Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G40375 Trifolium pratense HOM05D003924 ORTHO05D005216 8.0e-39 163.3 84 100.0
TPR.G31980 Trifolium pratense HOM05D003924 ORTHO05D005216 2.6e-29 131.7 105 70.5
Psat1g019320 Pisum sativum HOM05D003924 ORTHO05D005216 5.8e-29 130.6 105 69.5
Medtr2g048630 Medicago truncatula HOM05D003924 ORTHO05D005216 7.5e-29 130.2 72 90.3
Ca_02521_v3 Cicer arietinum L. HOM05D003924 ORTHO05D005216 9.8e-29 129.8 72 88.9
VMungo1309G1679 Vigna mungo HOM05D003924 ORTHO05D005216 1.7e-28 129.0 78 83.3
Lj6g0026487 Lotus japonicus HOM05D003924 ORTHO05D005216 2.2e-28 128.6 72 87.5
Glyma.09G087900 Glycine max HOM05D003924 ORTHO05D005216 4.9e-28 127.5 72 84.7
Lalb_Chr11g0073411 Lupinus albus HOM05D003924 ORTHO05D005216 4.9e-28 127.5 76 84.2
Phvul.009G216500 Phaseolus vulgaris HOM05D003924 ORTHO05D005216 4.9e-28 127.5 72 86.1
Glyma.15G194000 Glycine max HOM05D003924 ORTHO05D005216 6.4e-28 127.1 72 86.1
MD01G1113500 Malus domestica HOM05D003924 ORTHO05D005216 9.2e-27 123.2 72 83.3
arahy.Tifrunner.gnm1.ann1.VLH7KT Arachis hypogaea HOM05D003924 ORTHO05D005216 1.2e-26 122.9 69 85.5
Manes.07G101600 Manihot esculenta HOM05D003924 ORTHO05D005216 1.2e-26 122.9 72 83.3
arahy.Tifrunner.gnm1.ann1.MQZ1GR Arachis hypogaea HOM05D003924 ORTHO05D005216 2.0e-26 122.1 69 84.1
MD07G1181100 Malus domestica HOM05D003924 ORTHO05D005216 4.6e-26 120.9 72 81.9
Prupe.2G220200 Prunus persica HOM05D003924 ORTHO05D005216 6.0e-26 120.6 72 83.3
Hund16198 Selenicereus undatus HOM05D003924 ORTHO05D005216 7.8e-26 120.2 72 80.6
RcHm_v2.0_Chr3g0482831 Rosa chinensis HOM05D003924 ORTHO05D005216 1.0e-25 119.8 72 80.6
EL10Ac2g04495 Beta vulgaris HOM05D003924 ORTHO05D005216 1.7e-25 119.0 78 76.9
Eucgr.G02792 Eucalyptus grandis HOM05D003924 ORTHO05D005216 1.7e-25 119.0 71 80.3
FvH4_4g12630 Fragaria vesca HOM05D003924 ORTHO05D005216 1.7e-25 119.0 72 79.2
FAN12G0529 Fragaria x ananassa HOM05D003924 ORTHO05D005216 1.7e-25 119.0 72 79.2
FAN17G0927 Fragaria x ananassa HOM05D003924 ORTHO05D005216 1.7e-25 119.0 72 79.2
FAN22G0546 Fragaria x ananassa HOM05D003924 ORTHO05D005216 1.7e-25 119.0 72 79.2
Lalb_Chr08g0233271 Lupinus albus HOM05D003924 ORTHO05D005216 1.7e-25 119.0 72 83.3
PGR142G3475 Punica granatum HOM05D003924 ORTHO05D005216 1.7e-25 119.0 78 75.6
QL08p057163 Quercus lobata HOM05D003924 ORTHO05D005216 1.7e-25 119.0 72 77.8
Potri.008G045400 Populus trichocarpa HOM05D003924 ORTHO05D005216 2.3e-25 118.6 72 80.6
Potri.010G216100 Populus trichocarpa HOM05D003924 ORTHO05D005216 2.3e-25 118.6 109 60.6
