Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G31491 Trifolium pratense HOM05D004425 ORTHO05D005783 3.7e-79 298.1 150 100.0
Ca_04667_v3 Cicer arietinum L. HOM05D004425 ORTHO05D005783 4.4e-48 194.9 167 67.7
Cfa018276 Carpinus fangiana HOM05D004425 ORTHO05D005783 5.6e-35 151.4 158 60.1
Haze_17811 Corylus avellana HOM05D004425 ORTHO05D005783 4.8e-34 148.3 164 57.3
QL02p037179 Quercus lobata HOM05D004425 ORTHO05D005783 1.4e-33 146.7 160 57.5
CiPaw.15G011900 Carya illinoinensis HOM05D004425 ORTHO05D005783 2.4e-33 146.0 170 55.3
Phvul.004G089600 Phaseolus vulgaris HOM05D004425 ORTHO05D005783 6.9e-33 144.4 160 53.1
Thecc.08G161900 Theobroma cacao HOM05D004425 ORTHO05D005783 2.6e-32 142.5 158 51.9
Glyma.16G161600 Glycine max HOM05D004425 ORTHO05D005783 4.5e-32 141.7 158 55.1
Lalb_Chr01g0009831 Lupinus albus HOM05D004425 ORTHO05D005783 4.5e-32 141.7 149 59.7
Lalb_Chr19g0130031 Lupinus albus HOM05D004425 ORTHO05D005783 9.9e-32 140.6 161 57.8
VMungo0464G1137 Vigna mungo HOM05D004425 ORTHO05D005783 9.9e-32 140.6 160 52.5
Duzib093G0931 Durio zibethinus HOM05D004425 ORTHO05D005783 2.2e-31 139.4 157 52.2
FAN20G2288 Fragaria x ananassa HOM05D004425 ORTHO05D005783 2.9e-31 139.0 153 52.3
FvH4_2g12900 Fragaria vesca HOM05D004425 ORTHO05D005783 3.8e-31 138.7 157 54.1
FAN24G2283 Fragaria x ananassa HOM05D004425 ORTHO05D005783 3.8e-31 138.7 157 54.1
Potri.005G197900 Populus trichocarpa HOM05D004425 ORTHO05D005783 8.4e-31 137.5 158 52.5
RcHm_v2.0_Chr6g0274001 Rosa chinensis HOM05D004425 ORTHO05D005783 8.4e-31 137.5 152 56.6
FAN15G1954 Fragaria x ananassa HOM05D004425 ORTHO05D005783 1.1e-30 137.1 153 51.6
COL.COLO4_13726 Corchorus olitorius HOM05D004425 ORTHO05D005783 1.4e-30 136.7 166 52.4
Ciclev10000894m.g Citrus clementina HOM05D004425 ORTHO05D005783 2.4e-30 136.0 164 51.2
PGR102G1394 Punica granatum HOM05D004425 ORTHO05D005783 2.4e-30 136.0 160 51.2
TPR.G17013 Trifolium pratense HOM05D004425 ORTHO05D005783 2.4e-30 136.0 161 55.3
Manes.02G184000 Manihot esculenta HOM05D004425 ORTHO05D005783 4.2e-30 135.2 157 50.3
FAN27G1841 Fragaria x ananassa HOM05D004425 ORTHO05D005783 5.5e-30 134.8 153 51.6
Glyma.10G220900 Glycine max HOM05D004425 ORTHO05D005783 7.1e-30 134.4 160 56.2
Gohir.A02G062300 Gossypium hirsutum HOM05D004425 ORTHO05D005783 7.1e-30 134.4 163 50.9
arahy.Tifrunner.gnm1.ann1.9T1T9I Arachis hypogaea HOM05D004425 ORTHO05D005783 9.3e-30 134.0 163 50.9
Lj2g0007374 Lotus japonicus HOM05D004425 ORTHO05D005783 9.3e-30 134.0 159 56.0
