D004511 3.2e-27 124.4 65 86.2
TWI31G1346 Tripterygium wilfordii HOM05D003901 ORTHO05D004511 4.2e-27 124.0 65 84.6
Cfa010046 Carpinus fangiana HOM05D003901 ORTHO05D004511 5.5e-27 123.6 65 86.2
Gohir.A05G082000 Gossypium hirsutum HOM05D003901 ORTHO05D004511 5.5e-27 123.6 65 84.6
CiPaw.14G101900 Carya illinoinensis HOM05D003901 ORTHO05D004511 7.1e-27 123.2 65 86.2
Haze_23407 Corylus avellana HOM05D003901 ORTHO05D004511 7.1e-27 123.2 65 86.2
TWI79G1394 Tripterygium wilfordii HOM05D003901 ORTHO05D004511 7.1e-27 123.2 65 84.6
Lalb_Chr01g0004811 Lupinus albus HOM05D003901 ORTHO05D004511 9.3e-27 122.9 65 86.2
GSVIVG01036170001 Vitis vinifera HOM05D003901 ORTHO05D004511 9.3e-27 122.9 65 84.6
Thhalv10010089m.g Eutrema salsugineum HOM05D003901 ORTHO05D004511 1.2e-26 122.5 65 83.1
Gohir.D05G084900 Gossypium hirsutum HOM05D003901 ORTHO05D004511 1.2e-26 122.5 65 83.1
Gorai.009G086800 Gossypium raimondii HOM05D003901 ORTHO05D004511 1.2e-26 122.5 65 83.1
Potri.004G184900 Populus trichocarpa HOM05D003901 ORTHO05D004511 1.2e-26 122.5 65 84.6
Prupe.8G049600 Prunus persica HOM05D003901 ORTHO05D004511 1.2e-26 122.5 65 83.1
Sabra04G0124700 Salix brachista HOM05D003901 ORTHO05D004511 1.2e-26 122.5 65 84.6
Sp5g16690 Schrenkiella parvula HOM05D003901 ORTHO05D004511 1.2e-26 122.5 65 83.1
Ca_19387_v3 Cicer arietinum L. HOM05D003901 ORTHO05D004511 1.6e-26 122.1 65 87.7
Ca_19390_v3 Cicer arietinum L. HOM05D003901 ORTHO05D004511 1.6e-26 122.1 65 87.7
FAN16G3118 Fragaria x ananassa HOM05D003901 ORTHO05D004511 1.6e-26 122.1 65 83.1
FAN21G1062 Fragaria x ananassa HOM05D003901 ORTHO05D004511 1.6e-26 122.1 65 83.1
FAN25G0348 Fragaria x ananassa HOM05D003901 ORTHO05D004511 1.6e-26 122.1 65 83.1
FAN25G0558 Fragaria x ananassa HOM05D003901 ORTHO05D004511 1.6e-26 122.1 65 83.1
RcHm_v2.0_Chr5g0044121 Rosa chinensis HOM05D003901 ORTHO05D004511 1.6e-26 122.1 65 83.1
Ah.08g215860 Amaranthus hybridus HOM05D003901 ORTHO05D004511 2.1e-26 121.7 65 81.5
Eucgr.B03876 Eucalyptus grandis HOM05D003901 ORTHO05D004511 2.1e-26 121.7 65 84.6
Lalb_Chr19g0136621 Lupinus albus HOM05D003901 ORTHO05D004511 2.7e-26 121.3 65 86.2
CsaV3_6G014950 Cucumis sativus L. HOM05D003901 ORTHO05D004511 3.5e-26 120.9 65 84.6
TPR.G17239 Trifolium pratense HOM05D003901 ORTHO05D004511 3.5e-26 120.9 66 87.9
EL10Ac7g15802 Beta vulgaris HOM05D003901 ORTHO05D004511 4.6e-26 120.6 65 81.5
BcaB02g10752 Brassica carinata HOM05D003901 ORTHO05D004511 4.6e-26 120.6 65 81.5
CSS0013179 Camellia sinensis var. sinensis HOM05D003901 ORTHO05D004511 4.6e-26 120.6 65 81.5
CSS0026986 Camellia sinensis var. sinensis HOM05D003901 ORTHO05D004511 4.6e-26 120.6 65 81.5
Dinv29461 Davidia involucrata HOM05D003901 ORTHO05D004511 4.6e-26 120.6 65 81.5