Cpa.g.sc1.275 Carica papaya HOM05D003924 ORTHO05D005216 3.0e-25 118.2 72 77.8
Sabra10G0167200 Salix brachista HOM05D003924 ORTHO05D005216 3.9e-25 117.9 72 79.2
GSVIVG01016353001 Vitis vinifera HOM05D003924 ORTHO05D005216 3.9e-25 117.9 71 81.7
Sed0000671 Sechium edule HOM05D003924 ORTHO05D005216 5.0e-25 117.5 72 77.8
FAN07G1557 Fragaria x ananassa HOM05D003924 ORTHO05D005216 8.6e-25 116.7 72 77.8
Sabra08G0031600 Salix brachista HOM05D003924 ORTHO05D005216 1.1e-24 116.3 72 79.2
Sc10g0000900 Simmondsia chinensis HOM05D003924 ORTHO05D005216 1.5e-24 115.9 72 77.8
TWI15G1255 Tripterygium wilfordii HOM05D003924 ORTHO05D005216 1.5e-24 115.9 109 59.6
ClCG09G020390 Citrullus lanatus HOM05D003924 ORTHO05D005216 1.9e-24 115.5 72 77.8
TAR623G0957 Trochodendron aralioides HOM05D003924 ORTHO05D005216 2.5e-24 115.2 72 79.2
Cfa001582 Carpinus fangiana HOM05D003924 ORTHO05D005216 3.3e-24 114.8 72 77.8
AUR62023203 Chenopodium quinoa HOM05D003924 ORTHO05D005216 3.3e-24 114.8 70 80.0
AUR62023249 Chenopodium quinoa HOM05D003924 ORTHO05D005216 3.3e-24 114.8 70 80.0
vmacro17942 Vaccinium macrocarpon HOM05D003924 ORTHO05D005216 4.3e-24 114.4 72 77.8
MSTRG.9355 Avicennia marina HOM05D003924 ORTHO05D005216 5.6e-24 114.0 78 73.1
CsaV3_5G026020 Cucumis sativus L. HOM05D003924 ORTHO05D005216 5.6e-24 114.0 72 76.4
COL.COLO4_23765 Corchorus olitorius HOM05D003924 ORTHO05D005216 7.3e-24 113.6 72 76.4
Haze_16947 Corylus avellana HOM05D003924 ORTHO05D005216 7.3e-24 113.6 72 76.4
Duzib106G1600 Durio zibethinus HOM05D003924 ORTHO05D005216 9.5e-24 113.2 72 76.4
Duzib128G0369 Durio zibethinus HOM05D003924 ORTHO05D005216 9.5e-24 113.2 72 76.4
MELO3C025497.2 Cucumis melo HOM05D003924 ORTHO05D005216 1.2e-23 112.8 72 75.0
Gohir.A06G179002 Gossypium hirsutum HOM05D003924 ORTHO05D005216 1.2e-23 112.8 70 77.1
Gorai.010G203700 Gossypium raimondii HOM05D003924 ORTHO05D005216 1.2e-23 112.8 70 77.1
Thecc.10G066000 Theobroma cacao HOM05D003924 ORTHO05D005216 1.6e-23 112.5 72 76.4
CSS0019567 Camellia sinensis var. sinensis HOM05D003924 ORTHO05D005216 2.1e-23 112.1 72 75.0
Migut.D01216 Erythranthe guttata HOM05D003924 ORTHO05D005216 2.1e-23 112.1 72 76.4
Atru.chr2.540 Acer truncatum HOM05D003924 ORTHO05D005216 2.8e-23 111.7 71 80.3
CiPaw.01G277600 Carya illinoinensis HOM05D003924 ORTHO05D005216 2.8e-23 111.7 72 75.0
Nn2g10624 Nelumbo nucifera HOM05D003924 ORTHO05D005216 2.8e-23 111.7 72 77.8
DCAR_027685 Daucus carota HOM05D003924 ORTHO05D005216 3.6e-23 111.3 72 76.4