Sabra05G0150700 Salix brachista HOM05D004425 ORTHO05D005783 1.2e-29 133.7 161 50.9
Potri.002G063400 Populus trichocarpa HOM05D004425 ORTHO05D005783 1.6e-29 133.3 158 52.5
Gohir.D02G068000 Gossypium hirsutum HOM05D004425 ORTHO05D005783 2.1e-29 132.9 160 51.2
Gorai.005G076800 Gossypium raimondii HOM05D004425 ORTHO05D005783 2.1e-29 132.9 160 50.0
Lalb_Chr06g0161781 Lupinus albus HOM05D004425 ORTHO05D005783 3.5e-29 132.1 156 53.8
Lj5g0021674 Lotus japonicus HOM05D004425 ORTHO05D005783 6.0e-29 131.3 164 53.0
Prupe.8G042900 Prunus persica HOM05D004425 ORTHO05D005783 7.9e-29 131.0 166 48.8
Atru.chr13.1991 Acer truncatum HOM05D004425 ORTHO05D005783 1.0e-28 130.6 165 51.5
MD05G1034600 Malus domestica HOM05D004425 ORTHO05D005783 1.3e-28 130.2 175 47.4
arahy.Tifrunner.gnm1.ann1.64NVCN Arachis hypogaea HOM05D004425 ORTHO05D005783 2.3e-28 129.4 167 48.5
arahy.Tifrunner.gnm1.ann1.J67SBC Arachis hypogaea HOM05D004425 ORTHO05D005783 2.3e-28 129.4 167 48.5
arahy.Tifrunner.gnm1.ann1.GMAE2R Arachis hypogaea HOM05D004425 ORTHO05D005783 3.0e-28 129.0 162 49.4
Hma1.2p1_0678F.1_g202100 Hydrangea macrophylla HOM05D004425 ORTHO05D005783 3.9e-28 128.6 156 55.1
Glyma.20G170600 Glycine max HOM05D004425 ORTHO05D005783 6.7e-28 127.9 159 56.0
ClCG08G007280 Citrullus lanatus HOM05D004425 ORTHO05D005783 1.1e-27 127.1 157 51.0
MELO3C019971.2 Cucumis melo HOM05D004425 ORTHO05D005783 3.3e-27 125.6 157 51.0
CsaV3_6G004950 Cucumis sativus L. HOM05D004425 ORTHO05D005783 4.3e-27 125.2 157 50.3
Medtr1g097610 Medicago truncatula HOM05D004425 ORTHO05D005783 4.3e-27 125.2 157 53.5
Hund17360 Selenicereus undatus HOM05D004425 ORTHO05D005783 5.6e-27 124.8 163 46.6
Solyc04g072036.1 Solanum lycopersicum HOM05D004425 ORTHO05D005783 7.4e-27 124.4 151 52.3
TWI60G0965 Tripterygium wilfordii HOM05D004425 ORTHO05D005783 7.4e-27 124.4 130 58.5
Sopen04g028080 Solanum pennellii HOM05D004425 ORTHO05D005783 1.3e-26 123.6 151 52.3
PGSC0003DMG400025077 Solanum tuberosum HOM05D004425 ORTHO05D005783 1.3e-26 123.6 152 51.3
Sed0020223 Sechium edule HOM05D004425 ORTHO05D005783 3.7e-26 122.1 149 51.7
TWI60G0364 Tripterygium wilfordii HOM05D004425 ORTHO05D005783 3.7e-26 122.1 130 56.9
TAR628G0201 Trochodendron aralioides HOM05D004425 ORTHO05D005783 3.7e-26 122.1 159 49.7
Peaxi162Scf00360g00089 Petunia axillaris HOM05D004425 ORTHO05D005783 4.8e-26 121.7 154 48.7
Nitab4.5_0003443g0070 Nicotiana tabacum HOM05D004425 ORTHO05D005783 1.1e-25 120.6 155 46.5
VMungo0720G3015 Vigna mungo HOM05D004425 ORTHO05D005783 1.1e-25 120.6 164 49.4
