Gene: Solyc04g057960.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g057960.4
  • Transcript Identifier Solyc04g057960.4.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 54386904-54406633 : negative

Gene Family Information

  • ID HOM05D000070
  • #Genes/#Species 3945/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g057960.4.1
  • uniprot A0A3Q7G2Y1
  • gene_id Solyc04g057960

Descriptions

  • Description Peroxisome biogenesis protein 1 (AHRD V3.3 *** A0A1U8F2X9_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007031
IEA
GOA Databaseperoxisome organization
GO:0007031
IEA
InterProperoxisome organization
GO:0016558
IBA
GOA Databaseprotein import into peroxisome matrix
GO:0006635
ISO
PLAZA Integrative Orthologyfatty acid beta-oxidation AT5G08470

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G08470

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005777
IEA
GOA Databaseperoxisome
GO:0005777
IEA
InterProperoxisome
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005778
IBA
GOA Databaseperoxisomal membrane
GO:0005829
IBA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009010 Aspartate decarboxylase-like domain superfamily
IPR015342 Peroxisome biogenesis factor 1, N-terminal, psi beta-barrel fold
IPR003593 AAA+ ATPase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR029067 CDC48 domain 2-like superfamily
IPR041569 AAA ATPase, AAA+ lid domain
IPR003959 ATPase, AAA-type, core
Mapman id Description
23.4.1.5.1.1 Protein translocation.peroxisome.importomer translocation system.receptor export system.Pex1-Pex6 subcomplex.component Pex1