Gene: Sopen04g025820

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g025820
  • Transcript Identifier Sopen04g025820.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 66807353-66827233 : negative

Gene Family Information

  • ID HOM05D000070
  • #Genes/#Species 3945/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g025820.1

Descriptions

  • Description an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals. | peroxisome 1 (PEX1) | FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, binding, nucleotide binding, ATP binding | INVOLVED IN: protein import into peroxisome matrix, fatty acid beta-oxidation, response to stress | LOCATED IN: peroxisome | EXPRESSED IN: 14 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, AAA type, core , ATPase, AAA-type, core , Aspartate decarboxylase-like fold , ATPase, AAA-type, conserved site , Peroxisome biogenesis factor 1, N-terminal | BEST Arabidopsis thaliana protein match is: ATPase, AAA-type, CDC48 protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007031
IEA
InterProperoxisome organization
GO:0016558
ISO
PLAZA Integrative Orthologyprotein import into peroxisome matrix AT5G08470
GO:0006635
ISO
PLAZA Integrative Orthologyfatty acid beta-oxidation AT5G08470

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G08470

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005777
IEA
InterProperoxisome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009010 Aspartate decarboxylase-like domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR041569 AAA ATPase, AAA+ lid domain
IPR029067 CDC48 domain 2-like superfamily
IPR015342 Peroxisome biogenesis factor 1, N-terminal, psi beta-barrel fold
IPR003959 ATPase, AAA-type, core
IPR003593 AAA+ ATPase domain
Mapman id Description
23.4.1.5.1.1 Protein translocation.peroxisome.importomer translocation system.receptor export system.Pex1-Pex6 subcomplex.component Pex1