Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G29743 Trifolium pratense HOM05D004763 ORTHO05D007492 1.6e-118 429.5 223 100.0
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 4.6e-65 251.9 220 66.4
Medtr2g098510 Medicago truncatula HOM05D004763 ORTHO05D007492 5.0e-64 248.4 221 64.7
Psat5g288480 Pisum sativum HOM05D004763 ORTHO05D007492 8.6e-64 247.7 221 66.5
Glyma.13G342900 Glycine max HOM05D004763 ORTHO05D007492 4.3e-63 245.4 221 65.2
Phvul.005G150500 Phaseolus vulgaris HOM05D004763 ORTHO05D007492 1.6e-62 243.4 218 65.1
VMungo1080G1755 Vigna mungo HOM05D004763 ORTHO05D007492 8.0e-62 241.1 221 63.8
Lalb_Chr14g0372291 Lupinus albus HOM05D004763 ORTHO05D007492 5.2e-61 238.4 222 64.9
arahy.Tifrunner.gnm1.ann1.X75IXN Arachis hypogaea HOM05D004763 ORTHO05D007492 9.8e-60 234.2 220 64.1
arahy.Tifrunner.gnm1.ann1.P0K6XU Arachis hypogaea HOM05D004763 ORTHO05D007492 1.3e-59 233.8 220 64.1
Lj3g0020649 Lotus japonicus HOM05D004763 ORTHO05D007492 1.7e-59 233.4 220 62.3
Lj4g0010878 Lotus japonicus HOM05D004763 ORTHO05D007492 1.7e-59 233.4 220 62.3
arahy.Tifrunner.gnm1.ann1.VYK1P0 Arachis hypogaea HOM05D004763 ORTHO05D007492 2.9e-59 232.6 220 64.1
arahy.Tifrunner.gnm1.ann1.GN3GFY Arachis hypogaea HOM05D004763 ORTHO05D007492 8.3e-59 231.1 220 63.6
Haze_23044 Corylus avellana HOM05D004763 ORTHO05D007492 6.0e-57 224.9 218 60.6
Cc01_g04070 Coffea canephora HOM05D004763 ORTHO05D007492 8.6e-56 221.1 221 57.5
Gohir.D13G219100 Gossypium hirsutum HOM05D004763 ORTHO05D007492 1.1e-55 220.7 216 58.8
Gorai.013G250000 Gossypium raimondii HOM05D004763 ORTHO05D007492 1.1e-55 220.7 216 58.8
Carub.0003s2074 Capsella rubella HOM05D004763 ORTHO05D007492 1.5e-55 220.3 219 57.5
Hma1.2p1_1169F.1_g263300 Hydrangea macrophylla HOM05D004763 ORTHO05D007492 1.5e-55 220.3 219 58.9
Hma1.2p1_1169F.1_g263310 Hydrangea macrophylla HOM05D004763 ORTHO05D007492 1.5e-55 220.3 219 58.9
AL3G34700 Arabidopsis lyrata HOM05D004763 ORTHO05D007492 2.5e-55 219.5 219 58.0
DCAR_024396 Daucus carota HOM05D004763 ORTHO05D007492 2.5e-55 219.5 221 58.4
COL.COLO4_09893 Corchorus olitorius HOM05D004763 ORTHO05D007492 3.3e-55 219.2 215 58.6
Lju1319A4T15 Lonicera japonica HOM05D004763 ORTHO05D007492 3.3e-55 219.2 216 59.3
AT3G20780 Arabidopsis thaliana HOM05D004763 ORTHO05D007492 5.6e-55 218.4 219 57.5
THA.LOC104816912 Tarenaya hassleriana HOM05D004763 ORTHO05D007492 7.3e-55 218.0 217 58.5
Gohir.A13G215400 Gossypium hirsutum HOM05D004763 ORTHO05D007492 1.2e-54 217.2 216 57.9
