Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26039 Trifolium pratense HOM05D004869 ORTHO05D005893 0.0e+00 1179.1 588 100.0
Ca_01910_v3 Cicer arietinum L. HOM05D004869 ORTHO05D005893 3.1e-307 1057.7 589 86.9
Glyma.15G150900 Glycine max HOM05D004869 ORTHO05D005893 4.0e-294 1014.2 588 81.3
Lj6g0019427 Lotus japonicus HOM05D004869 ORTHO05D005893 5.4e-291 1003.8 589 80.6
Glyma.09G042000 Glycine max HOM05D004869 ORTHO05D005893 4.6e-290 1000.7 588 80.4
arahy.Tifrunner.gnm1.ann1.ZXWI6N Arachis hypogaea HOM05D004869 ORTHO05D005893 3.9e-289 997.7 588 83.2
VMungo1309G2596 Vigna mungo HOM05D004869 ORTHO05D005893 1.1e-286 989.6 588 78.9
Phvul.009G250700 Phaseolus vulgaris HOM05D004869 ORTHO05D005893 1.5e-285 985.7 585 79.5
Lalb_Chr20g0117401 Lupinus albus HOM05D004869 ORTHO05D005893 1.9e-283 978.8 588 81.5
Lalb_Chr15g0086081 Lupinus albus HOM05D004869 ORTHO05D005893 1.3e-281 972.6 588 80.3
COL.COLO4_13820 Corchorus olitorius HOM05D004869 ORTHO05D005893 1.2e-261 906.4 586 72.0
Medtr2g435800 Medicago truncatula HOM05D004869 ORTHO05D005893 1.9e-259 899.0 486 91.2
MD16G1164100 Malus domestica HOM05D004869 ORTHO05D005893 2.7e-258 895.2 590 70.8
Prupe.1G131800 Prunus persica HOM05D004869 ORTHO05D005893 3.5e-258 894.8 590 70.7
Atru.chr4.2905 Acer truncatum HOM05D004869 ORTHO05D005893 4.6e-258 894.4 586 72.2
Dinv44350 Davidia involucrata HOM05D004869 ORTHO05D005893 4.6e-258 894.4 591 72.3
Thecc.04G289100 Theobroma cacao HOM05D004869 ORTHO05D005893 7.9e-258 893.6 588 71.4
FvH4_4g18700 Fragaria vesca HOM05D004869 ORTHO05D005893 1.3e-257 892.9 592 70.6
FAN12G0537 Fragaria x ananassa HOM05D004869 ORTHO05D005893 3.7e-255 884.8 601 69.6
MD13G1164300 Malus domestica HOM05D004869 ORTHO05D005893 3.7e-255 884.8 590 70.7
CANSAT78G0178 Cannabis sativa HOM05D004869 ORTHO05D005893 6.2e-255 884.0 591 70.2
CiPaw.01G145300 Carya illinoinensis HOM05D004869 ORTHO05D005893 1.1e-254 883.2 591 69.9
RcHm_v2.0_Chr4g0423401 Rosa chinensis HOM05D004869 ORTHO05D005893 5.3e-254 880.9 592 69.4
Ciclev10004291m.g Citrus clementina HOM05D004869 ORTHO05D005893 9.0e-254 880.2 588 74.5
Duzib212G0051 Durio zibethinus HOM05D004869 ORTHO05D005893 9.0e-254 880.2 588 71.1
TWI73G0801 Tripterygium wilfordii HOM05D004869 ORTHO05D005893 9.0e-254 880.2 591 69.9
QL06p010392 Quercus lobata HOM05D004869 ORTHO05D005893 1.5e-253 879.4 591 70.4
Sc19g0005490 Simmondsia chinensis HOM05D004869 ORTHO05D005893 1.5e-253 879.4 590 68.5
Cfa015427 Carpinus fangiana HOM05D004869 ORTHO05D005893 2.6e-253 878.6 592 70.3
Hma1.2p1_1352F.1_g277460 Hydrangea macrophylla HOM05D004869 ORTHO05D005893 3.4e-253 878.2 589 71.6
Actinidia40299 Actinidia chinensis HOM05D004869 ORTHO05D005893 4.5e-253 877.9 591 70.4
