Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G39800 Trifolium pratense HOM05D001007 ORTHO05D050823 1.0e-73 280.0 145 100.0
Ca_14892_v3 Cicer arietinum L. HOM05D001007 ORTHO05D006705 9.9e-37 157.1 89 87.6
Medtr3g462290 Medicago truncatula HOM05D001007 ORTHO05D006705 8.4e-36 154.1 89 87.6
Lalb_Chr20g0115061 Lupinus albus HOM05D001007 ORTHO05D006705 1.1e-35 153.7 89 86.5
Psat5g162480 Pisum sativum HOM05D001007 ORTHO05D006705 2.4e-35 152.5 89 87.6
Glyma.18G067400 Glycine max HOM05D001007 ORTHO05D006705 5.4e-35 151.4 89 85.4
Phvul.006G063900 Phaseolus vulgaris HOM05D001007 ORTHO05D006705 9.3e-35 150.6 89 85.4
Lj6g0017433 Lotus japonicus HOM05D001007 ORTHO05D006705 2.7e-34 149.1 89 83.1
VMungo0540G2128 Vigna mungo HOM05D001007 ORTHO05D006705 4.6e-34 148.3 89 84.3
arahy.Tifrunner.gnm1.ann1.MGB2DA Arachis hypogaea HOM05D001007 ORTHO05D006705 1.8e-33 146.4 89 83.1
arahy.Tifrunner.gnm1.ann1.SSF8HC Arachis hypogaea HOM05D001007 ORTHO05D006705 1.8e-33 146.4 89 83.1
ClCG03G000980 Citrullus lanatus HOM05D001007 ORTHO05D006705 2.0e-29 132.9 89 75.3
HanXRQChr10g0294221 Helianthus annuus HOM05D001007 ORTHO05D006705 2.6e-29 132.5 89 75.3
GSVIVG01024809001 Vitis vinifera HOM05D001007 ORTHO05D006705 2.6e-29 132.5 89 75.3
ECA234G1277 Erigeron canadensis HOM05D001007 ORTHO05D006705 5.8e-29 131.3 89 75.3
Sed0027946 Sechium edule HOM05D001007 ORTHO05D006705 7.6e-29 131.0 89 73.0
Migut.D00864 Erythranthe guttata HOM05D001007 ORTHO05D006705 9.9e-29 130.6 90 72.2
Prupe.6G062900 Prunus persica HOM05D001007 ORTHO05D006705 9.9e-29 130.6 89 74.2
THA.LOC104814901 Tarenaya hassleriana HOM05D001007 ORTHO05D006705 1.3e-28 130.2 89 71.9
DCAR_015645 Daucus carota HOM05D001007 ORTHO05D006705 1.7e-28 129.8 89 73.0
Dinv28598 Davidia involucrata HOM05D001007 ORTHO05D006705 1.7e-28 129.8 120 60.8
FAN25G0707 Fragaria x ananassa HOM05D001007 ORTHO05D006705 1.7e-28 129.8 89 74.2
Manes.01G165300 Manihot esculenta HOM05D001007 ORTHO05D006705 1.7e-28 129.8 89 75.3
Actinidia25131 Actinidia chinensis HOM05D001007 ORTHO05D006705 2.2e-28 129.4 89 75.3
MELO3C020571.2 Cucumis melo HOM05D001007 ORTHO05D006705 2.9e-28 129.0 89 75.3
CsaV3_1G035960 Cucumis sativus L. HOM05D001007 ORTHO05D006705 4.9e-28 128.3 89 74.2
Potri.009G041200 Populus trichocarpa HOM05D001007 ORTHO05D006705 4.9e-28 128.3 88 71.6
SGA_v2.0_scaffold20G09308 Striga asiatica HOM05D001007 ORTHO05D006705 4.9e-28 128.3 90 71.1
Rhsim13G0073900 Rhododendron simsii HOM05D001007 ORTHO05D006705 6.4e-28 127.9 89 73.0
Cfa011634 Carpinus fangiana HOM05D001007 ORTHO05D006705 8.4e-28 127.5 89 73.0
FvH4_3g37880 Fragaria vesca HOM05D001007 ORTHO05D006705 1.1e-27 127.1 89 71.9
FAN11G3969 Fragaria x ananassa HOM05D001007 ORTHO05D006705 1.1e-27 127.1 89 71.9
FAN21G1509 Fragaria x ananassa HOM05D001007 ORTHO05D006705 1.4e-27 126.7 89 73.0
Solyc06g005990.4 Solanum lycopersicum HOM05D001007 ORTHO05D006705 1.4e-27 126.7 89 69.7
