Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33172 Trifolium pratense HOM05D006373 ORTHO05D008145 3.8e-160 568.2 295 100.0
TPR.G37746 Trifolium pratense HOM05D006373 ORTHO05D008145 1.6e-150 536.2 295 94.6
Medtr7g076290 Medicago truncatula HOM05D006373 ORTHO05D008145 9.7e-132 473.8 295 80.7
Psat3g112440 Pisum sativum HOM05D006373 ORTHO05D008145 1.5e-124 449.9 295 77.6
Ca_07867_v3 Cicer arietinum L. HOM05D006373 ORTHO05D008145 1.3e-115 420.2 298 72.8
Lj1g0016698 Lotus japonicus HOM05D006373 ORTHO05D008145 3.5e-105 385.6 295 67.1
arahy.Tifrunner.gnm1.ann1.V9KE7M Arachis hypogaea HOM05D006373 ORTHO05D008145 7.8e-97 357.8 295 63.1
Glyma.09G264000 Glycine max HOM05D006373 ORTHO05D008145 1.5e-95 353.6 296 63.2
Phvul.008G070200 Phaseolus vulgaris HOM05D006373 ORTHO05D008145 1.8e-93 346.7 296 62.2
Glyma.18G228000 Glycine max HOM05D006373 ORTHO05D008145 2.3e-93 346.3 297 61.6
arahy.Tifrunner.gnm1.ann1.TZ2CHG Arachis hypogaea HOM05D006373 ORTHO05D008145 7.5e-92 341.3 336 55.7
VMungo1383G2252 Vigna mungo HOM05D006373 ORTHO05D008145 3.0e-88 329.3 297 61.6
Lalb_Chr01g0021121 Lupinus albus HOM05D006373 ORTHO05D008145 8.9e-85 317.8 295 56.3
RcHm_v2.0_Chr1g0352131 Rosa chinensis HOM05D006373 ORTHO05D008145 4.6e-73 278.9 298 51.3
Haze_15231 Corylus avellana HOM05D006373 ORTHO05D008145 2.3e-72 276.6 298 52.0
Cfa004178 Carpinus fangiana HOM05D006373 ORTHO05D008145 2.5e-71 273.1 290 52.1
FAN06G0518 Fragaria x ananassa HOM05D006373 ORTHO05D008145 7.3e-71 271.6 298 50.0
FvH4_7g12990 Fragaria vesca HOM05D006373 ORTHO05D008145 9.6e-71 271.2 298 50.0
GSVIVG01027599001 Vitis vinifera HOM05D006373 ORTHO05D008145 2.8e-70 269.6 296 50.3
FAN01G2011 Fragaria x ananassa HOM05D006373 ORTHO05D008145 6.2e-70 268.5 298 49.7
QL08p050698 Quercus lobata HOM05D006373 ORTHO05D008145 8.1e-70 268.1 297 50.5
FAN10G3773 Fragaria x ananassa HOM05D006373 ORTHO05D008145 3.1e-69 266.2 300 50.7
FAN10G2811 Fragaria x ananassa HOM05D006373 ORTHO05D008145 9.0e-69 264.6 298 50.0
Prupe.2G154000 Prunus persica HOM05D006373 ORTHO05D008145 5.8e-68 261.9 303 49.8
MD07G1125800 Malus domestica HOM05D006373 ORTHO05D008145 1.1e-66 257.7 287 49.1
Dinv32419 Davidia involucrata HOM05D006373 ORTHO05D008145 4.2e-66 255.8 296 48.0
CiPaw.02G024800 Carya illinoinensis HOM05D006373 ORTHO05D008145 2.1e-65 253.4 297 49.5
Atru.chr5.401 Acer truncatum HOM05D006373 ORTHO05D008145 3.5e-65 252.7 293 48.1
FAN06G4951 Fragaria x ananassa HOM05D006373 ORTHO05D008145 4.6e-65 252.3 289 48.4
FAN03G2318 Fragaria x ananassa HOM05D006373 ORTHO05D008145 6.0e-65 251.9 289 47.8
CSS0009190 Camellia sinensis var. sinensis HOM05D006373 ORTHO05D008145 7.9e-65 251.5 298 45.3
TWI59G0120 Tripterygium wilfordii HOM05D006373 ORTHO05D008145 2.3e-64 250.0 295 48.5
Ciclev10019320m.g Citrus clementina HOM05D006373 ORTHO05D008145 8.7e-64 248.1 308 47.4
Actinidia33446 Actinidia chinensis HOM05D006373 ORTHO05D008145 9.6e-63 244.6 297 45.1