TAR623G1126 Trochodendron aralioides HOM05D004763 ORTHO05D007492 1.2e-54 217.2 217 58.5
BcaB06g26148 Brassica carinata HOM05D004763 ORTHO05D007492 1.6e-54 216.9 219 57.5
TWI34G0672 Tripterygium wilfordii HOM05D004763 ORTHO05D007492 1.6e-54 216.9 218 57.8
CSS0044360 Camellia sinensis var. sinensis HOM05D004763 ORTHO05D007492 2.1e-54 216.5 215 59.1
CiPaw.14G125100 Carya illinoinensis HOM05D004763 ORTHO05D007492 2.1e-54 216.5 218 58.3
Manes.14G014500 Manihot esculenta HOM05D004763 ORTHO05D007492 2.1e-54 216.5 218 57.8
A05p28000 Brassica napus HOM05D004763 ORTHO05D007492 2.8e-54 216.1 221 57.5
GSVIVG01025336001 Vitis vinifera HOM05D004763 ORTHO05D007492 2.8e-54 216.1 214 59.3
BcaC05g28282 Brassica carinata HOM05D004763 ORTHO05D007492 3.6e-54 215.7 219 57.5
C05p43300 Brassica napus HOM05D004763 ORTHO05D007492 3.6e-54 215.7 219 57.5
Cpa.g.sc84.111 Carica papaya HOM05D004763 ORTHO05D007492 4.7e-54 215.3 225 56.4
Duzib150G1218 Durio zibethinus HOM05D004763 ORTHO05D007492 4.7e-54 215.3 216 57.4
CARHR096610 Cardamine hirsuta HOM05D004763 ORTHO05D007492 6.2e-54 214.9 219 56.6
MELO3C014639.2 Cucumis melo HOM05D004763 ORTHO05D007492 6.2e-54 214.9 215 58.1
Sabra03G0153800 Salix brachista HOM05D004763 ORTHO05D007492 8.1e-54 214.5 218 56.4
Sabra03G0156000 Salix brachista HOM05D004763 ORTHO05D007492 8.1e-54 214.5 218 56.4
Sp3g18800 Schrenkiella parvula HOM05D004763 ORTHO05D007492 1.1e-53 214.2 219 56.6
BolC5t33062H Brassica oleracea HOM05D004763 ORTHO05D007492 1.4e-53 213.8 219 57.1
BraA05t21683Z Brassica rapa HOM05D004763 ORTHO05D007492 1.4e-53 213.8 221 57.0
CsaV3_4G023800 Cucumis sativus L. HOM05D004763 ORTHO05D007492 1.4e-53 213.8 221 57.0
Dinv36304 Davidia involucrata HOM05D004763 ORTHO05D007492 1.4e-53 213.8 214 58.9
EL10Ac4g10318 Beta vulgaris HOM05D004763 ORTHO05D007492 2.3e-53 213.0 216 57.9
QL01p006243 Quercus lobata HOM05D004763 ORTHO05D007492 3.1e-53 212.6 218 56.9
Ca_01270_v3 Cicer arietinum L. HOM05D004763 ORTHO05D007492 8.9e-53 211.1 221 59.3
Eucgr.B03662 Eucalyptus grandis HOM05D004763 ORTHO05D007492 8.9e-53 211.1 216 56.5
Thhalv10020214m.g Eutrema salsugineum HOM05D004763 ORTHO05D007492 8.9e-53 211.1 219 56.6
PSO339G3791 Papaver somniferum HOM05D004763 ORTHO05D007492 8.9e-53 211.1 213 57.3
Migut.D00558 Erythranthe guttata HOM05D004763 ORTHO05D007492 1.5e-52 210.3 216 57.4
PGSC0003DMG402029907 Solanum tuberosum HOM05D004763 ORTHO05D007492 1.5e-52 210.3 219 56.2
