Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G4740 Trifolium pratense HOM05D006373 ORTHO05D008145 1.0e-51 206.5 102 100.0
Lalb_Chr01g0021121 Lupinus albus HOM05D006373 ORTHO05D008145 2.4e-37 158.7 89 87.6
arahy.Tifrunner.gnm1.ann1.V9KE7M Arachis hypogaea HOM05D006373 ORTHO05D008145 5.9e-36 154.1 90 84.4
arahy.Tifrunner.gnm1.ann1.TZ2CHG Arachis hypogaea HOM05D006373 ORTHO05D008145 7.7e-36 153.7 90 84.4
Medtr7g076290 Medicago truncatula HOM05D006373 ORTHO05D008145 7.7e-36 153.7 89 85.4
Ca_07867_v3 Cicer arietinum L. HOM05D006373 ORTHO05D008145 6.5e-35 150.6 91 83.5
Psat3g112440 Pisum sativum HOM05D006373 ORTHO05D008145 3.2e-34 148.3 89 84.3
Cfa004178 Carpinus fangiana HOM05D006373 ORTHO05D008145 5.5e-34 147.5 89 78.7
Haze_15231 Corylus avellana HOM05D006373 ORTHO05D008145 8.0e-33 143.7 89 78.7
Lj1g0016698 Lotus japonicus HOM05D006373 ORTHO05D008145 1.0e-32 143.3 89 80.9
Migut.B01684 Erythranthe guttata HOM05D006373 ORTHO05D008145 1.4e-32 142.9 89 74.2
Cc02_g37210 Coffea canephora HOM05D006373 ORTHO05D008145 1.5e-31 139.4 89 73.0
vmacro20974 Vaccinium macrocarpon HOM05D006373 ORTHO05D008145 4.4e-31 137.9 91 70.3
CANSAT56G4468 Cannabis sativa HOM05D006373 ORTHO05D008145 7.5e-31 137.1 89 74.2
CiPaw.02G024800 Carya illinoinensis HOM05D006373 ORTHO05D008145 1.3e-30 136.3 89 71.9
DCAR_025171 Daucus carota HOM05D006373 ORTHO05D008145 1.7e-30 136.0 89 70.8
Manes.01G262700 Manihot esculenta HOM05D006373 ORTHO05D008145 2.8e-30 135.2 89 73.0
Rhsim01G0155400 Rhododendron simsii HOM05D006373 ORTHO05D008145 3.7e-30 134.8 89 70.8
Glyma.18G228000 Glycine max HOM05D006373 ORTHO05D008145 4.8e-30 134.4 90 75.6
MD07G1125800 Malus domestica HOM05D006373 ORTHO05D008145 4.8e-30 134.4 89 74.2
Actinidia33446 Actinidia chinensis HOM05D006373 ORTHO05D008145 6.3e-30 134.0 89 69.7
Prupe.2G154000 Prunus persica HOM05D006373 ORTHO05D008145 8.3e-30 133.7 89 71.9
SalBow3G0067 Salvia bowleyana HOM05D006373 ORTHO05D008145 8.3e-30 133.7 89 68.5
SGA_v2.0_scaffold153G37065 Striga asiatica HOM05D006373 ORTHO05D008145 8.3e-30 133.7 89 70.8
HanXRQChr03g0093561 Helianthus annuus HOM05D006373 ORTHO05D008145 1.4e-29 132.9 89 70.8
QL08p050698 Quercus lobata HOM05D006373 ORTHO05D008145 1.8e-29 132.5 89 71.9
CSS0009190 Camellia sinensis var. sinensis HOM05D006373 ORTHO05D008145 3.1e-29 131.7 89 69.7
Lj7A521G13 Lonicera japonica HOM05D006373 ORTHO05D008145 3.1e-29 131.7 89 69.7
Nitab4.5_0004550g0010 Nicotiana tabacum HOM05D006373 ORTHO05D008145 3.1e-29 131.7 89 69.7
Phvul.008G070200 Phaseolus vulgaris HOM05D006373 ORTHO05D008145 4.1e-29 131.3 90 76.7
Potri.014G077300 Populus trichocarpa HOM05D006373 ORTHO05D008145 4.1e-29 131.3 90 74.4
Dinv32419 Davidia involucrata HOM05D006373 ORTHO05D008145 5.4e-29 131.0 89 69.7
ECA240G2884 Erigeron canadensis HOM05D006373 ORTHO05D008145 7.0e-29 130.6 88 71.6
FvH4_7g12990 Fragaria vesca HOM05D006373 ORTHO05D008145 9.1e-29 130.2 89 71.9
RcHm_v2.0_Chr1g0352131 Rosa chinensis HOM05D006373 ORTHO05D008145 1.6e-28 129.4 91 71.4