Gorai.005G061800 Gossypium raimondii HOM05D004869 ORTHO05D005893 8.4e-252 873.6 588 69.9
FAN17G0377 Fragaria x ananassa HOM05D004869 ORTHO05D005893 3.2e-251 871.7 609 67.7
FAN12G1313 Fragaria x ananassa HOM05D004869 ORTHO05D005893 7.1e-251 870.5 631 66.4
Rhsim04G0226400 Rhododendron simsii HOM05D004869 ORTHO05D005893 7.1e-251 870.5 588 69.4
Sed0001345 Sechium edule HOM05D004869 ORTHO05D005893 1.2e-250 869.8 593 69.0
ClCG05G006260 Citrullus lanatus HOM05D004869 ORTHO05D005893 2.7e-250 868.6 591 69.7
MELO3C006684.2 Cucumis melo HOM05D004869 ORTHO05D005893 4.6e-250 867.8 591 69.4
CsaV3_3G014880 Cucumis sativus L. HOM05D004869 ORTHO05D005893 4.6e-250 867.8 591 69.0
Gohir.A02G051000 Gossypium hirsutum HOM05D004869 ORTHO05D005893 6.0e-250 867.5 587 69.3
GSVIVG01035107001 Vitis vinifera HOM05D004869 ORTHO05D005893 1.3e-249 866.3 584 69.3
Sabra10G0006600 Salix brachista HOM05D004869 ORTHO05D005893 1.1e-248 863.2 591 68.2
Psat1g156400 Pisum sativum HOM05D004869 ORTHO05D005893 2.5e-248 862.1 489 86.7
CAN.G449.73 Capsicum annuum HOM05D004869 ORTHO05D005893 4.3e-248 861.3 590 71.5
Nn3g21544 Nelumbo nucifera HOM05D004869 ORTHO05D005893 4.3e-248 861.3 595 68.4
A05p41290 Brassica napus HOM05D004869 ORTHO05D005893 7.4e-248 860.5 586 70.0
Aqoxy5G00789 Aquilegia oxysepala HOM05D004869 ORTHO05D005893 9.6e-248 860.1 593 70.2
BraA05t22852Z Brassica rapa HOM05D004869 ORTHO05D005893 9.6e-248 860.1 586 70.0
Cpa.g.sc50.161 Carica papaya HOM05D004869 ORTHO05D005893 1.3e-247 859.8 588 69.0
Thhalv10020074m.g Eutrema salsugineum HOM05D004869 ORTHO05D005893 1.3e-247 859.8 588 69.4
Solyc05g054370.2 Solanum lycopersicum HOM05D004869 ORTHO05D005893 1.6e-247 859.4 590 68.3
CARHR081430 Cardamine hirsuta HOM05D004869 ORTHO05D005893 2.8e-247 858.6 587 70.0
Ciclev10004342m.g Citrus clementina HOM05D004869 ORTHO05D005893 2.8e-247 858.6 585 70.4
C05p60510 Brassica napus HOM05D004869 ORTHO05D005893 3.7e-247 858.2 586 70.1
Carub.0003s0635 Capsella rubella HOM05D004869 ORTHO05D005893 4.8e-247 857.8 592 68.9
Eucgr.B01578 Eucalyptus grandis HOM05D004869 ORTHO05D005893 4.8e-247 857.8 594 68.0
Sopen05g032860 Solanum pennellii HOM05D004869 ORTHO05D005893 4.8e-247 857.8 590 68.1
Peaxi162Scf00065g01213 Petunia axillaris HOM05D004869 ORTHO05D005893 8.2e-247 857.1 590 69.0
Potri.008G219000 Populus trichocarpa HOM05D004869 ORTHO05D005893 8.2e-247 857.1 590 68.0
AT3G06810 Arabidopsis thaliana HOM05D004869 ORTHO05D005893 1.4e-246 856.3 587 69.0
AL3G17930 Arabidopsis lyrata HOM05D004869 ORTHO05D005893 3.1e-246 855.1 587 68.7
PGSC0003DMG400023436 Solanum tuberosum HOM05D004869 ORTHO05D005893 3.1e-246 855.1 590 68.0