CAN.G442.1 Capsicum annuum HOM05D004763 ORTHO05D007492 2.0e-52 209.9 220 57.7
Thecc.09G223100 Theobroma cacao HOM05D004763 ORTHO05D007492 2.0e-52 209.9 216 56.9
CANSAT54G1729 Cannabis sativa HOM05D004763 ORTHO05D007492 2.6e-52 209.5 216 57.4
SGA_v2.0_scaffold1G00797 Striga asiatica HOM05D004763 ORTHO05D007492 5.8e-52 208.4 218 55.5
Potri.003G211000 Populus trichocarpa HOM05D004763 ORTHO05D007492 7.5e-52 208.0 218 55.5
Sed0013957 Sechium edule HOM05D004763 ORTHO05D007492 9.8e-52 207.6 215 57.2
Ah.04g161760 Amaranthus hybridus HOM05D004763 ORTHO05D007492 2.2e-51 206.5 216 56.0
Nitab4.5_0003069g0050 Nicotiana tabacum HOM05D004763 ORTHO05D007492 2.2e-51 206.5 214 56.1
Sc09g0000480 Simmondsia chinensis HOM05D004763 ORTHO05D007492 2.2e-51 206.5 219 53.9
Nn7g36058 Nelumbo nucifera HOM05D004763 ORTHO05D007492 2.9e-51 206.1 218 55.5
Peaxi162Scf00773g00119 Petunia axillaris HOM05D004763 ORTHO05D007492 2.9e-51 206.1 219 57.5
Hund22081 Selenicereus undatus HOM05D004763 ORTHO05D007492 2.9e-51 206.1 218 55.0
Solyc01g014490.4 Solanum lycopersicum HOM05D004763 ORTHO05D007492 2.9e-51 206.1 221 56.1
Sopen01g009200 Solanum pennellii HOM05D004763 ORTHO05D007492 2.9e-51 206.1 221 56.1
AUR62019250 Chenopodium quinoa HOM05D004763 ORTHO05D007492 3.7e-51 205.7 217 54.8
Aqoxy1G00185 Aquilegia oxysepala HOM05D004763 ORTHO05D007492 4.9e-51 205.3 213 56.8
ECA238G4453 Erigeron canadensis HOM05D004763 ORTHO05D007492 6.4e-51 204.9 220 54.5
PGR102G0325 Punica granatum HOM05D004763 ORTHO05D007492 6.4e-51 204.9 218 56.4
Ciclev10014511m.g Citrus clementina HOM05D004763 ORTHO05D007492 1.2e-49 200.7 214 55.6
HanXRQChr14g0451781 Helianthus annuus HOM05D004763 ORTHO05D007492 1.2e-49 200.7 223 53.8
RcHm_v2.0_Chr5g0078101 Rosa chinensis HOM05D004763 ORTHO05D007492 3.5e-49 199.1 219 54.3
Actinidia39377 Actinidia chinensis HOM05D004763 ORTHO05D007492 6.0e-49 198.4 215 56.3
HPP92_020536 Vanilla planifolia HOM05D004763 ORTHO05D007492 6.0e-49 198.4 215 53.5
CDE04G0998 Ceratophyllum demersum HOM05D004763 ORTHO05D007492 7.8e-49 198.0 212 54.7
FvH4_3g43550 Fragaria vesca HOM05D004763 ORTHO05D007492 3.0e-48 196.1 219 53.4
FAN11G0713 Fragaria x ananassa HOM05D004763 ORTHO05D007492 3.0e-48 196.1 219 53.4
FAN11G2145 Fragaria x ananassa HOM05D004763 ORTHO05D007492 3.0e-48 196.1 219 53.4
Zm00001eb308780 Zea mays HOM05D004763 ORTHO05D007492 3.9e-48 195.7 221 53.4
Os09g0279600 Oryza sativa ssp. japonica HOM05D004763 ORTHO05D007492 5.1e-48 195.3 218 53.2