Cpa.g.sc57.89 Carica papaya HOM05D006373 ORTHO05D008145 9.6e-63 244.6 296 46.6
CANSAT56G4468 Cannabis sativa HOM05D006373 ORTHO05D008145 1.6e-62 243.8 294 45.6
Eucgr.E00282 Eucalyptus grandis HOM05D006373 ORTHO05D008145 2.1e-62 243.4 297 45.1
CsaV3_6G005860 Cucumis sativus L. HOM05D006373 ORTHO05D008145 6.9e-61 238.4 304 47.4
Manes.01G262700 Manihot esculenta HOM05D006373 ORTHO05D008145 2.2e-59 233.4 293 44.0
PGR042G0347 Punica granatum HOM05D006373 ORTHO05D008145 4.9e-59 232.3 296 44.3
Sed0002578 Sechium edule HOM05D006373 ORTHO05D008145 6.4e-59 231.9 311 45.0
vmacro20974 Vaccinium macrocarpon HOM05D006373 ORTHO05D008145 1.6e-57 227.3 294 43.9
Rhsim01G0155400 Rhododendron simsii HOM05D006373 ORTHO05D008145 2.7e-57 226.5 294 42.2
Duzib133G1433 Durio zibethinus HOM05D006373 ORTHO05D008145 7.9e-57 224.9 293 44.7
Nn6g34269 Nelumbo nucifera HOM05D006373 ORTHO05D008145 7.9e-57 224.9 300 45.7
MBI12_g11810_MAGBIO Magnolia biondii HOM05D006373 ORTHO05D008145 2.3e-56 223.4 298 44.0
PSO478G1066 Papaver somniferum HOM05D006373 ORTHO05D008145 2.3e-56 223.4 301 44.5
DCAR_025171 Daucus carota HOM05D006373 ORTHO05D008145 3.0e-56 223.0 297 41.8
PSO782G5614 Papaver somniferum HOM05D006373 ORTHO05D008145 6.7e-56 221.9 301 44.2
Gohir.D08G150600 Gossypium hirsutum HOM05D006373 ORTHO05D008145 1.5e-55 220.7 297 45.5
Oeu059230.1 Olea europaea HOM05D006373 ORTHO05D008145 1.5e-55 220.7 303 42.6
Gorai.004G156300 Gossypium raimondii HOM05D006373 ORTHO05D008145 3.3e-55 219.5 297 45.1
SalBow3G0067 Salvia bowleyana HOM05D006373 ORTHO05D008145 5.6e-55 218.8 294 42.2
COL.COLO4_06964 Corchorus olitorius HOM05D006373 ORTHO05D008145 9.6e-55 218.0 293 43.7
Hma1.2p1_0068F.1_g037130 Hydrangea macrophylla HOM05D006373 ORTHO05D008145 1.3e-54 217.6 296 42.6
MSTRG.20789 Avicennia marina HOM05D006373 ORTHO05D008145 2.8e-54 216.5 296 42.9
Gohir.A08G129300 Gossypium hirsutum HOM05D006373 ORTHO05D008145 2.8e-54 216.5 297 45.1
Cc02_g37210 Coffea canephora HOM05D006373 ORTHO05D008145 3.7e-54 216.1 302 43.4
ClCG06G000110 Citrullus lanatus HOM05D006373 ORTHO05D008145 4.8e-54 215.7 290 45.5
Thecc.01G369000 Theobroma cacao HOM05D006373 ORTHO05D008145 1.1e-53 214.5 293 44.0
Sabra14G0055000 Salix brachista HOM05D006373 ORTHO05D008145 3.1e-53 213.0 362 37.3
Sc23g0003310 Simmondsia chinensis HOM05D006373 ORTHO05D008145 2.0e-52 210.3 299 43.1
Hund27327 Selenicereus undatus HOM05D006373 ORTHO05D008145 1.4e-50 204.1 297 41.8
CAN.G170.53 Capsicum annuum HOM05D006373 ORTHO05D008145 9.3e-50 201.4 299 40.8
HanXRQChr03g0093561 Helianthus annuus HOM05D006373 ORTHO05D008145 1.2e-49 201.1 294 41.2
Lj7A521G13 Lonicera japonica HOM05D006373 ORTHO05D008145 2.1e-49 200.3 300 44.0
Solyc01g091820.3 Solanum lycopersicum HOM05D006373 ORTHO05D008145 4.6e-49 199.1 301 40.2
Zm00001eb318880 Zea mays HOM05D006373 ORTHO05D008145 1.0e-48 198.0 315 39.0