Ah.16g101370 Amaranthus hybridus HOM05D003924 ORTHO05D005216 6.2e-23 110.5 78 73.1
Dinv17348 Davidia involucrata HOM05D003924 ORTHO05D005216 6.2e-23 110.5 72 73.6
Ciclev10018539m.g Citrus clementina HOM05D003924 ORTHO05D005216 8.1e-23 110.2 72 79.2
Oeu033837.1 Olea europaea HOM05D003924 ORTHO05D005216 8.1e-23 110.2 72 73.6
Cc09_g02440 Coffea canephora HOM05D003924 ORTHO05D005216 1.1e-22 109.8 76 68.4
Hma1.2p1_3877F.1_g337880 Hydrangea macrophylla HOM05D003924 ORTHO05D005216 1.1e-22 109.8 105 57.1
Rhsim03G0121600 Rhododendron simsii HOM05D003924 ORTHO05D005216 1.1e-22 109.8 72 72.2
SalBow1G8295 Salvia bowleyana HOM05D003924 ORTHO05D005216 1.1e-22 109.8 78 71.8
Actinidia03018 Actinidia chinensis HOM05D003924 ORTHO05D005216 1.4e-22 109.4 71 74.6
ATR0810G286 Amborella trichopoda HOM05D003924 ORTHO05D005216 2.3e-22 108.6 72 75.0
Lj8C94T13 Lonicera japonica HOM05D003924 ORTHO05D005216 2.3e-22 108.6 72 73.6
PSO339G1038 Papaver somniferum HOM05D003924 ORTHO05D005216 6.8e-22 107.1 72 70.8
Aqoxy6G01538 Aquilegia oxysepala HOM05D003924 ORTHO05D005216 1.2e-21 106.3 72 70.8
Pp3c11_19990 Physcomitrium patens HOM05D003924 ORTHO05D005216 1.2e-21 106.3 72 68.1
SMO116G0081 Selaginella moellendorffii HOM05D003924 ORTHO05D005216 1.2e-21 106.3 72 66.7
CAN.G742.17 Capsicum annuum HOM05D003924 ORTHO05D005216 1.5e-21 105.9 79 69.6
PSO384G1475 Papaver somniferum HOM05D003924 ORTHO05D005216 1.5e-21 105.9 72 70.8
Gohir.D06G174100 Gossypium hirsutum HOM05D003924 ORTHO05D005216 2.6e-21 105.1 92 65.2
A03p21980 Brassica napus HOM05D003924 ORTHO05D005216 5.8e-21 104.0 71 73.2
BraA03t11433Z Brassica rapa HOM05D003924 ORTHO05D005216 5.8e-21 104.0 71 73.2
CDE01G0014 Ceratophyllum demersum HOM05D003924 ORTHO05D005216 5.8e-21 104.0 109 54.1
Sopen04g020010 Solanum pennellii HOM05D003924 ORTHO05D005216 7.5e-21 103.6 68 72.1
MBI19_g06147_MAGBIO Magnolia biondii HOM05D003924 ORTHO05D005216 9.9e-21 103.2 109 54.1
Mapoly0202s0011 Marchantia polymorpha HOM05D003924 ORTHO05D005216 9.9e-21 103.2 72 65.3
Peaxi162Scf01024g00323 Petunia axillaris HOM05D003924 ORTHO05D005216 1.7e-20 102.4 79 67.1
Aa31LG5G20240 Aethionema arabicum HOM05D003924 ORTHO05D005216 2.2e-20 102.1 71 70.4
BcaB01g03658 Brassica carinata HOM05D003924 ORTHO05D005216 2.2e-20 102.1 71 70.4
BolC3t14991H Brassica oleracea HOM05D003924 ORTHO05D005216 2.2e-20 102.1 71 70.4
CARHR134000 Cardamine hirsuta HOM05D003924 ORTHO05D005216 3.7e-20 101.3 71 70.4
Thhalv10016159m.g Eutrema salsugineum HOM05D003924 ORTHO05D005216 3.7e-20 101.3 71 70.4