Potri.010G010448 Populus trichocarpa HOM05D004869 ORTHO05D005893 4.0e-246 854.7 586 68.8
THA.LOC104802695 Tarenaya hassleriana HOM05D004869 ORTHO05D005893 5.3e-246 854.4 586 68.4
ECA246G3101 Erigeron canadensis HOM05D004869 ORTHO05D005893 1.2e-245 853.2 590 68.6
BolC5t34705H Brassica oleracea HOM05D004869 ORTHO05D005893 1.5e-245 852.8 586 69.8
PSO210G1050 Papaver somniferum HOM05D004869 ORTHO05D005893 2.6e-245 852.0 587 68.3
Gohir.D02G055900 Gossypium hirsutum HOM05D004869 ORTHO05D005893 1.3e-244 849.7 588 68.4
PSO832G2232 Papaver somniferum HOM05D004869 ORTHO05D005893 1.7e-244 849.4 592 68.1
TWI53G1493 Tripterygium wilfordii HOM05D004869 ORTHO05D005893 4.9e-244 847.8 590 67.8
vmacro08186 Vaccinium macrocarpon HOM05D004869 ORTHO05D005893 1.9e-243 845.9 610 66.6
Sopen01g027900 Solanum pennellii HOM05D004869 ORTHO05D005893 4.2e-243 844.7 590 68.1
Oeu016255.1 Olea europaea HOM05D004869 ORTHO05D005893 1.6e-242 842.8 597 67.8
DCAR_027053 Daucus carota HOM05D004869 ORTHO05D005893 2.1e-242 842.4 587 69.0
HanXRQChr17g0535991 Helianthus annuus HOM05D004869 ORTHO05D005893 2.1e-242 842.4 586 68.4
Lsat_1_v5_gn_3_21560 Lactuca sativa HOM05D004869 ORTHO05D005893 2.1e-242 842.4 595 67.9
Cc03_g01500 Coffea canephora HOM05D004869 ORTHO05D005893 3.5e-242 841.6 590 68.3
Solyc01g066310.4 Solanum lycopersicum HOM05D004869 ORTHO05D005893 1.8e-241 839.3 590 67.8
Sp3g05780 Schrenkiella parvula HOM05D004869 ORTHO05D005893 3.0e-241 838.6 587 68.3
Nitab4.5_0008670g0020 Nicotiana tabacum HOM05D004869 ORTHO05D005893 1.1e-240 836.6 587 68.3
Aa31LG5G17400 Aethionema arabicum HOM05D004869 ORTHO05D005893 1.5e-240 836.3 588 68.5
Lj6A681T39 Lonicera japonica HOM05D004869 ORTHO05D005893 7.4e-240 833.9 631 64.5
Nitab4.5_0000695g0140 Nicotiana tabacum HOM05D004869 ORTHO05D005893 9.0e-238 827.0 586 68.1
Migut.N00074 Erythranthe guttata HOM05D004869 ORTHO05D005893 1.2e-237 826.6 589 66.9
Hund20507 Selenicereus undatus HOM05D004869 ORTHO05D005893 2.9e-236 822.0 591 65.3
EL10Ac3g06663 Beta vulgaris HOM05D004869 ORTHO05D005893 2.0e-232 809.3 591 64.1
Zm00001eb111400 Zea mays HOM05D004869 ORTHO05D005893 4.3e-232 808.1 593 64.9
CDE11G0521 Ceratophyllum demersum HOM05D004869 ORTHO05D005893 1.8e-230 802.7 592 65.0
Os07g0675000 Oryza sativa ssp. japonica HOM05D004869 ORTHO05D005893 4.1e-230 801.6 593 64.1
ATR0693G241 Amborella trichopoda HOM05D004869 ORTHO05D005893 3.8e-228 795.0 586 65.2
arahy.Tifrunner.gnm1.ann1.YH0B1H Arachis hypogaea HOM05D004869 ORTHO05D005893 2.5e-227 792.3 547 74.2
MBI18_g44774_MAGBIO Magnolia biondii HOM05D004869 ORTHO05D005893 1.4e-225 786.6 634 60.6
SGA_v2.0_scaffold119G32706 Striga asiatica HOM05D004869 ORTHO05D005893 2.6e-213 745.7 561 64.5
