Gene: COL.COLO4_30925
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_30925
- Transcript Identifier COL.rna29640
- Gene Type Coding gene
- Location AWUE01020797.1 : 25907-33194 : positive
Gene Family Information
- ID HOM05D000070
- #Genes/#Species 3945/100
- Phylogenetic origin
- ID ORTHO05D006627
- #Genes/#Species 140/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna29640
- GenBank OMO65915.1
- id gene30897
- gene_name COLO4_30925
- uniprot A0A1R3H6C6
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007031 | IEA | GOA Database | peroxisome organization | |
| GO:0007031 | IEA | InterPro | peroxisome organization | |
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0016558 | ISO | PLAZA Integrative Orthology | protein import into peroxisome matrix | AT5G08470 |
| GO:0006635 | ISO | PLAZA Integrative Orthology | fatty acid beta-oxidation | AT5G08470 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G08470 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005777 | IEA | GOA Database | peroxisome | |
| GO:0005777 | IEA | InterPro | peroxisome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003959 | ATPase, AAA-type, core |
| IPR015342 | Peroxisome biogenesis factor 1, N-terminal, psi beta-barrel fold |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR029067 | CDC48 domain 2-like superfamily |
| IPR009010 | Aspartate decarboxylase-like domain superfamily |
| IPR041569 | AAA ATPase, AAA+ lid domain |
| IPR003593 | AAA+ ATPase domain |
| Mapman id | Description |
|---|---|
| 23.4.1.5.1.1 | Protein translocation.peroxisome.importomer translocation system.receptor export system.Pex1-Pex6 subcomplex.component Pex1 |