Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G5917 Trifolium pratense HOM05D001734 ORTHO05D003483 6.5e-31 136.7 68 100.0
TPR.G6095 Trifolium pratense HOM05D001734 ORTHO05D003483 9.4e-30 132.9 67 97.0
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 3.9e-28 127.5 67 94.0
Ca_16175_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 2.6e-27 124.8 67 91.0
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 9.7e-27 122.9 67 89.6
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 6.3e-26 120.2 67 86.6
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 9.1e-25 116.3 67 82.1
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 9.1e-25 116.3 65 86.2
Lalb_Chr08g0236521 Lupinus albus HOM05D001734 ORTHO05D003483 1.3e-23 112.5 68 85.3
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 5.7e-19 97.1 67 70.1
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 7.5e-19 96.7 67 68.7
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 9.7e-19 96.3 67 68.7
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 2.8e-18 94.7 63 71.4
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 3.7e-18 94.4 67 65.7
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 4.8e-18 94.0 67 65.7
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 4.8e-18 94.0 67 65.7
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 6.3e-18 93.6 67 64.2
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 8.3e-18 93.2 67 64.2
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 8.3e-18 93.2 67 65.7
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 8.3e-18 93.2 67 64.2
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 1.4e-17 92.4 67 62.7
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 1.4e-17 92.4 67 64.2
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 1.4e-17 92.4 66 65.2
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 1.8e-17 92.0 65 67.7
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 1.8e-17 92.0 67 65.7
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 9.1e-17 89.7 67 64.2
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 1.6e-16 89.0 67 64.2
FAN05G0227 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.6e-16 89.0 67 64.2
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.6e-16 89.0 67 64.2
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 1.6e-16 89.0 67 62.7
VMungo1309G1926 Vigna mungo HOM05D000002 ORTHO05D000001 2.0e-16 88.6 142 41.5
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 4.5e-16 87.4 67 62.7
Gohir.A09G171650 Gossypium hirsutum HOM05D001734 ORTHO05D003483 5.9e-16 87.0 63 68.3
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 7.7e-16 86.7 63 66.7
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 1.3e-15 85.9 63 65.1
CSS0012833 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 1.7e-15 85.5 67 61.2
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 1.7e-15 85.5 63 66.7
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 2.2e-15 85.1 67 62.7
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 2.2e-15 85.1 67 59.7
vmacro19389 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 2.2e-15 85.1 63 60.3
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 2.9e-15 84.7 65 61.5
TAR629G2960 Trochodendron aralioides HOM05D001734 ORTHO05D003483 5.0e-15 84.0 67 61.2
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 1.9e-14 82.0 59 61.0
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 3.2e-14 81.3 61 65.6
Peaxi162Scf00009g00112 Petunia axillaris HOM05D001734 ORTHO05D003483 3.2e-14 81.3 67 56.7
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 3.2e-14 81.3 67 58.2
Rhsim08G0157900 Rhododendron simsii HOM05D001734 ORTHO05D003483 4.2e-14 80.9 62 58.1
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 5.5e-14 80.5 63 58.7
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 9.4e-14 79.7 63 63.5
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 9.4e-14 79.7 59 61.0
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 9.4e-14 79.7 63 58.7
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 1.6e-13 79.0 63 61.9
Rhsim08G0172200 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.6e-13 79.0 62 58.1
SHI17017 Sapria himalayana HOM05D001734 ORTHO05D003483 2.1e-13 78.6 64 56.2
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 2.7e-13 78.2 63 65.1
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 3.6e-13 77.8 63 60.3
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 6.1e-13 77.0 66 53.0
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 1.4e-12 75.9 63 57.1
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 1.4e-12 75.9 61 62.3
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 1.4e-12 75.9 63 61.9
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 1.8e-12 75.5 63 61.9
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 2.3e-12 75.1 65 52.3
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 5.2e-12 73.9 67 52.2
Lj9A448T39 Lonicera japonica HOM05D001734 ORTHO05D003483 6.8e-12 73.6 72 55.6
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 1.2e-11 72.8 67 50.7
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 2.0e-11 72.0 67 49.3
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 2.6e-11 71.6 59 55.9
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 2.6e-11 71.6 66 50.0
CAN.G1305.20 Capsicum annuum HOM05D001734 ORTHO05D003483 4.4e-11 70.9 65 55.4
BcaNung06699 Brassica carinata HOM05D001734 ORTHO05D003483 1.7e-10 68.9 57 63.2
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 1.7e-10 68.9 57 63.2
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 1.7e-10 68.9 57 63.2
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 1.7e-10 68.9 57 63.2
BraA06t25686Z Brassica rapa HOM05D001734 ORTHO05D003483 1.7e-10 68.9 57 63.2
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 2.2e-10 68.6 65 47.7
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 4.8e-10 67.4 68 47.1
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 4.8e-10 67.4 65 49.2
COL.COLO4_30229 Corchorus olitorius HOM05D001734 ORTHO05D003483 1.4e-09 65.9 54 61.1
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 2.4e-09 65.1 63 55.6
Cc04_g14140 Coffea canephora HOM05D001734 ORTHO05D003483 5.4e-09 63.9 67 44.8
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 1.2e-08 62.8 66 45.5
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 1.6e-08 62.4 65 43.1
PSO732G0258 Papaver somniferum HOM05D001734 ORTHO05D003483 5.9e-08 60.5 55 58.2
ATR0730G017 Amborella trichopoda HOM05D001734 ORTHO05D003483 2.9e-07 58.2 64 40.6
SEGI_17988 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 3.3e-06 54.7 63 38.1
HPP92_004845 Vanilla planifolia HOM05D002152 ORTHO05D003483 4.2e-06 54.3 63 42.9


User provided reference genes

Program Settings