AUR62015247 Chenopodium quinoa HOM05D004869 ORTHO05D005893 3.5e-213 745.3 591 60.9
AUR62018045 Chenopodium quinoa HOM05D004869 ORTHO05D005893 4.5e-213 745.0 591 61.1
Manes.03G198800 Manihot esculenta HOM05D004869 ORTHO05D005893 7.5e-208 727.6 592 60.5
HPP92_003120 Vanilla planifolia HOM05D004869 ORTHO05D005893 1.7e-207 726.5 587 61.7
Pp3c18_21710 Physcomitrium patens HOM05D004869 ORTHO05D005893 1.5e-200 703.4 586 58.4
Pp3c22_4180 Physcomitrium patens HOM05D004869 ORTHO05D005893 3.4e-200 702.2 591 57.5
TAR365G0733 Trochodendron aralioides HOM05D004869 ORTHO05D005893 2.8e-199 699.1 588 58.3
SMO202G0033 Selaginella moellendorffii HOM05D004869 ORTHO05D005893 4.5e-197 691.8 587 57.9
AagrBONN_evm.TU.Sc2ySwM_228.2629 Anthoceros agrestis HOM05D004869 ORTHO05D005893 2.9e-196 689.1 587 56.9
Mapoly0111s0015 Marchantia polymorpha HOM05D004869 ORTHO05D005893 1.2e-192 677.2 587 54.3
Ah.04g153720 Amaranthus hybridus HOM05D004869 ORTHO05D005893 7.5e-192 674.5 619 54.8
SHI00220 Sapria himalayana HOM05D004869 ORTHO05D005893 1.2e-186 657.1 522 60.2
Haze_01165 Corylus avellana HOM05D004869 ORTHO05D005893 2.3e-169 599.7 588 54.3
SMO169G0300 Selaginella moellendorffii HOM05D004869 ORTHO05D005893 1.6e-165 587.0 597 52.6
CBR_g54445 Chara braunii HOM05D004869 ORTHO05D005893 4.6e-157 558.9 685 45.3
CSS0035117 Camellia sinensis var. sinensis HOM05D004869 ORTHO05D005893 9.0e-137 491.5 355 68.2
BcaNung06666 Brassica carinata HOM05D004869 ORTHO05D005893 6.7e-132 475.3 342 68.1
DCAR_000477 Daucus carota HOM05D004869 ORTHO05D005893 1.2e-128 464.5 338 65.7
Cre16.g675850 Chlamydomonas reinhardtii HOM05D004869 ORTHO05D005893 1.3e-127 461.1 717 38.2
Hma1.2p1_0804F.1_g221110 Hydrangea macrophylla HOM05D004869 ORTHO05D005893 2.3e-124 450.3 290 72.4
Oeu031983.1 Olea europaea HOM05D004869 ORTHO05D005893 1.1e-123 448.0 418 55.3
unitig_26.g10563 Utricularia gibba HOM05D004869 ORTHO05D005893 1.2e-120 438.0 340 62.9
PRCOL_00002960 Prasinoderma coloniale HOM05D004869 ORTHO05D005893 1.4e-116 424.5 602 40.0
BcaC05g30559 Brassica carinata HOM05D004869 ORTHO05D005893 6.5e-103 379.0 361 54.8
DCAR_023301 Daucus carota HOM05D004869 ORTHO05D005893 1.7e-87 327.8 225 68.0
MCO01G041 Micromonas commoda HOM05D004869 ORTHO05D005893 4.6e-72 276.6 277 50.5
Cfa024444 Carpinus fangiana HOM05D004869 ORTHO05D005893 2.3e-60 237.7 184 58.7
QL06p007479 Quercus lobata HOM05D004869 ORTHO05D005893 3.2e-57 227.3 121 86.0
Cfa022681 Carpinus fangiana HOM05D004869 ORTHO05D005893 5.1e-55 219.9 184 53.8
SEGI_30643 Sequoiadendron giganteum HOM05D004869 ORTHO05D005893 4.3e-54 216.9 185 59.5
Nn1g04010 Nelumbo nucifera HOM05D004869 ORTHO05D005893 2.2e-50 204.5 115 80.0
