Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G25270 Trifolium pratense HOM05D004503 ORTHO05D005460 2.6e-32 141.4 67 100.0
TPR.G6024 Trifolium pratense HOM05D004503 ORTHO05D005460 2.6e-32 141.4 67 100.0
Ca_14599_v3 Cicer arietinum L. HOM05D004503 ORTHO05D005460 5.8e-32 140.2 67 98.5
Medtr0071s0030 Medicago truncatula HOM05D004503 ORTHO05D005460 5.8e-32 140.2 67 98.5
Medtr3g046640 Medicago truncatula HOM05D004503 ORTHO05D005460 5.8e-32 140.2 67 98.5
Psat5g185680 Pisum sativum HOM05D004503 ORTHO05D005460 5.8e-32 140.2 67 98.5
Glyma.08G307900 Glycine max HOM05D004503 ORTHO05D005460 3.8e-31 137.5 67 95.5
Glyma.18G109800 Glycine max HOM05D004503 ORTHO05D005460 3.8e-31 137.5 67 95.5
VMungo0647G0468 Vigna mungo HOM05D004503 ORTHO05D005460 8.4e-31 136.3 67 95.5
CANSAT64G0633 Cannabis sativa HOM05D004503 ORTHO05D005460 1.1e-30 136.0 67 94.0
Lj6g0014906 Lotus japonicus HOM05D004503 ORTHO05D005460 1.4e-30 135.6 67 94.0
Phvul.006G022400 Phaseolus vulgaris HOM05D004503 ORTHO05D005460 1.9e-30 135.2 67 94.0
arahy.Tifrunner.gnm1.ann1.96CX7H Arachis hypogaea HOM05D004503 ORTHO05D005460 4.2e-30 134.0 67 92.5
arahy.Tifrunner.gnm1.ann1.S01VYL Arachis hypogaea HOM05D004503 ORTHO05D005460 4.2e-30 134.0 67 92.5
Lalb_Chr07g0191281 Lupinus albus HOM05D004503 ORTHO05D005460 4.2e-30 134.0 67 92.5
Atru.chr6.2055 Acer truncatum HOM05D004503 ORTHO05D005460 5.4e-30 133.7 67 91.0
Actinidia12541 Actinidia chinensis HOM05D004503 ORTHO05D005460 5.4e-30 133.7 67 91.0
PGR042G1526 Punica granatum HOM05D004503 ORTHO05D005460 5.4e-30 133.7 67 91.0
TWI14G0297 Tripterygium wilfordii HOM05D004503 ORTHO05D005460 5.4e-30 133.7 67 91.0
TAR629G1355 Trochodendron aralioides HOM05D004503 ORTHO05D005460 7.1e-30 133.3 67 91.0
Dinv07955 Davidia involucrata HOM05D004503 ORTHO05D005460 1.2e-29 132.5 67 89.6
Duzib138G1342 Durio zibethinus HOM05D004503 ORTHO05D005460 1.2e-29 132.5 67 89.6
MBI10_g21107_MAGBIO Magnolia biondii HOM05D004503 ORTHO05D005460 1.2e-29 132.5 67 89.6
QL01p017640 Quercus lobata HOM05D004503 ORTHO05D005460 1.2e-29 132.5 67 89.6
Cpa.g.sc648.4 Carica papaya HOM05D004503 ORTHO05D005460 1.6e-29 132.1 67 88.1
Cfa009838 Carpinus fangiana HOM05D004503 ORTHO05D005460 1.6e-29 132.1 67 88.1
Haze_23205 Corylus avellana HOM05D004503 ORTHO05D005460 1.6e-29 132.1 67 88.1
Lj1C677T5 Lonicera japonica HOM05D004503 ORTHO05D005460 1.6e-29 132.1 67 88.1
Prupe.3G176600 Prunus persica HOM05D004503 ORTHO05D005460 1.6e-29 132.1 67 89.6
Rhsim12G0009900 Rhododendron simsii HOM05D004503 ORTHO05D005460 1.6e-29 132.1 67 88.1
Thecc.01G170000 Theobroma cacao HOM05D004503 ORTHO05D005460 1.6e-29 132.1 67 88.1
DCAR_013322 Daucus carota HOM05D004503 ORTHO05D005460 2.1e-29 131.7 67 89.6
Sc09g0009430 Simmondsia chinensis HOM05D004503 ORTHO05D005460 2.1e-29 131.7 67 88.1
CSS0024997 Camellia sinensis var. sinensis HOM05D004503 ORTHO05D005460 2.7e-29 131.3 67 88.1
Cc05_g09730 Coffea canephora HOM05D004503 ORTHO05D005460 2.7e-29 131.3 67 88.1
CiPaw.13G152400 Carya illinoinensis HOM05D004503 ORTHO05D005460 3.5e-29 131.0 67 86.6
GSVIVG01020844001 Vitis vinifera HOM05D004503 ORTHO05D005460 3.5e-29 131.0 67 88.1