SHI16914 Sapria himalayana HOM05D003924 ORTHO05D005216 3.7e-20 101.3 70 70.0
HPP92_017237 Vanilla planifolia HOM05D003924 ORTHO05D005216 3.7e-20 101.3 105 54.3
BcaB01g03607 Brassica carinata HOM05D003924 ORTHO05D005216 4.9e-20 100.9 71 70.4
C03p26070 Brassica napus HOM05D003924 ORTHO05D005216 8.3e-20 100.1 71 69.0
Sp4g21570 Schrenkiella parvula HOM05D003924 ORTHO05D005216 1.1e-19 99.8 69 71.0
SpUn0018_0100 Schrenkiella parvula HOM05D003924 ORTHO05D005216 1.1e-19 99.8 69 71.0
THA.LOC104809987 Tarenaya hassleriana HOM05D003924 ORTHO05D005216 1.1e-19 99.8 69 72.5
AL4G36570 Arabidopsis lyrata HOM05D003924 ORTHO05D005216 1.4e-19 99.4 71 69.0
AT2G39260 Arabidopsis thaliana HOM05D003924 ORTHO05D005216 1.4e-19 99.4 69 71.0
Lsat_1_v5_gn_2_116140 Lactuca sativa HOM05D003924 ORTHO05D005216 1.4e-19 99.4 72 68.1
Nitab4.5_0000561g0080 Nicotiana tabacum HOM05D003924 ORTHO05D005216 1.4e-19 99.4 71 67.6
HanXRQChr14g0460881 Helianthus annuus HOM05D003924 ORTHO05D005216 1.9e-19 99.0 72 68.1
BcaB06g29071 Brassica carinata HOM05D003924 ORTHO05D005216 2.4e-19 98.6 71 69.0
SEGI_09139 Sequoiadendron giganteum HOM05D003924 ORTHO05D005216 2.4e-19 98.6 70 70.0
SEGI_15949 Sequoiadendron giganteum HOM05D003924 ORTHO05D005216 2.4e-19 98.6 70 70.0
HanXRQChr07g0200911 Helianthus annuus HOM05D003924 ORTHO05D005216 4.1e-19 97.8 72 68.1
AUR62023872 Chenopodium quinoa HOM05D003924 ORTHO05D000112 5.4e-19 97.4 81 66.7
Carub.0004s2131 Capsella rubella HOM05D003924 ORTHO05D005216 9.2e-19 96.7 71 66.2
Zm00001eb185340 Zea mays HOM05D003924 ORTHO05D005216 3.5e-18 94.7 70 65.7
ECA238G4557 Erigeron canadensis HOM05D003924 ORTHO05D005216 4.6e-18 94.4 78 61.5
unitig_899.g14816 Utricularia gibba HOM05D003924 ORTHO05D005216 4.6e-18 94.4 72 63.9
Zm00001eb247890 Zea mays HOM05D003924 ORTHO05D005216 1.3e-17 92.8 70 65.7
Rhsim09G0154800 Rhododendron simsii HOM05D003924 ORTHO05D005216 1.4e-14 82.8 64 64.1
CBR_g19436 Chara braunii HOM05D003924 ORTHO05D005216 3.4e-13 78.2 77 54.5
TPR.G23196 Trifolium pratense HOM05D000141 ORTHO05D001311 7.8e-10 67.0 33 100.0
Oeu055056.1 Olea europaea HOM05D003924 ORTHO05D005216 6.6e-09 63.9 39 74.4
Cre17.g729250 Chlamydomonas reinhardtii HOM05D003924 ORTHO05D005216 2.4e-06 55.5 72 40.3
Nitab4.5_0000061g0410 Nicotiana tabacum HOM05D003924 ORTHO05D005216 2.4e-06 55.5 41 61.0
Duzib114G0370 Durio zibethinus HOM05D003924 ORTHO05D005216 9.0e-06 53.5 33 75.8


User provided reference genes

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