Psat6g190160 Pisum sativum HOM05D004425 ORTHO05D005783 1.4e-25 120.2 166 50.6
CSS0010963 Camellia sinensis var. sinensis HOM05D004425 ORTHO05D005783 1.8e-25 119.8 160 50.6
Rhsim11G0088600 Rhododendron simsii HOM05D004425 ORTHO05D005783 2.4e-25 119.4 156 48.1
Aqoxy5G02018 Aquilegia oxysepala HOM05D004425 ORTHO05D005783 3.1e-25 119.0 152 48.0
Nitab4.5_0003178g0010 Nicotiana tabacum HOM05D004425 ORTHO05D005783 3.1e-25 119.0 155 50.3
CSS0011525 Camellia sinensis var. sinensis HOM05D004425 ORTHO05D005783 6.9e-25 117.9 160 48.8
Nn6g32191 Nelumbo nucifera HOM05D004425 ORTHO05D005783 9.0e-25 117.5 160 48.1
Thhalv10018428m.g Eutrema salsugineum HOM05D004425 ORTHO05D005783 2.0e-24 116.3 144 47.9
Sed0006049 Sechium edule HOM05D004425 ORTHO05D005783 2.6e-24 115.9 157 49.0
EL10Ac1g01372 Beta vulgaris HOM05D004425 ORTHO05D005783 3.4e-24 115.5 154 49.4
AUR62007694 Chenopodium quinoa HOM05D004425 ORTHO05D005783 3.4e-24 115.5 154 46.8
Migut.C00150 Erythranthe guttata HOM05D004425 ORTHO05D005783 3.4e-24 115.5 159 47.2
Lsat_1_v5_gn_9_42380 Lactuca sativa HOM05D004425 ORTHO05D005783 5.8e-24 114.8 151 49.0
AUR62007692 Chenopodium quinoa HOM05D004425 ORTHO05D005783 7.6e-24 114.4 154 46.8
Oeu061448.2 Olea europaea HOM05D004425 ORTHO05D005783 1.3e-23 113.6 153 51.0
Cc10_g06490 Coffea canephora HOM05D004425 ORTHO05D005783 1.7e-23 113.2 155 50.3
MSTRG.972 Avicennia marina HOM05D004425 ORTHO05D005783 2.9e-23 112.5 155 49.0
CAN.G1183.17 Capsicum annuum HOM05D004425 ORTHO05D005783 2.9e-23 112.5 153 47.1
DCAR_014325 Daucus carota HOM05D004425 ORTHO05D005783 2.9e-23 112.5 160 50.0
Eucgr.F02682 Eucalyptus grandis HOM05D004425 ORTHO05D005783 3.8e-23 112.1 151 49.0
AUR62013449 Chenopodium quinoa HOM05D004425 ORTHO05D005783 6.5e-23 111.3 155 43.2
PSO210G1911 Papaver somniferum HOM05D004425 ORTHO05D005783 6.5e-23 111.3 150 46.0
GSVIVG01013706001 Vitis vinifera HOM05D004425 ORTHO05D005783 6.5e-23 111.3 122 54.9
Cpa.g.sc26.112 Carica papaya HOM05D004425 ORTHO05D005783 1.1e-22 110.5 152 44.7
Oeu046065.1 Olea europaea HOM05D004425 ORTHO05D005783 1.4e-22 110.2 153 49.0
Carub.0002s1848 Capsella rubella HOM05D004425 ORTHO05D005783 1.9e-22 109.8 142 45.8
DCAR_001192 Daucus carota HOM05D004425 ORTHO05D005783 7.1e-22 107.8 149 49.7
PSO170G0918 Papaver somniferum HOM05D004425 ORTHO05D005783 7.1e-22 107.8 150 45.3
vmacro01503 Vaccinium macrocarpon HOM05D004425 ORTHO05D005783 7.1e-22 107.8 124 52.4
MBI01_g29006_MAGBIO Magnolia biondii HOM05D004425 ORTHO05D005783 2.7e-21 105.9 160 48.8
THA.LOC104810492 Tarenaya hassleriana HOM05D004425 ORTHO05D005783 4.6e-21 105.1 147 44.9