Sopen06g001970 Solanum pennellii HOM05D001007 ORTHO05D006705 1.4e-27 126.7 89 69.7
COL.COLO4_19087 Corchorus olitorius HOM05D001007 ORTHO05D006705 1.9e-27 126.3 89 71.9
Lj2A1128G41 Lonicera japonica HOM05D001007 ORTHO05D006705 1.9e-27 126.3 88 72.7
RcHm_v2.0_Chr5g0068091 Rosa chinensis HOM05D001007 ORTHO05D006705 2.4e-27 125.9 89 71.9
SalBow6G7021 Salvia bowleyana HOM05D001007 ORTHO05D006705 2.4e-27 125.9 90 67.8
Ciclev10027687m.g Citrus clementina HOM05D001007 ORTHO05D006705 4.2e-27 125.2 89 71.9
Sabra09G0029000 Salix brachista HOM05D001007 ORTHO05D006705 4.2e-27 125.2 88 68.2
CSS0032887 Camellia sinensis var. sinensis HOM05D001007 ORTHO05D006705 5.5e-27 124.8 123 56.9
MSTRG.18565 Avicennia marina HOM05D001007 ORTHO05D006705 7.1e-27 124.4 128 55.5
MD11G1082500 Malus domestica HOM05D001007 ORTHO05D006705 9.3e-27 124.0 89 73.0
Ah.08g220450 Amaranthus hybridus HOM05D001007 ORTHO05D006705 1.6e-26 123.2 89 70.8
Gorai.003G125100 Gossypium raimondii HOM05D001007 ORTHO05D006705 1.6e-26 123.2 89 69.7
Oeu035015.2 Olea europaea HOM05D001007 ORTHO05D006705 1.6e-26 123.2 88 69.3
CANSAT54G2449 Cannabis sativa HOM05D001007 ORTHO05D006705 2.1e-26 122.9 89 68.5
CAN.G538.2 Capsicum annuum HOM05D001007 ORTHO05D006705 2.1e-26 122.9 89 67.4
Lsat_1_v5_gn_4_65500 Lactuca sativa HOM05D001007 ORTHO05D006705 2.1e-26 122.9 89 70.8
Sc12g0000990 Simmondsia chinensis HOM05D001007 ORTHO05D006705 2.1e-26 122.9 89 69.7
Atru.chr3.4061 Acer truncatum HOM05D001007 ORTHO05D006705 2.7e-26 122.5 89 67.4
TWI79G0297 Tripterygium wilfordii HOM05D001007 ORTHO05D006705 2.7e-26 122.5 89 68.5
Gohir.D03G118700 Gossypium hirsutum HOM05D001007 ORTHO05D006705 4.6e-26 121.7 89 68.5
Duzib170G0956 Durio zibethinus HOM05D001007 ORTHO05D006705 6.0e-26 121.3 89 69.7
AL5G26180 Arabidopsis lyrata HOM05D001007 ORTHO05D006705 7.9e-26 120.9 88 70.5
CiPaw.13G082700 Carya illinoinensis HOM05D001007 ORTHO05D006705 7.9e-26 120.9 89 67.4
Gohir.A03G048400 Gossypium hirsutum HOM05D001007 ORTHO05D006705 7.9e-26 120.9 89 68.5
QL93p2004_0004 Quercus lobata HOM05D001007 ORTHO05D006705 7.9e-26 120.9 88 70.5
AT3G46960 Arabidopsis thaliana HOM05D001007 ORTHO05D006705 1.0e-25 120.6 88 70.5
Carub.0005s1318 Capsella rubella HOM05D001007 ORTHO05D006705 1.3e-25 120.2 89 68.5
AUR62001703 Chenopodium quinoa HOM05D001007 ORTHO05D006705 1.3e-25 120.2 96 63.5
Sp5g14780 Schrenkiella parvula HOM05D001007 ORTHO05D006705 1.3e-25 120.2 89 67.4
Thecc.09G307300 Theobroma cacao HOM05D001007 ORTHO05D006705 2.3e-25 119.4 89 68.5
Cpa.g.sc112.72 Carica papaya HOM05D001007 ORTHO05D006705 3.9e-25 118.6 87 73.6
Aqoxy1G00722 Aquilegia oxysepala HOM05D001007 ORTHO05D006705 5.1e-25 118.2 89 66.3
Eucgr.B02279 Eucalyptus grandis HOM05D001007 ORTHO05D006705 5.1e-25 118.2 89 68.5
Thhalv10010069m.g Eutrema salsugineum HOM05D001007 ORTHO05D006705 6.7e-25 117.9 89 68.5
QL01p027375 Quercus lobata HOM05D001007 ORTHO05D006705 6.7e-25 117.9 88 69.3