THA.LOC104810914 Tarenaya hassleriana HOM05D003901 ORTHO05D004511 4.6e-26 120.6 65 81.5
Ciclev10027719m.g Citrus clementina HOM05D003901 ORTHO05D004511 6.0e-26 120.2 65 84.6
Sc12g0004380 Simmondsia chinensis HOM05D003901 ORTHO05D004511 6.0e-26 120.2 65 81.5
arahy.Tifrunner.gnm1.ann1.3X8FVR Arachis hypogaea HOM05D003901 ORTHO05D004511 7.9e-26 119.8 65 86.2
Nitab4.5_0000234g0130 Nicotiana tabacum HOM05D003901 ORTHO05D004511 7.9e-26 119.8 65 81.5
Potri.009G144800 Populus trichocarpa HOM05D003901 ORTHO05D004511 7.9e-26 119.8 65 83.1
AL5G22600 Arabidopsis lyrata HOM05D003901 ORTHO05D004511 1.3e-25 119.0 65 81.5
MD10G1043400 Malus domestica HOM05D003901 ORTHO05D004511 1.3e-25 119.0 65 78.5
CANSAT54G2221 Cannabis sativa HOM05D003901 ORTHO05D004511 1.8e-25 118.6 65 81.5
AUR62009782 Chenopodium quinoa HOM05D003901 ORTHO05D004511 1.8e-25 118.6 65 81.5
FAN11G2495 Fragaria x ananassa HOM05D003901 ORTHO05D004511 1.8e-25 118.6 65 81.5
Sed0027491 Sechium edule HOM05D003901 ORTHO05D004511 1.8e-25 118.6 65 83.1
BcaB01g01161 Brassica carinata HOM05D003901 ORTHO05D004511 3.0e-25 117.9 66 81.8
BcaC01g02054 Brassica carinata HOM05D003901 ORTHO05D004511 3.0e-25 117.9 66 81.8
C03p69110 Brassica napus HOM05D003901 ORTHO05D004511 3.0e-25 117.9 66 81.8
BolC3t19166H Brassica oleracea HOM05D003901 ORTHO05D004511 3.0e-25 117.9 66 81.8
Nitab4.5_0002837g0010 Nicotiana tabacum HOM05D003901 ORTHO05D004511 3.0e-25 117.9 65 80.0
Aa31LG4G13900 Aethionema arabicum HOM05D003901 ORTHO05D004511 3.9e-25 117.5 65 80.0
Medtr4g053675 Medicago truncatula HOM05D003901 ORTHO05D004511 3.9e-25 117.5 69 82.6
PGR102G2249 Punica granatum HOM05D003901 ORTHO05D004511 3.9e-25 117.5 65 80.0
AT3G44530 Arabidopsis thaliana HOM05D003901 ORTHO05D004511 5.1e-25 117.1 65 80.0
Carub.0005s1017 Capsella rubella HOM05D003901 ORTHO05D004511 5.1e-25 117.1 65 80.0
RcHm_v2.0_Chr1g0317741 Rosa chinensis HOM05D003901 ORTHO05D004511 5.1e-25 117.1 65 78.5
AUR62039227 Chenopodium quinoa HOM05D003901 ORTHO05D004511 6.7e-25 116.7 65 83.1
MD00G1078300 Malus domestica HOM05D003901 ORTHO05D004511 6.7e-25 116.7 66 80.3
TAR623G0259 Trochodendron aralioides HOM05D003901 ORTHO05D004511 6.7e-25 116.7 65 80.0
CSS0003254 Camellia sinensis var. sinensis HOM05D003901 ORTHO05D004511 8.7e-25 116.3 65 80.0
Sp5g16720 Schrenkiella parvula HOM05D003901 ORTHO05D004511 8.7e-25 116.3 64 81.2
Aqoxy4G02822 Aquilegia oxysepala HOM05D003901 ORTHO05D004511 1.1e-24 115.9 65 76.9
SGA_v2.0_scaffold22G09887 Striga asiatica HOM05D003901 ORTHO05D004511 1.1e-24 115.9 65 78.5
A06p21860 Brassica napus HOM05D003901 ORTHO05D004511 1.5e-24 115.5 66 80.3
BraA06t25277Z Brassica rapa HOM05D003901 ORTHO05D004511 1.5e-24 115.5 66 80.3