MD17G1136200 Malus domestica HOM05D004503 ORTHO05D005460 4.6e-29 130.6 67 86.6
Nitab4.5_0002251g0070 Nicotiana tabacum HOM05D004503 ORTHO05D005460 4.6e-29 130.6 67 86.6
Nitab4.5_0010124g0010 Nicotiana tabacum HOM05D004503 ORTHO05D005460 4.6e-29 130.6 67 86.6
Peaxi162Scf00111g00222 Petunia axillaris HOM05D004503 ORTHO05D005460 4.6e-29 130.6 67 86.6
Lsat_1_v5_gn_8_31680 Lactuca sativa HOM05D004503 ORTHO05D005460 6.0e-29 130.2 67 88.1
Manes.02G088300 Manihot esculenta HOM05D004503 ORTHO05D005460 6.0e-29 130.2 67 88.1
COL.COLO4_08894 Corchorus olitorius HOM05D004503 ORTHO05D005460 7.8e-29 129.8 67 86.6
FvH4_6g38590 Fragaria vesca HOM05D004503 ORTHO05D005460 7.8e-29 129.8 67 86.6
FAN02G3131 Fragaria x ananassa HOM05D004503 ORTHO05D005460 7.8e-29 129.8 67 86.6
FAN05G2445 Fragaria x ananassa HOM05D004503 ORTHO05D005460 7.8e-29 129.8 67 86.6
FAN14G5858 Fragaria x ananassa HOM05D004503 ORTHO05D005460 7.8e-29 129.8 67 86.6
FAN09G1308 Fragaria x ananassa HOM05D004503 ORTHO05D005460 1.0e-28 129.4 67 86.6
RcHm_v2.0_Chr2g0152001 Rosa chinensis HOM05D004503 ORTHO05D005460 1.0e-28 129.4 67 85.1
THA.LOC104826541 Tarenaya hassleriana HOM05D004503 ORTHO05D005460 1.0e-28 129.4 67 86.6
Gohir.A07G183000 Gossypium hirsutum HOM05D004503 ORTHO05D005460 1.3e-28 129.0 67 88.1
Gohir.D07G189800 Gossypium hirsutum HOM05D004503 ORTHO05D005460 1.7e-28 128.6 67 86.6
Gorai.001G211500 Gossypium raimondii HOM05D004503 ORTHO05D005460 1.7e-28 128.6 67 86.6
Hund26670 Selenicereus undatus HOM05D004503 ORTHO05D005460 1.7e-28 128.6 67 86.6
Solyc07g056220.3 Solanum lycopersicum HOM05D004503 ORTHO05D005460 1.7e-28 128.6 67 85.1
Sopen07g029580 Solanum pennellii HOM05D004503 ORTHO05D005460 1.7e-28 128.6 67 85.1
Aqoxy1G01732 Aquilegia oxysepala HOM05D004503 ORTHO05D005460 3.0e-28 127.9 67 85.1
ClCG11G016490 Citrullus lanatus HOM05D004503 ORTHO05D005460 3.0e-28 127.9 67 85.1
Migut.M00558 Erythranthe guttata HOM05D004503 ORTHO05D005460 3.0e-28 127.9 67 86.6
Potri.002G057800 Populus trichocarpa HOM05D004503 ORTHO05D005460 3.0e-28 127.9 67 88.1
AUR62026613 Chenopodium quinoa HOM05D004503 ORTHO05D005460 6.6e-28 126.7 67 86.6
Ciclev10030701m.g Citrus clementina HOM05D004503 ORTHO05D005460 6.6e-28 126.7 67 83.6
MELO3C026971.2 Cucumis melo HOM05D004503 ORTHO05D005460 6.6e-28 126.7 67 83.6
CsaV3_4G031940 Cucumis sativus L. HOM05D004503 ORTHO05D005460 6.6e-28 126.7 67 83.6
SGA_v2.0_scaffold70G23615 Striga asiatica HOM05D004503 ORTHO05D005460 6.6e-28 126.7 67 85.1
CAN.G585.22 Capsicum annuum HOM05D004503 ORTHO05D005460 8.7e-28 126.3 67 83.6
ECA233G4498 Erigeron canadensis HOM05D004503 ORTHO05D005460 1.1e-27 125.9 67 88.1
Sabra05G0155000 Salix brachista HOM05D004503 ORTHO05D005460 1.1e-27 125.9 67 83.6
EL10Ac1g01630 Beta vulgaris HOM05D004503 ORTHO05D005460 1.9e-27 125.2 67 83.6
HanXRQChr13g0387771 Helianthus annuus HOM05D004503 ORTHO05D005460 1.9e-27 125.2 67 85.1
Potri.005G204400 Populus trichocarpa HOM05D004503 ORTHO05D005460 1.9e-27 125.2 67 83.6
MSTRG.6739 Avicennia marina HOM05D004503 ORTHO05D005460 5.6e-27 123.6 67 82.1
Ah.05g168350 Amaranthus hybridus HOM05D004503 ORTHO05D005460 9.6e-27 122.9 67 83.6