Cc01_g13740 Coffea canephora HOM05D001007 ORTHO05D006705 1.1e-24 117.1 89 66.3
Peaxi162Scf00842g00018 Petunia axillaris HOM05D001007 ORTHO05D006705 1.9e-24 116.3 89 64.0
MD03G1077900 Malus domestica HOM05D001007 ORTHO05D006705 4.3e-24 115.2 88 68.2
CARHR155590 Cardamine hirsuta HOM05D001007 ORTHO05D006705 9.6e-24 114.0 88 67.0
TAR369G0542 Trochodendron aralioides HOM05D001007 ORTHO05D006705 1.3e-23 113.6 88 67.0
Hma1.2p1_0227F.1_g096160 Hydrangea macrophylla HOM05D001007 ORTHO05D006705 1.6e-23 113.2 100 62.0
Peaxi162Scf00216g00141 Petunia axillaris HOM05D001007 ORTHO05D006705 2.1e-23 112.8 89 61.8
C03p71130 Brassica napus HOM05D001007 ORTHO05D006705 2.8e-23 112.5 89 65.2
BolC3t19398H Brassica oleracea HOM05D001007 ORTHO05D006705 2.8e-23 112.5 89 65.2
BraA06t25139Z Brassica rapa HOM05D001007 ORTHO05D006705 2.8e-23 112.5 89 65.2
ATR0618G385 Amborella trichopoda HOM05D001007 ORTHO05D006705 3.7e-23 112.1 90 65.6
A06p20600 Brassica napus HOM05D001007 ORTHO05D006705 8.2e-23 110.9 89 64.0
SHI05892 Sapria himalayana HOM05D001007 ORTHO05D050823 8.2e-23 110.9 84 65.5
Psat2g126360 Pisum sativum HOM05D004266 ORTHO05D005151 1.1e-22 110.5 67 83.6
Nn2g11355 Nelumbo nucifera HOM05D001007 ORTHO05D006705 4.0e-22 108.6 90 63.3
Zm00001eb232660 Zea mays HOM05D001007 ORTHO05D006705 4.0e-22 108.6 89 59.6
PGR102G0557 Punica granatum HOM05D001007 ORTHO05D006705 6.9e-22 107.8 89 61.8
PSO384G0462 Papaver somniferum HOM05D001007 ORTHO05D006705 3.4e-21 105.5 86 62.8
Aa31LG4G15900 Aethionema arabicum HOM05D001007 ORTHO05D006705 4.5e-21 105.1 89 62.9
PSO339G3632 Papaver somniferum HOM05D001007 ORTHO05D006705 1.7e-20 103.2 86 61.6
EL10Ac7g16109 Beta vulgaris HOM05D001007 ORTHO05D006705 3.2e-19 99.0 150 43.3
Haze_24239 Corylus avellana HOM05D001007 ORTHO05D006705 5.1e-17 91.7 159 39.0
CDE07G0187 Ceratophyllum demersum HOM05D001007 ORTHO05D006705 1.1e-16 90.5 87 55.2
Mapoly0005s0056 Marchantia polymorpha HOM05D001007 ORTHO05D006705 1.6e-15 86.7 105 48.6
vmacro02999 Vaccinium macrocarpon HOM05D001007 ORTHO05D006705 2.2e-15 86.3 134 44.0
SMO364G0835 Selaginella moellendorffii HOM05D001007 ORTHO05D006705 3.7e-15 85.5 106 46.2
Pp3c20_11040 Physcomitrium patens HOM05D001007 ORTHO05D006705 9.0e-14 80.9 93 48.4
CBR_g8252 Chara braunii HOM05D001007 ORTHO05D006705 3.4e-13 79.0 91 51.6
MBI05_g03442_MAGBIO Magnolia biondii HOM05D001007 ORTHO05D006705 7.7e-13 77.8 72 59.7
AagrBONN_evm.TU.Sc2ySwM_228.606 Anthoceros agrestis HOM05D001007 ORTHO05D006705 1.7e-12 76.6 90 46.7
AagrBONN_evm.TU.Sc2ySwM_228.608 Anthoceros agrestis HOM05D001007 ORTHO05D006705 1.7e-12 76.6 90 46.7
VMungo0251G1752 Vigna mungo HOM05D000006 ORTHO05D000001 6.7e-09 64.7 44 70.5
Nitab4.5_0000880g0030 Nicotiana tabacum HOM05D001007 ORTHO05D006705 1.5e-08 63.5 50 54.0
TPR.G647 Trifolium pratense HOM05D001007 ORTHO05D002932 9.1e-06 54.3 103 29.1


User provided reference genes

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