Nitab4.5_0010430g0020 Nicotiana tabacum HOM05D006373 ORTHO05D008145 5.1e-48 195.7 295 37.3
PGSC0003DMG400017049 Solanum tuberosum HOM05D006373 ORTHO05D008145 8.7e-48 194.9 301 39.2
Sopen01g037590 Solanum pennellii HOM05D006373 ORTHO05D008145 1.5e-47 194.1 299 39.8
TAR375G0714 Trochodendron aralioides HOM05D006373 ORTHO05D008145 7.4e-47 191.8 185 52.4
Nitab4.5_0004550g0010 Nicotiana tabacum HOM05D006373 ORTHO05D008145 2.8e-46 189.9 295 36.6
THA.LOC104801460 Tarenaya hassleriana HOM05D006373 ORTHO05D008145 2.8e-46 189.9 296 39.5
Os09g0521900 Oryza sativa ssp. japonica HOM05D006373 ORTHO05D008145 4.8e-46 189.1 313 38.3
Peaxi162Scf00021g00529 Petunia axillaris HOM05D006373 ORTHO05D008145 4.1e-45 186.0 294 38.8
Aqoxy7G00462 Aquilegia oxysepala HOM05D006373 ORTHO05D008145 1.2e-44 184.5 355 35.8
SGA_v2.0_scaffold153G37065 Striga asiatica HOM05D006373 ORTHO05D008145 5.9e-44 182.2 294 40.1
ATR0757G016 Amborella trichopoda HOM05D006373 ORTHO05D008145 1.7e-43 180.6 261 41.4
ECA240G2884 Erigeron canadensis HOM05D006373 ORTHO05D008145 1.4e-42 177.6 294 37.4
Carub.0001s0035 Capsella rubella HOM05D006373 ORTHO05D008145 4.6e-41 172.6 294 37.4
Thhalv10007143m.g Eutrema salsugineum HOM05D006373 ORTHO05D008145 6.1e-41 172.2 294 36.7
Lsat_1_v5_gn_3_135660 Lactuca sativa HOM05D006373 ORTHO05D008145 1.4e-40 171.0 262 38.5
HPP92_004956 Vanilla planifolia HOM05D006373 ORTHO05D008145 3.9e-40 169.5 301 38.9
Migut.B01684 Erythranthe guttata HOM05D006373 ORTHO05D008145 2.5e-39 166.8 212 42.5
Sp1g00420 Schrenkiella parvula HOM05D006373 ORTHO05D008145 3.3e-39 166.4 296 35.5
EL10Ac1g00966 Beta vulgaris HOM05D006373 ORTHO05D008145 1.3e-38 164.5 210 43.3
CARHR000470 Cardamine hirsuta HOM05D006373 ORTHO05D008145 1.7e-38 164.1 291 36.8
AT1G01880 Arabidopsis thaliana HOM05D006373 ORTHO05D008145 3.7e-38 162.9 293 37.5
Aa31LG1G11190 Aethionema arabicum HOM05D006373 ORTHO05D008145 2.4e-37 160.2 251 36.7
AUR62033368 Chenopodium quinoa HOM05D006373 ORTHO05D008145 5.3e-37 159.1 256 39.1
SHI25520 Sapria himalayana HOM05D006373 ORTHO05D008145 1.5e-36 157.5 220 39.5
BraA09t42266Z Brassica rapa HOM05D006373 ORTHO05D008145 4.5e-36 156.0 297 37.0
BolC8t52903H Brassica oleracea HOM05D006373 ORTHO05D008145 1.1e-34 151.4 295 37.3
MELO3C022527.2 Cucumis melo HOM05D006373 ORTHO05D008145 4.2e-34 149.4 227 50.7
C08p53900 Brassica napus HOM05D006373 ORTHO05D008145 9.4e-34 148.3 295 36.6
SEGI_02913 Sequoiadendron giganteum HOM05D006373 ORTHO05D008145 8.8e-24 115.2 278 32.0
Pp3c12_11380 Physcomitrium patens HOM05D006373 ORTHO05D008145 7.7e-20 102.1 287 28.6
Mapoly0022s0105 Marchantia polymorpha HOM05D006373 ORTHO05D008145 4.8e-14 82.8 269 27.1
SMO351G0379 Selaginella moellendorffii HOM05D006373 ORTHO05D008145 3.1e-13 80.1 131 33.6
TAR375G0186 Trochodendron aralioides HOM05D006373 ORTHO05D008145 6.8e-08 62.4 109 39.4


User provided reference genes

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