Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G709 Trifolium pratense HOM05D000070 ORTHO05D006627 2.4e-37 158.3 79 100.0
TPR.G9706 Trifolium pratense HOM05D000070 ORTHO05D006627 2.1e-33 145.2 79 92.4
Psat7g132840 Pisum sativum HOM05D000070 ORTHO05D006627 1.4e-32 142.5 79 88.6
Medtr4g083460 Medicago truncatula HOM05D000070 ORTHO05D006627 3.1e-32 141.4 79 87.3
Ca_18785_v3 Cicer arietinum L. HOM05D000070 ORTHO05D006627 2.4e-29 131.7 79 82.3
Glyma.07G224000 Glycine max HOM05D000070 ORTHO05D006627 8.7e-27 123.2 79 74.7
Lj4g0001942 Lotus japonicus HOM05D000070 ORTHO05D006627 1.2e-25 119.4 79 75.9
Lalb_Chr05g0219821 Lupinus albus HOM05D000070 ORTHO05D006627 3.4e-23 111.3 79 69.6
Phvul.002G100600 Phaseolus vulgaris HOM05D000070 ORTHO05D006627 4.9e-22 107.5 79 65.8
arahy.Tifrunner.gnm1.ann1.UR3YMK Arachis hypogaea HOM05D000070 ORTHO05D006627 1.9e-21 105.5 79 68.4
arahy.Tifrunner.gnm1.ann1.REAP7F Arachis hypogaea HOM05D000070 ORTHO05D006627 4.2e-21 104.4 79 67.1
Cpa.g.sc138.31 Carica papaya HOM05D000070 ORTHO05D006627 4.0e-16 87.8 80 55.0
MD05G1251500 Malus domestica HOM05D000070 ORTHO05D006627 9.9e-15 83.2 79 54.4
Prupe.4G112300 Prunus persica HOM05D000070 ORTHO05D006627 3.8e-14 81.3 80 55.0
FvH4_3g12310 Fragaria vesca HOM05D000070 ORTHO05D006627 1.9e-13 79.0 79 53.2
FAN16G1763 Fragaria x ananassa HOM05D000070 ORTHO05D006627 1.9e-13 79.0 79 53.2
Cfa006373 Carpinus fangiana HOM05D000070 ORTHO05D006627 2.4e-13 78.6 80 51.2
Haze_04406 Corylus avellana HOM05D000070 ORTHO05D006627 2.4e-13 78.6 80 51.2
CANSAT35G0895 Cannabis sativa HOM05D000070 ORTHO05D006627 3.2e-13 78.2 79 53.2
Lj4A674T64 Lonicera japonica HOM05D000070 ORTHO05D006627 3.2e-13 78.2 79 54.4
Nn7g37939 Nelumbo nucifera HOM05D000070 ORTHO05D006627 2.1e-12 75.5 77 49.4
Actinidia01326 Actinidia chinensis HOM05D000070 ORTHO05D006627 2.7e-12 75.1 80 50.0
RcHm_v2.0_Chr5g0020121 Rosa chinensis HOM05D000070 ORTHO05D006627 3.5e-12 74.7 79 53.2
TAR626G1726 Trochodendron aralioides HOM05D000070 ORTHO05D006627 4.6e-12 74.3 77 51.9
GSVIVG01013614001 Vitis vinifera HOM05D000070 ORTHO05D006627 4.6e-12 74.3 80 50.0
FAN21G2030 Fragaria x ananassa HOM05D000070 ORTHO05D006627 6.0e-12 73.9 79 51.9
Cc10_g13650 Coffea canephora HOM05D000070 ORTHO05D006627 7.9e-12 73.6 80 51.2
Aqoxy1G01537 Aquilegia oxysepala HOM05D000070 ORTHO05D006627 1.0e-11 73.2 77 50.6
Gohir.D10G048401 Gossypium hirsutum HOM05D000070 ORTHO05D006627 1.0e-11 73.2 79 51.9
Gorai.011G051500 Gossypium raimondii HOM05D000070 ORTHO05D006627 1.0e-11 73.2 79 51.9
QL11p017850 Quercus lobata HOM05D000070 ORTHO05D006627 1.3e-11 72.8 80 47.5
Manes.11G051180 Manihot esculenta HOM05D000070 ORTHO05D006627 2.3e-11 72.0 79 49.4
CiPaw.02G023600 Carya illinoinensis HOM05D000070 ORTHO05D006627 3.0e-11 71.6 82 48.8
vmacro20772 Vaccinium macrocarpon HOM05D000070 ORTHO05D006627 3.9e-11 71.2 81 49.4
Duzib192G0613 Durio zibethinus HOM05D000070 ORTHO05D006627 5.1e-11 70.9 79 50.6
Rhsim01G0112400 Rhododendron simsii HOM05D000070 ORTHO05D006627 5.1e-11 70.9 81 49.4
Atru.chr10.621 Acer truncatum HOM05D000070 ORTHO05D006627 6.7e-11 70.5 80 51.2
Dinv05864 Davidia involucrata HOM05D000070 ORTHO05D006627 6.7e-11 70.5 80 47.5
FAN26G0150 Fragaria x ananassa HOM05D000049 ORTHO05D006627 6.7e-11 70.5 79 53.2
Thecc.06G135300 Theobroma cacao HOM05D000070 ORTHO05D006627 8.7e-11 70.1 79 50.6
AUR62032439 Chenopodium quinoa HOM05D000070 ORTHO05D006627 1.1e-10 69.7 82 45.1
Sp6g34430 Schrenkiella parvula HOM05D000070 ORTHO05D006627 1.1e-10 69.7 80 45.0
