Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37278 Trifolium pratense HOM05D005526 ORTHO05D006802 8.8e-41 169.9 86 100.0
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 1.7e-36 155.6 79 98.7
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 1.1e-35 152.9 79 96.2
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 2.5e-35 151.8 79 96.2
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 7.2e-35 150.2 79 94.9
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 3.6e-34 147.9 79 91.1
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 1.0e-33 146.4 79 92.4
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 1.4e-33 146.0 82 87.8
Lalb_Chr14g0373671 Lupinus albus HOM05D005526 ORTHO05D006802 1.4e-33 146.0 82 86.6
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 2.3e-33 145.2 81 90.1
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 3.9e-33 144.4 83 86.7
CSS0009710 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 6.7e-33 143.7 85 83.5
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 8.8e-33 143.3 79 89.9
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 8.8e-33 143.3 82 85.4
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 1.1e-32 142.9 82 87.8
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 1.1e-32 142.9 80 87.5
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 1.5e-32 142.5 79 88.6
Lj5A68T70 Lonicera japonica HOM05D005526 ORTHO05D006802 2.0e-32 142.1 85 82.4
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 2.6e-32 141.7 83 83.1
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 3.3e-32 141.4 80 91.2
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 3.3e-32 141.4 80 91.2
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 3.3e-32 141.4 79 88.6
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 4.4e-32 141.0 79 88.6
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 4.4e-32 141.0 79 88.6
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 5.7e-32 140.6 79 87.3
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 5.7e-32 140.6 84 82.1
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 5.7e-32 140.6 79 88.6
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 7.4e-32 140.2 79 88.6
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 7.4e-32 140.2 80 86.2
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 7.4e-32 140.2 82 85.4
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 9.7e-32 139.8 83 81.9
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 1.3e-31 139.4 84 82.1
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 1.3e-31 139.4 79 87.3
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 1.7e-31 139.0 82 82.9
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 1.7e-31 139.0 82 82.9
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 1.7e-31 139.0 82 82.9
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 1.7e-31 139.0 83 83.1
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 1.7e-31 139.0 79 87.3
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 2.2e-31 138.7 79 87.3
FAN05G1558 Fragaria x ananassa HOM05D005526 ORTHO05D006802 2.2e-31 138.7 81 85.2
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 2.2e-31 138.7 85 81.2
Sabra01G0138900 Salix brachista HOM05D005526 ORTHO05D006802 2.2e-31 138.7 82 82.9
Cc04_g04010 Coffea canephora HOM05D005526 ORTHO05D006802 2.8e-31 138.3 83 84.3
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 2.8e-31 138.3 79 87.3
ATR1156G076 Amborella trichopoda HOM05D005526 ORTHO05D006802 3.7e-31 137.9 84 83.3
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 3.7e-31 137.9 79 86.1
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 3.7e-31 137.9 79 86.1
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 3.7e-31 137.9 79 86.1
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 3.7e-31 137.9 79 86.1
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 3.7e-31 137.9 82 84.1
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 3.7e-31 137.9 79 86.1
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 4.8e-31 137.5 79 84.8
GSVIVG01017250001 Vitis vinifera HOM05D005526 ORTHO05D006802 4.8e-31 137.5 75 89.3
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 6.3e-31 137.1 79 86.1
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 6.3e-31 137.1 79 84.8
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 6.3e-31 137.1 79 86.1
Sopen06g025280 Solanum pennellii HOM05D005526 ORTHO05D006802 6.3e-31 137.1 85 80.0
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 6.3e-31 137.1 79 84.8
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 6.3e-31 137.1 79 84.8
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 8.2e-31 136.7 79 86.1
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 8.2e-31 136.7 85 82.4
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 8.2e-31 136.7 79 86.1
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 1.1e-30 136.3 80 85.0
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 1.1e-30 136.3 79 84.8
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 1.1e-30 136.3 79 86.1
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 1.1e-30 136.3 82 82.9
RcHm_v2.0_Chr2g0136631 Rosa chinensis HOM05D005526 ORTHO05D006802 1.1e-30 136.3 81 84.0
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 1.4e-30 136.0 79 84.8
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 1.8e-30 135.6 79 84.8
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 1.8e-30 135.6 79 84.8
HanXRQChr10g0303081 Helianthus annuus HOM05D005526 ORTHO05D006802 2.4e-30 135.2 82 84.1
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 3.1e-30 134.8 79 83.5
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 3.1e-30 134.8 79 83.5
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 3.1e-30 134.8 82 82.9
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 3.1e-30 134.8 79 83.5
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 4.1e-30 134.4 79 84.8
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 4.1e-30 134.4 80 85.0
PGSC0003DMG401028513 Solanum tuberosum HOM05D005526 ORTHO05D006802 4.1e-30 134.4 82 81.7
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 4.1e-30 134.4 82 81.7
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 7.0e-30 133.7 81 82.7
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 7.0e-30 133.7 79 82.3
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 9.1e-30 133.3 75 88.0
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 1.2e-29 132.9 79 83.5
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 1.6e-29 132.5 75 85.3
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 1.6e-29 132.5 81 81.5
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 2.0e-29 132.1 79 83.5
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 3.5e-29 131.3 79 84.8
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 4.5e-29 131.0 75 86.7
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 1.0e-28 129.8 80 82.5
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 1.7e-28 129.0 79 82.3
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 2.2e-28 128.6 80 81.2
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 2.2e-28 128.6 79 77.2
AagrBONN_evm.TU.Sc2ySwM_368.2432 Anthoceros agrestis HOM05D005526 ORTHO05D006802 6.5e-28 127.1 81 75.3
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 6.5e-28 127.1 87 78.2
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 6.5e-28 127.1 75 84.0
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 2.1e-26 122.1 79 75.9
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 3.6e-26 121.3 79 72.2
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 8.0e-26 120.2 101 65.3
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 1.0e-25 119.8 79 72.2
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 8.8e-25 116.7 125 54.4
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 3.3e-24 114.8 79 68.4
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 7.5e-24 113.6 79 73.4
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 8.3e-23 110.2 63 84.1
Zm00001eb342510 Zea mays HOM05D005526 ORTHO05D006802 1.1e-22 109.8 79 70.9
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 1.2e-18 96.3 56 80.4
CAN.G395.47 Capsicum annuum HOM05D005526 ORTHO05D006802 3.5e-13 78.2 50 76.0
Gohir.A10G140700 Gossypium hirsutum HOM05D000009 ORTHO05D000008 2.3e-12 75.5 42 85.7
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 5.5e-11 70.9 54 72.2
Cre11.g475400 Chlamydomonas reinhardtii HOM05D005526 ORTHO05D006802 1.2e-10 69.7 70 54.3
COL.COLO4_12895 Corchorus olitorius HOM05D005526 ORTHO05D006802 1.8e-06 55.8 30 83.3


User provided reference genes

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