Gene: Pp3c12_11380

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c12_11380
  • Transcript Identifier Pp3c12_11380V3.1
  • Gene Type Coding gene
  • Location Chr12 : 7587421-7590970 : positive

Gene Family Information

  • ID HOM05D006373
  • #Genes/#Species 125/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c12_11380V3.1
  • pacid 32973584
  • alias Phpat.012G042100
  • alias Pp1s391_28V6
  • alias Phypa_1948
  • uniprot A0A2K1JQP9

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009555
ISO
PLAZA Integrative Orthologypollen development Os09g0521900
GO:0009650
ISO
PLAZA Integrative OrthologyUV protection AT1G01880
GO:0006259
IEA
GOA DatabaseDNA metabolic process
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003697
ISO
PLAZA Integrative Orthologysingle-stranded DNA binding Os09g0521900
GO:0008821
ISO
PLAZA Integrative Orthologycrossover junction endodeoxyribonuclease activity AT1G01880
GO:0003690
ISO
PLAZA Integrative Orthologydouble-stranded DNA binding Os09g0521900
GO:0048256
ISO
PLAZA Integrative Orthologyflap endonuclease activity Os09g0521900
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding Os09g0521900
GO:0017108
IBA
GOA Database5'-flap endonuclease activity
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004518
IEA
InterPronuclease activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os09g0521900

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006086 XPG-I domain
IPR006085 XPG, N-terminal
IPR029060 PIN-like domain superfamily
IPR006084 XPG/Rad2 endonuclease
IPR036279 5'-3' exonuclease, C-terminal domain superfamily
IPR008918 Helix-hairpin-helix motif, class 2
Mapman id Description
13.3.5.5.2.3 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.Holliday junction resolvase (GEN1)