GSVIVG01027599001 Vitis vinifera HOM05D006373 ORTHO05D008145 2.7e-28 128.6 89 71.9
THA.LOC104801460 Tarenaya hassleriana HOM05D006373 ORTHO05D008145 3.5e-28 128.3 89 70.8
FAN03G2318 Fragaria x ananassa HOM05D006373 ORTHO05D008145 4.5e-28 127.9 89 70.8
TAR375G0714 Trochodendron aralioides HOM05D006373 ORTHO05D008145 4.5e-28 127.9 89 66.3
TPR.G33174 Trifolium pratense HOM05D006373 ORTHO05D008145 5.9e-28 127.5 70 88.6
Ah.05g176000 Amaranthus hybridus HOM05D006373 ORTHO05D008145 7.7e-28 127.1 90 70.0
FAN01G2011 Fragaria x ananassa HOM05D006373 ORTHO05D008145 7.7e-28 127.1 89 69.7
FAN06G0518 Fragaria x ananassa HOM05D006373 ORTHO05D008145 7.7e-28 127.1 89 70.8
AT1G01880 Arabidopsis thaliana HOM05D006373 ORTHO05D008145 1.0e-27 126.7 89 70.8
Thecc.01G369000 Theobroma cacao HOM05D006373 ORTHO05D008145 1.0e-27 126.7 89 69.7
VMungo1383G2252 Vigna mungo HOM05D006373 ORTHO05D008145 1.3e-27 126.3 90 73.3
Sc23g0003310 Simmondsia chinensis HOM05D006373 ORTHO05D008145 1.7e-27 125.9 89 69.7
Lsat_1_v5_gn_3_135660 Lactuca sativa HOM05D006373 ORTHO05D008145 2.3e-27 125.6 89 69.7
Eucgr.E00282 Eucalyptus grandis HOM05D006373 ORTHO05D008145 2.9e-27 125.2 91 65.9
FAN10G2811 Fragaria x ananassa HOM05D006373 ORTHO05D008145 2.9e-27 125.2 89 69.7
Aqoxy7G00462 Aquilegia oxysepala HOM05D006373 ORTHO05D008145 3.8e-27 124.8 89 62.9
PGSC0003DMG400017049 Solanum tuberosum HOM05D006373 ORTHO05D008145 3.8e-27 124.8 89 66.3
Thhalv10007143m.g Eutrema salsugineum HOM05D006373 ORTHO05D008145 6.5e-27 124.0 89 68.5
Peaxi162Scf00021g00529 Petunia axillaris HOM05D006373 ORTHO05D008145 6.5e-27 124.0 80 73.8
CARHR000470 Cardamine hirsuta HOM05D006373 ORTHO05D008145 8.6e-27 123.6 89 68.5
FAN10G3773 Fragaria x ananassa HOM05D006373 ORTHO05D008145 8.6e-27 123.6 89 68.5
Solyc01g091820.3 Solanum lycopersicum HOM05D006373 ORTHO05D008145 8.6e-27 123.6 89 65.2
Sopen01g037590 Solanum pennellii HOM05D006373 ORTHO05D008145 8.6e-27 123.6 89 65.2
TPR.G37746 Trifolium pratense HOM05D006373 ORTHO05D008145 8.6e-27 123.6 64 93.8
Aa31LG1G11190 Aethionema arabicum HOM05D006373 ORTHO05D008145 1.1e-26 123.2 89 66.3
MSTRG.20789 Avicennia marina HOM05D006373 ORTHO05D008145 1.1e-26 123.2 89 67.4
Carub.0001s0035 Capsella rubella HOM05D006373 ORTHO05D008145 1.1e-26 123.2 89 68.5
Nn6g34269 Nelumbo nucifera HOM05D006373 ORTHO05D008145 1.1e-26 123.2 89 68.5
EL10Ac1g00966 Beta vulgaris HOM05D006373 ORTHO05D008145 1.9e-26 122.5 92 66.3
Oeu059230.1 Olea europaea HOM05D006373 ORTHO05D008145 1.9e-26 122.5 90 66.7
Sed0002578 Sechium edule HOM05D006373 ORTHO05D008145 1.9e-26 122.5 89 65.2
PSO478G1066 Papaver somniferum HOM05D006373 ORTHO05D008145 2.5e-26 122.1 89 62.9
PGR042G0347 Punica granatum HOM05D006373 ORTHO05D008145 2.5e-26 122.1 89 67.4
MELO3C022527.2 Cucumis melo HOM05D006373 ORTHO05D008145 4.2e-26 121.3 89 65.2
Hma1.2p1_0068F.1_g037130 Hydrangea macrophylla HOM05D006373 ORTHO05D008145 5.5e-26 120.9 90 67.8