unitig_37.g13122 Utricularia gibba HOM05D004425 ORTHO05D005783 4.6e-21 105.1 161 46.0
Ah.05g169010 Amaranthus hybridus HOM05D004425 ORTHO05D005783 1.0e-20 104.0 156 42.9
AT1G71720 Arabidopsis thaliana HOM05D004425 ORTHO05D005783 1.0e-20 104.0 141 44.7
AL2G31290 Arabidopsis lyrata HOM05D004425 ORTHO05D005783 1.8e-20 103.2 142 43.7
Sc26g0002880 Simmondsia chinensis HOM05D004425 ORTHO05D005783 2.3e-20 102.8 156 42.3
SalBow7G3651 Salvia bowleyana HOM05D004425 ORTHO05D005783 3.0e-20 102.4 152 44.7
CDE02G3532 Ceratophyllum demersum HOM05D004425 ORTHO05D005783 5.1e-20 101.7 140 45.7
HanXRQChr11g0320171 Helianthus annuus HOM05D004425 ORTHO05D005783 6.7e-20 101.3 159 42.1
SGA_v2.0_scaffold133G34677 Striga asiatica HOM05D004425 ORTHO05D005783 1.5e-19 100.1 152 44.7
Migut.C00138 Erythranthe guttata HOM05D004425 ORTHO05D005783 3.3e-19 99.0 127 50.4
BcaC08g46598 Brassica carinata HOM05D004425 ORTHO05D005783 5.7e-19 98.2 141 41.1
Sp5g26750 Schrenkiella parvula HOM05D004425 ORTHO05D005783 3.1e-17 92.4 94 53.2
Aa31LG4G8910 Aethionema arabicum HOM05D004425 ORTHO05D005783 6.9e-17 91.3 94 51.1
HPP92_022935 Vanilla planifolia HOM05D004425 ORTHO05D005783 2.6e-16 89.4 129 46.5
HPP92_022945 Vanilla planifolia HOM05D004425 ORTHO05D005783 2.6e-16 89.4 129 46.5
ECA232G4004 Erigeron canadensis HOM05D004425 ORTHO05D005783 2.9e-15 85.9 148 39.2
ATR0006G031 Amborella trichopoda HOM05D004425 ORTHO05D005783 1.4e-14 83.6 137 43.1
C06p45770 Brassica napus HOM05D004425 ORTHO05D005783 7.2e-14 81.3 92 47.8
BolC6t39629H Brassica oleracea HOM05D004425 ORTHO05D005783 1.6e-13 80.1 92 47.8
Lj7A385T59 Lonicera japonica HOM05D004425 ORTHO05D005783 1.0e-12 77.4 140 43.6
A07p37870 Brassica napus HOM05D004425 ORTHO05D005783 1.8e-12 76.6 46 71.7
BraA07t31352Z Brassica rapa HOM05D004425 ORTHO05D005783 1.8e-12 76.6 46 71.7
Phvul.007G084200 Phaseolus vulgaris HOM05D004425 ORTHO05D005783 1.7e-10 70.1 162 36.4
Ca_10656_v3 Cicer arietinum L. HOM05D004425 ORTHO05D005783 5.3e-09 65.1 148 35.8
Actinidia17768 Actinidia chinensis HOM05D004425 ORTHO05D005783 5.9e-08 61.6 155 31.6
Zm00001eb160710 Zea mays HOM05D004425 ORTHO05D005783 5.9e-08 61.6 53 52.8
MD10G1037300 Malus domestica HOM05D004425 ORTHO05D005783 2.9e-07 59.3 84 48.8
SEGI_21205 Sequoiadendron giganteum HOM05D004425 ORTHO05D005783 8.5e-07 57.8 46 54.3
Os01g0589000 Oryza sativa ssp. japonica HOM05D004425 ORTHO05D005783 3.2e-06 55.8 55 52.7


User provided reference genes

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