CDE04G0954 Ceratophyllum demersum HOM05D004503 ORTHO05D005460 1.3e-26 122.5 67 82.1
HanXRQChr13g0403751 Helianthus annuus HOM05D004503 ORTHO05D005460 1.6e-26 122.1 65 84.6
Nn4g24335 Nelumbo nucifera HOM05D004503 ORTHO05D005460 1.6e-26 122.1 67 82.1
Oeu020048.5 Olea europaea HOM05D004503 ORTHO05D005460 1.6e-26 122.1 67 82.1
vmacro08730 Vaccinium macrocarpon HOM05D004503 ORTHO05D005460 2.1e-26 121.7 83 71.1
AL4G35000 Arabidopsis lyrata HOM05D004503 ORTHO05D005460 2.8e-26 121.3 67 82.1
AT2G38020 Arabidopsis thaliana HOM05D004503 ORTHO05D005460 2.8e-26 121.3 67 82.1
Carub.0004s1999 Capsella rubella HOM05D004503 ORTHO05D005460 2.8e-26 121.3 67 82.1
Sed0003027 Sechium edule HOM05D004503 ORTHO05D005460 2.8e-26 121.3 67 83.6
AUR62034921 Chenopodium quinoa HOM05D004503 ORTHO05D005460 3.6e-26 120.9 67 82.1
Aa31LG5G23690 Aethionema arabicum HOM05D004503 ORTHO05D005460 8.1e-26 119.8 67 79.1
AL3G43330 Arabidopsis lyrata HOM05D004503 ORTHO05D005460 1.4e-25 119.0 67 80.6
BcaB01g03734 Brassica carinata HOM05D004503 ORTHO05D005460 1.8e-25 118.6 67 80.6
BcaC01g05572 Brassica carinata HOM05D004503 ORTHO05D005460 1.8e-25 118.6 67 80.6
BcaC01g05574 Brassica carinata HOM05D004503 ORTHO05D005460 1.8e-25 118.6 67 80.6
A03p21010 Brassica napus HOM05D004503 ORTHO05D005460 1.8e-25 118.6 67 80.6
C03p24750 Brassica napus HOM05D004503 ORTHO05D005460 1.8e-25 118.6 67 80.6
BolC3t14864H Brassica oleracea HOM05D004503 ORTHO05D005460 1.8e-25 118.6 67 80.6
BraA03t11340Z Brassica rapa HOM05D004503 ORTHO05D005460 1.8e-25 118.6 67 80.6
Sp4g20340 Schrenkiella parvula HOM05D004503 ORTHO05D005460 1.8e-25 118.6 67 80.6
PSO675G5402 Papaver somniferum HOM05D004503 ORTHO05D005460 2.4e-25 118.2 67 80.6
ATR0772G123 Amborella trichopoda HOM05D004503 ORTHO05D005460 1.5e-24 115.5 67 77.6
HPP92_024256 Vanilla planifolia HOM05D004503 ORTHO05D005460 1.5e-24 115.5 67 74.6
HPP92_024264 Vanilla planifolia HOM05D004503 ORTHO05D005460 1.5e-24 115.5 67 74.6
Thhalv10016232m.g Eutrema salsugineum HOM05D004503 ORTHO05D005460 2.0e-24 115.2 67 79.1
SEGI_01586 Sequoiadendron giganteum HOM05D004503 ORTHO05D005460 7.6e-24 113.2 67 77.6
CARHR132590 Cardamine hirsuta HOM05D004503 ORTHO05D005460 9.9e-24 112.8 67 79.1
Mapoly0052s0038 Marchantia polymorpha HOM05D004503 ORTHO05D005460 1.7e-23 112.1 67 74.6
PGR042G2164 Punica granatum HOM05D004503 ORTHO05D005460 4.2e-22 107.5 54 87.0
Pp3c13_19740 Physcomitrium patens HOM05D004503 ORTHO05D005460 1.6e-21 105.5 67 71.6
Os01g0666800 Oryza sativa ssp. japonica HOM05D004503 ORTHO05D005460 2.1e-21 105.1 67 68.7
SMO358G0621 Selaginella moellendorffii HOM05D004503 ORTHO05D005460 4.6e-21 104.0 67 68.7
CBR_g46726 Chara braunii HOM05D004503 ORTHO05D005460 3.6e-18 94.4 67 62.7
AagrBONN_evm.TU.Sc2ySwM_117.438 Anthoceros agrestis HOM05D004503 ORTHO05D005460 1.1e-17 92.8 67 61.2
AagrBONN_evm.TU.Sc2ySwM_368.859 Anthoceros agrestis HOM05D004503 ORTHO05D005460 1.1e-17 92.8 67 61.2
BcaNung06337 Brassica carinata HOM05D004503 ORTHO05D005460 2.8e-10 68.2 33 87.9


User provided reference genes

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