Rhsim13G0109800 Rhododendron simsii HOM05D003901 ORTHO05D004511 1.5e-24 115.5 65 80.0
PSO339G1552 Papaver somniferum HOM05D003901 ORTHO05D004511 1.9e-24 115.2 65 76.9
PSO384G0212 Papaver somniferum HOM05D003901 ORTHO05D004511 1.9e-24 115.2 65 76.9
Actinidia24202 Actinidia chinensis HOM05D003901 ORTHO05D004511 2.5e-24 114.8 65 75.4
Cc01_g09440 Coffea canephora HOM05D003901 ORTHO05D004511 3.3e-24 114.4 65 78.5
Dinv42569 Davidia involucrata HOM05D003901 ORTHO05D004511 3.3e-24 114.4 65 76.9
Gohir.A08G004600 Gossypium hirsutum HOM05D003901 ORTHO05D004511 3.3e-24 114.4 65 78.5
Psat5g093200 Pisum sativum HOM05D003901 ORTHO05D004511 3.3e-24 114.4 65 81.5
Solyc11g067200.2 Solanum lycopersicum HOM05D003901 ORTHO05D004511 3.3e-24 114.4 65 76.9
Sopen11g026900 Solanum pennellii HOM05D003901 ORTHO05D004511 3.3e-24 114.4 65 76.9
PGSC0003DMG400007404 Solanum tuberosum HOM05D003901 ORTHO05D004511 3.3e-24 114.4 65 76.9
SGA_v2.0_scaffold147G36366 Striga asiatica HOM05D003901 ORTHO05D004511 3.3e-24 114.4 65 78.5
Nn1g08411 Nelumbo nucifera HOM05D003901 ORTHO05D004511 4.3e-24 114.0 65 76.9
vmacro03304 Vaccinium macrocarpon HOM05D003901 ORTHO05D004511 4.3e-24 114.0 65 76.9
FAN03G3037 Fragaria x ananassa HOM05D003901 ORTHO05D004511 5.6e-24 113.6 65 75.4
Gorai.004G009300 Gossypium raimondii HOM05D003901 ORTHO05D004511 5.6e-24 113.6 66 80.3
Sabra09G0112300 Salix brachista HOM05D003901 ORTHO05D004511 5.6e-24 113.6 67 79.1
Sabra09G0115000 Salix brachista HOM05D003901 ORTHO05D004511 5.6e-24 113.6 67 79.1
CAN.G942.7 Capsicum annuum HOM05D003901 ORTHO05D004511 7.4e-24 113.2 66 78.8
Os09g0567700 Oryza sativa ssp. japonica HOM05D003901 ORTHO05D004511 7.4e-24 113.2 65 73.8
MSTRG.18747 Avicennia marina HOM05D003901 ORTHO05D004511 9.6e-24 112.8 65 76.9
Hund20872 Selenicereus undatus HOM05D003901 ORTHO05D004511 1.3e-23 112.5 65 76.9
FvH4_7g01610 Fragaria vesca HOM05D003901 ORTHO05D004511 2.1e-23 111.7 65 73.8
FAN06G4251 Fragaria x ananassa HOM05D003901 ORTHO05D004511 2.1e-23 111.7 65 73.8
CARHR104350 Cardamine hirsuta HOM05D003901 ORTHO05D004511 2.8e-23 111.3 65 76.9
CDE08G0670 Ceratophyllum demersum HOM05D003901 ORTHO05D004511 4.8e-23 110.5 65 73.8
Migut.D02350 Erythranthe guttata HOM05D003901 ORTHO05D004511 4.8e-23 110.5 65 73.8
Zm00001eb307860 Zea mays HOM05D003901 ORTHO05D004511 1.1e-22 109.4 65 73.8
Zm00001eb121570 Zea mays HOM05D003901 ORTHO05D004511 1.4e-22 109.0 65 75.4
Lj1C241G3 Lonicera japonica HOM05D003901 ORTHO05D004511 3.1e-22 107.8 65 73.8
HPP92_006803 Vanilla planifolia HOM05D003901 ORTHO05D004511 3.1e-22 107.8 65 76.9
AUR62044072 Chenopodium quinoa HOM05D003901 ORTHO05D004511 4.0e-22 107.5 65 80.0
Ah.15g095680 Amaranthus hybridus HOM05D003901 ORTHO05D004511 6.9e-22 106.7 65 69.2