CARHR204530 Cardamine hirsuta HOM05D000070 ORTHO05D006627 1.5e-10 69.3 80 46.2
AUR62024782 Chenopodium quinoa HOM05D000070 ORTHO05D006627 1.5e-10 69.3 82 45.1
COL.COLO4_30925 Corchorus olitorius HOM05D000070 ORTHO05D006627 1.5e-10 69.3 80 51.2
DCAR_014363 Daucus carota HOM05D000070 ORTHO05D006627 1.5e-10 69.3 78 46.2
PSO541G5972 Papaver somniferum HOM05D000070 ORTHO05D006627 1.5e-10 69.3 80 46.2
PSO675G1403 Papaver somniferum HOM05D000070 ORTHO05D006627 1.5e-10 69.3 80 46.2
PGR102G0872 Punica granatum HOM05D000070 ORTHO05D006627 2.5e-10 68.6 80 45.0
Hma1.2p1_1220F.1_g267990 Hydrangea macrophylla HOM05D000070 ORTHO05D006627 3.3e-10 68.2 80 45.0
TWI09G1172 Tripterygium wilfordii HOM05D000070 ORTHO05D006627 3.3e-10 68.2 80 48.8
Hund09412 Selenicereus undatus HOM05D000070 ORTHO05D006627 7.4e-10 67.0 79 41.8
Ciclev10014090m.g Citrus clementina HOM05D000070 ORTHO05D006627 9.6e-10 66.6 80 46.2
Aa31LG3G18070 Aethionema arabicum HOM05D000065 ORTHO05D006627 1.6e-09 65.9 80 43.8
Carub.0006s0739 Capsella rubella HOM05D000070 ORTHO05D006627 1.6e-09 65.9 79 44.3
EL10Ac2g02462 Beta vulgaris HOM05D000070 ORTHO05D006627 2.1e-09 65.5 77 41.6
Sabra01G0137800 Salix brachista HOM05D000070 ORTHO05D006627 2.1e-09 65.5 79 44.3
Sc07g0007670 Simmondsia chinensis HOM05D000070 ORTHO05D006627 2.1e-09 65.5 80 42.5
Eucgr.E02009 Eucalyptus grandis HOM05D000070 ORTHO05D006627 2.8e-09 65.1 78 44.9
Oeu040394.2 Olea europaea HOM05D000070 ORTHO05D006627 2.8e-09 65.1 80 43.8
AT5G08470 Arabidopsis thaliana HOM05D000070 ORTHO05D006627 4.8e-09 64.3 79 46.8
Ah.15g098730 Amaranthus hybridus HOM05D000070 ORTHO05D006627 6.2e-09 63.9 77 41.6
Nitab4.5_0000317g0130 Nicotiana tabacum HOM05D000070 ORTHO05D006627 8.1e-09 63.5 79 46.8
Solyc04g057960.4 Solanum lycopersicum HOM05D000070 ORTHO05D006627 8.1e-09 63.5 79 45.6
Sopen04g025820 Solanum pennellii HOM05D000070 ORTHO05D006627 8.1e-09 63.5 79 45.6
CAN.G405.6 Capsicum annuum HOM05D000070 ORTHO05D006627 1.4e-08 62.8 79 45.6
Thhalv10012497m.g Eutrema salsugineum HOM05D000070 ORTHO05D006627 1.4e-08 62.8 80 42.5
Nitab4.5_0003485g0060 Nicotiana tabacum HOM05D000070 ORTHO05D006627 1.4e-08 62.8 79 44.3
Sed0014200 Sechium edule HOM05D000070 ORTHO05D006627 1.4e-08 62.8 79 45.6
BcaB08g37256 Brassica carinata HOM05D000070 ORTHO05D006627 1.8e-08 62.4 79 44.3
Peaxi162Scf00066g00526 Petunia axillaris HOM05D000070 ORTHO05D006627 1.8e-08 62.4 79 45.6
A10p28270 Brassica napus HOM05D000070 ORTHO05D006627 4.0e-08 61.2 79 41.8
MBI01_g11418_MAGBIO Magnolia biondii HOM05D000070 ORTHO05D006627 9.0e-08 60.1 78 47.4
C09p68530 Brassica napus HOM05D000070 ORTHO05D006627 1.2e-07 59.7 79 40.5
Potri.001G174100 Populus trichocarpa HOM05D000070 ORTHO05D006627 2.0e-07 58.9 79 43.0
Migut.C01080 Erythranthe guttata HOM05D000070 ORTHO05D006627 4.5e-07 57.8 79 44.3
ATR0763G153 Amborella trichopoda HOM05D000070 ORTHO05D006627 9.9e-07 56.6 78 46.2
ECA247G0604 Erigeron canadensis HOM05D000070 ORTHO05D006627 1.7e-06 55.8 79 39.2
ClCG01G008970 Citrullus lanatus HOM05D000070 ORTHO05D006627 2.2e-06 55.5 79 41.8
Lsat_1_v5_gn_1_6720 Lactuca sativa HOM05D000070 ORTHO05D006627 3.8e-06 54.7 76 40.8
SalBow7G2869 Salvia bowleyana HOM05D000070 ORTHO05D006627 3.8e-06 54.7 80 42.5
SHI32171 Sapria himalayana HOM05D000070 ORTHO05D006627 3.8e-06 54.7 80 42.5
SGA_v2.0_scaffold52G18907 Striga asiatica HOM05D000070 ORTHO05D006627 6.4e-06 53.9 79 40.5


User provided reference genes

Program Settings