PSO782G5614 Papaver somniferum HOM05D006373 ORTHO05D008145 5.5e-26 120.9 89 61.8
Duzib133G1433 Durio zibethinus HOM05D006373 ORTHO05D008145 9.5e-26 120.2 91 63.7
Glyma.09G264000 Glycine max HOM05D006373 ORTHO05D008145 1.2e-25 119.8 84 73.8
CAN.G170.53 Capsicum annuum HOM05D006373 ORTHO05D008145 1.6e-25 119.4 89 64.0
TWI59G0120 Tripterygium wilfordii HOM05D006373 ORTHO05D008145 2.8e-25 118.6 89 61.8
ClCG06G000110 Citrullus lanatus HOM05D006373 ORTHO05D008145 3.6e-25 118.2 89 62.9
Hund27327 Selenicereus undatus HOM05D006373 ORTHO05D008145 3.6e-25 118.2 90 64.4
COL.COLO4_06964 Corchorus olitorius HOM05D006373 ORTHO05D008145 4.7e-25 117.9 89 65.2
Ciclev10019320m.g Citrus clementina HOM05D006373 ORTHO05D008145 6.1e-25 117.5 90 66.7
Sp1g00420 Schrenkiella parvula HOM05D006373 ORTHO05D008145 8.0e-25 117.1 89 65.2
Gohir.A08G129300 Gossypium hirsutum HOM05D006373 ORTHO05D008145 1.0e-24 116.7 89 61.8
Atru.chr5.401 Acer truncatum HOM05D006373 ORTHO05D008145 1.4e-24 116.3 89 66.3
Gohir.D08G150600 Gossypium hirsutum HOM05D006373 ORTHO05D008145 5.2e-24 114.4 89 60.7
AUR62033368 Chenopodium quinoa HOM05D006373 ORTHO05D008145 6.8e-24 114.0 92 62.0
BraA09t42266Z Brassica rapa HOM05D006373 ORTHO05D008145 8.9e-24 113.6 90 65.6
Gorai.004G156300 Gossypium raimondii HOM05D006373 ORTHO05D008145 1.2e-23 113.2 89 59.6
FAN06G4951 Fragaria x ananassa HOM05D006373 ORTHO05D008145 3.4e-23 111.7 118 53.4
CDE04G1904 Ceratophyllum demersum HOM05D006373 ORTHO05D008145 7.5e-23 110.5 89 59.6
C08p53900 Brassica napus HOM05D006373 ORTHO05D008145 1.3e-22 109.8 90 64.4
BolC8t52903H Brassica oleracea HOM05D006373 ORTHO05D008145 1.3e-22 109.8 90 64.4
Sabra14G0055000 Salix brachista HOM05D006373 ORTHO05D008145 1.2e-20 103.2 67 76.1
Zm00001eb103090 Zea mays HOM05D006373 ORTHO05D008145 3.5e-20 101.7 98 53.1
Zm00001eb318880 Zea mays HOM05D006373 ORTHO05D008145 4.5e-20 101.3 98 53.1
ATR0757G016 Amborella trichopoda HOM05D006373 ORTHO05D008145 1.3e-19 99.8 89 55.1
SHI25519 Sapria himalayana HOM05D006373 ORTHO05D000610 9.5e-18 93.6 91 52.7
Os09g0521900 Oryza sativa ssp. japonica HOM05D006373 ORTHO05D008145 1.2e-17 93.2 97 49.5
HPP92_004956 Vanilla planifolia HOM05D006373 ORTHO05D008145 2.3e-16 89.0 80 57.5
MBI12_g11810_MAGBIO Magnolia biondii HOM05D006373 ORTHO05D008145 2.9e-14 82.0 62 59.7
SEGI_25157 Sequoiadendron giganteum HOM05D006373 ORTHO05D008145 8.3e-14 80.5 89 44.9
Lsat_1_v5_gn_4_13460 Lactuca sativa HOM05D001376 ORTHO05D004383 1.8e-13 79.3 60 65.0
Mapoly0022s0105 Marchantia polymorpha HOM05D006373 ORTHO05D008145 6.0e-12 74.3 93 46.2
MD08G1041100 Malus domestica HOM05D006373 ORTHO05D008145 1.2e-09 66.6 76 50.0
SHI10437 Sapria himalayana HOM05D006373 ORTHO05D008145 1.1e-08 63.5 81 49.4
SMO351G0379 Selaginella moellendorffii HOM05D006373 ORTHO05D008145 1.4e-08 63.2 84 48.8
Pp3c12_11380 Physcomitrium patens HOM05D006373 ORTHO05D008145 4.4e-07 58.2 93 37.6


User provided reference genes

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