DCAR_012182 Daucus carota HOM05D003901 ORTHO05D004511 6.9e-22 106.7 65 69.2
ATR0820G249 Amborella trichopoda HOM05D003901 ORTHO05D004511 9.0e-22 106.3 65 72.3
Aqoxy2G01263 Aquilegia oxysepala HOM05D003901 ORTHO05D004511 9.0e-22 106.3 65 70.8
Aqoxy2G01563 Aquilegia oxysepala HOM05D003901 ORTHO05D004511 9.0e-22 106.3 65 70.8
ECA233G5986 Erigeron canadensis HOM05D003901 ORTHO05D004511 9.0e-22 106.3 68 76.5
Lsat_1_v5_gn_6_40560 Lactuca sativa HOM05D003901 ORTHO05D004511 1.2e-21 105.9 68 75.0
HanXRQChr13g0397211 Helianthus annuus HOM05D003901 ORTHO05D004511 3.4e-21 104.4 67 74.6
ClCG02G022110 Citrullus lanatus HOM05D003901 ORTHO05D004511 4.5e-21 104.0 98 56.1
Actinidia07234 Actinidia chinensis HOM05D003901 ORTHO05D004511 2.2e-20 101.7 71 69.0
MELO3C021430.2 Cucumis melo HOM05D003901 ORTHO05D004511 2.9e-20 101.3 105 52.4
Oeu038978.1 Olea europaea HOM05D003901 ORTHO05D004511 1.9e-19 98.6 65 67.7
Oeu058251.1 Olea europaea HOM05D003901 ORTHO05D004511 2.5e-19 98.2 65 66.2
Pp3c27_1720 Physcomitrium patens HOM05D003901 ORTHO05D004511 7.1e-19 96.7 65 66.2
Pp3c16_16320 Physcomitrium patens HOM05D003901 ORTHO05D004511 1.6e-18 95.5 65 64.6
CDE06G1438 Ceratophyllum demersum HOM05D003901 ORTHO05D004511 6.0e-18 93.6 80 57.5
Peaxi162Scf00086g02615 Petunia axillaris HOM05D003901 ORTHO05D004511 8.7e-17 89.7 69 65.2
SMO139G0105 Selaginella moellendorffii HOM05D003901 ORTHO05D004511 2.5e-16 88.2 65 60.0
SMO165G0087 Selaginella moellendorffii HOM05D003901 ORTHO05D004511 2.5e-16 88.2 65 60.0
Mapoly0043s0108 Marchantia polymorpha HOM05D003901 ORTHO05D004511 5.7e-16 87.0 66 63.6
AagrBONN_evm.TU.Sc2ySwM_228.5081 Anthoceros agrestis HOM05D003901 ORTHO05D004511 1.3e-15 85.9 65 58.5
Lj1A234G35 Lonicera japonica HOM05D003901 ORTHO05D004511 6.3e-15 83.6 61 65.6
Prupe.8G049400 Prunus persica HOM05D003901 ORTHO05D004511 6.3e-15 83.6 39 92.3
SEGI_08454 Sequoiadendron giganteum HOM05D003901 ORTHO05D004511 7.2e-11 70.1 37 78.4
CBR_g60059 Chara braunii HOM05D003901 ORTHO05D004511 1.2e-10 69.3 66 53.0
MCO11G428 Micromonas commoda HOM05D003901 ORTHO05D004511 3.0e-09 64.7 63 47.6
MCO11G429 Micromonas commoda HOM05D003901 ORTHO05D004511 3.0e-09 64.7 63 47.6
PRCOL_00000149 Prasinoderma coloniale HOM05D003901 ORTHO05D004511 4.3e-08 60.8 63 42.9
SGA_v2.0_scaffold254G45250 Striga asiatica HOM05D005714 ORTHO05D051379 9.7e-08 59.7 35 74.3
Actinidia37332 Actinidia chinensis HOM05D003901 ORTHO05D004511 1.3e-07 59.3 26 96.2
Cre13.g575950 Chlamydomonas reinhardtii HOM05D003901 ORTHO05D004511 2.8e-07 58.2 63 39.7
SGA_v2.0_scaffold21G09652 Striga asiatica HOM05D003901 ORTHO05D051379 4.8e-07 57.4 35 71.4


User provided reference genes

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