Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 1.2e-67 259.6 124 100.0
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 2.2e-45 185.7 94 91.5
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 5.5e-44 181.0 95 90.5
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 3.3e-41 171.8 94 83.0
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 6.3e-40 167.5 95 81.1
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 2.9e-37 158.7 98 75.5
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 9.4e-36 153.7 89 75.3
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 4.7e-35 151.4 98 73.5
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 4.7e-35 151.4 98 73.5
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 1.4e-34 149.8 89 74.2
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 1.8e-34 149.4 89 70.8
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 1.8e-34 149.4 89 70.8
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 6.7e-34 147.5 92 69.6
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 1.5e-33 146.4 92 71.7
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.5e-33 146.4 90 71.1
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.5e-33 146.4 90 71.1
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 2.0e-33 146.0 89 69.7
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 2.0e-33 146.0 95 67.4
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 3.3e-33 145.2 92 71.7
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.2e-32 142.5 90 71.1
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 3.7e-32 141.7 89 67.4
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 8.2e-32 140.6 92 65.2
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 8.2e-32 140.6 95 65.3
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 1.1e-31 140.2 92 68.5
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.1e-31 140.2 93 69.9
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 1.1e-31 140.2 90 70.0
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 1.1e-31 140.2 89 67.4
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 1.4e-31 139.8 90 67.8
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 1.4e-31 139.8 89 67.4
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 1.8e-31 139.4 92 69.6
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 1.8e-31 139.4 92 69.6
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 1.8e-31 139.4 93 68.8
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 3.1e-31 138.7 91 67.0
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 3.1e-31 138.7 92 67.4
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 4.1e-31 138.3 90 66.7
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 4.1e-31 138.3 90 68.9
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 5.3e-31 137.9 92 63.0
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 7.0e-31 137.5 92 65.2
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 1.6e-30 136.3 98 65.3
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 1.6e-30 136.3 98 65.3
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 2.0e-30 136.0 92 66.3
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 2.6e-30 135.6 98 60.2
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 4.5e-30 134.8 95 61.1
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 7.7e-30 134.0 92 60.9
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 7.7e-30 134.0 90 66.7
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 7.7e-30 134.0 97 60.8
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 1.0e-29 133.7 89 66.3
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 1.0e-29 133.7 89 66.3
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 1.7e-29 132.9 92 58.7
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 1.7e-29 132.9 89 65.2
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 1.7e-29 132.9 89 65.2
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 1.7e-29 132.9 92 66.3
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 2.2e-29 132.5 96 62.5
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 2.2e-29 132.5 96 62.5
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 2.9e-29 132.1 92 60.9
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 2.9e-29 132.1 98 60.2
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 3.8e-29 131.7 98 59.2
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.8e-29 131.7 80 75.0
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 3.8e-29 131.7 89 65.2
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 3.8e-29 131.7 89 65.2
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 3.8e-29 131.7 94 61.7
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 5.0e-29 131.3 92 58.7
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 5.0e-29 131.3 89 65.2
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 6.5e-29 131.0 92 59.8
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 6.5e-29 131.0 97 59.8
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 8.5e-29 130.6 98 56.1
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 8.5e-29 130.6 93 62.4
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 1.1e-28 130.2 90 63.3
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 1.1e-28 130.2 104 58.7
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 1.5e-28 129.8 92 58.7
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 1.5e-28 129.8 92 58.7
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 1.5e-28 129.8 95 62.1
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 1.9e-28 129.4 92 58.7
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 1.9e-28 129.4 99 57.6
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 3.2e-28 128.6 98 57.1
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 5.5e-28 127.9 117 55.6
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 5.5e-28 127.9 96 60.4
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 5.5e-28 127.9 89 64.0
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 7.2e-28 127.5 99 55.6
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 9.4e-28 127.1 92 57.6
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 9.4e-28 127.1 92 57.6
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 9.4e-28 127.1 94 62.8
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 1.2e-27 126.7 92 57.6
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 1.6e-27 126.3 98 62.2
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 2.1e-27 125.9 93 61.3
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.7e-27 125.6 89 61.8
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 4.7e-27 124.8 100 58.0
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 2.3e-26 122.5 96 58.3
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 3.0e-26 122.1 93 55.9
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 5.2e-26 121.3 91 60.4
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.1e-25 120.2 102 53.9
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 2.6e-25 119.0 111 54.1
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 9.7e-25 117.1 97 54.6
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 9.7e-25 117.1 95 52.6
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 3.5e-22 108.6 96 50.0
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 3.5e-22 108.6 98 49.0
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 1.1e-20 103.6 84 54.8
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 2.7e-19 99.0 89 56.2
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 3.0e-18 95.5 98 49.0
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 1.2e-17 93.6 95 45.3
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 3.7e-16 88.6 98 48.0
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 1.4e-15 86.7 89 39.3
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 5.9e-14 81.3 79 40.5
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 3.8e-13 78.6 49 69.4
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 1.0e-10 70.5 68 48.5
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 1.8e-10 69.7 49 63.3
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 8.8e-10 67.4 47 61.7
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 1.2e-09 67.0 52 50.0
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 9.8e-09 63.9 90 41.1
Pp3c19_13839 Physcomitrium patens HOM05D006635 ORTHO05D008047 7.7e-06 54.3 110 32.7


User provided reference genes

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