FAN16G3272 Fragaria x ananassa HOM05D004763 ORTHO05D007492 8.6e-48 194.5 219 53.0
MD03G1021100 Malus domestica HOM05D004763 ORTHO05D007492 8.6e-48 194.5 215 54.0
Nitab4.5_0006575g0020 Nicotiana tabacum HOM05D004763 ORTHO05D007492 1.9e-47 193.4 237 50.6
SEGI_39045 Sequoiadendron giganteum HOM05D004763 ORTHO05D007492 2.5e-47 193.0 214 53.3
Actinidia06319 Actinidia chinensis HOM05D004763 ORTHO05D007492 4.3e-47 192.2 214 54.2
Prupe.6G018600 Prunus persica HOM05D004763 ORTHO05D007492 2.1e-46 189.9 237 51.9
Aa31LG8G7590 Aethionema arabicum HOM05D004763 ORTHO05D007492 1.4e-45 187.2 190 56.3
ATR0605G091 Amborella trichopoda HOM05D004763 ORTHO05D007492 6.8e-45 184.9 218 53.2
Atru.chr3.2503 Acer truncatum HOM05D004763 ORTHO05D007492 5.8e-44 181.8 217 51.2
Lsat_1_v5_gn_2_101121 Lactuca sativa HOM05D004763 ORTHO05D007492 5.8e-44 181.8 224 50.0
FAN21G2003 Fragaria x ananassa HOM05D004763 ORTHO05D007492 7.6e-44 181.4 206 52.9
Pp3c22_12720 Physcomitrium patens HOM05D004763 ORTHO05D007492 9.9e-44 181.0 217 48.4
Eucgr.B03660 Eucalyptus grandis HOM05D004763 ORTHO05D007492 5.4e-42 175.3 159 61.6
Mapoly0042s0060 Marchantia polymorpha HOM05D004763 ORTHO05D007492 2.1e-41 173.3 212 47.6
Aqoxy381s001 Aquilegia oxysepala HOM05D004763 ORTHO05D007492 2.3e-40 169.9 206 49.0
SMO116G0144 Selaginella moellendorffii HOM05D004763 ORTHO05D007492 2.5e-39 166.4 219 48.4
Rhsim01G0189300 Rhododendron simsii HOM05D004763 ORTHO05D007492 5.6e-39 165.2 216 49.5
AagrBONN_evm.TU.Sc2ySwM_344.3405 Anthoceros agrestis HOM05D004763 ORTHO05D007492 1.4e-37 160.6 214 45.3
Lj1C366G5 Lonicera japonica HOM05D004763 ORTHO05D007492 1.8e-37 160.2 219 48.4
CBR_g31022 Chara braunii HOM05D004763 ORTHO05D007492 1.5e-36 157.1 218 43.1
Cre01.g019750 Chlamydomonas reinhardtii HOM05D004763 ORTHO05D007492 3.1e-29 132.9 141 53.2
PRCOL_00005940 Prasinoderma coloniale HOM05D004763 ORTHO05D007492 4.9e-27 125.6 193 43.5
MCO09G243 Micromonas commoda HOM05D004763 ORTHO05D007492 2.7e-25 119.8 157 46.5
Lsat_1_v5_gn_1_126941 Lactuca sativa HOM05D004763 ORTHO05D007492 1.1e-21 107.8 111 52.3
Potri.T085401 Populus trichocarpa HOM05D004763 ORTHO05D007492 1.1e-21 107.8 96 62.5
Lsat_1_v5_gn_1_127001 Lactuca sativa HOM05D004763 ORTHO05D007492 7.1e-18 95.1 94 54.3
Lsat_1_v5_gn_1_127121 Lactuca sativa HOM05D004763 ORTHO05D007492 2.1e-14 83.6 68 61.8
Lsat_1_v5_gn_1_127161 Lactuca sativa HOM05D004763 ORTHO05D007492 3.1e-13 79.7 111 44.1


User provided reference genes

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