MBI18_g37159_MAGBIO Magnolia biondii HOM05D004869 ORTHO05D005893 5.1e-47 193.4 264 46.2
unitig_26.g10564 Utricularia gibba HOM05D004869 ORTHO05D005893 1.1e-36 159.1 125 55.2
Medtr2g436030 Medicago truncatula HOM05D004869 ORTHO05D005893 8.4e-34 149.4 78 88.5
MCO01G771 Micromonas commoda HOM05D004869 ORTHO05D005893 1.3e-31 142.1 254 33.9
TPR.G25902 Trifolium pratense HOM05D000002 ORTHO05D000001 1.3e-31 142.1 73 89.0
HanXRQChr01g0024801 Helianthus annuus HOM05D004869 ORTHO05D005893 2.8e-29 134.4 178 41.0
Rhsim04G0225600 Rhododendron simsii HOM05D004869 ORTHO05D005893 1.7e-26 125.2 70 80.0
Lsat_1_v5_gn_5_23780 Lactuca sativa HOM05D004869 ORTHO05D005893 3.0e-23 114.4 165 41.8
SEGI_25692 Sequoiadendron giganteum HOM05D004869 ORTHO05D005893 1.1e-22 112.5 102 48.0
QL93p0200_0027 Quercus lobata HOM05D004869 ORTHO05D005893 6.5e-18 96.7 53 83.0
Lsat_1_v5_gn_4_34540 Lactuca sativa HOM05D004869 ORTHO05D005893 2.7e-16 91.3 197 32.5
Atru.chr3.3676 Acer truncatum HOM05D001528 ORTHO05D006464 1.3e-13 82.4 178 30.9
RcHm_v2.0_Chr3g0480631 Rosa chinensis HOM05D004869 ORTHO05D005893 1.6e-13 82.0 47 78.7
Zm00001eb265270 Zea mays HOM05D001528 ORTHO05D006464 1.8e-12 78.6 140 31.4
AUR62025007 Chenopodium quinoa HOM05D001528 ORTHO05D006464 4.1e-12 77.4 140 32.1
Zm00001eb355050 Zea mays HOM05D001528 ORTHO05D006464 9.0e-12 76.3 140 30.7
PRCOL_00006365 Prasinoderma coloniale HOM05D001528 ORTHO05D006464 1.2e-11 75.9 178 28.7
Lj3g0021237 Lotus japonicus HOM05D001528 ORTHO05D006464 2.6e-11 74.7 150 29.3
Medtr4g060480 Medicago truncatula HOM05D001528 ORTHO05D006464 3.4e-11 74.3 140 30.7
Haze_27126 Corylus avellana HOM05D001528 ORTHO05D006464 4.5e-11 73.9 179 28.5
CAN.G65.194 Capsicum annuum HOM05D001528 ORTHO05D006464 5.9e-11 73.6 140 31.4
Nitab4.5_0002368g0160 Nicotiana tabacum HOM05D001528 ORTHO05D006464 5.9e-11 73.6 140 32.1
PGSC0003DMG400026901 Solanum tuberosum HOM05D001528 ORTHO05D006464 5.9e-11 73.6 140 31.4
Peaxi162Scf00351g00225 Petunia axillaris HOM05D001528 ORTHO05D006464 1.3e-10 72.4 140 30.0
Solyc06g073560.4 Solanum lycopersicum HOM05D001528 ORTHO05D006464 1.7e-10 72.0 140 31.4
Sopen06g029920 Solanum pennellii HOM05D001528 ORTHO05D006464 1.7e-10 72.0 140 31.4
arahy.Tifrunner.gnm1.ann1.792I4R Arachis hypogaea HOM05D001528 ORTHO05D006464 2.2e-10 71.6 140 30.0
CAN.G631.6 Capsicum annuum HOM05D001528 ORTHO05D006464 2.9e-10 71.2 140 29.3
Cre06.g296400 Chlamydomonas reinhardtii HOM05D001528 ORTHO05D006464 2.9e-10 71.2 147 29.3
PGSC0003DMG400008113 Solanum tuberosum HOM05D001528 ORTHO05D006464 2.9e-10 71.2 140 30.7
arahy.Tifrunner.gnm1.ann1.C0Z8UU Arachis hypogaea HOM05D001528 ORTHO05D006464 3.8e-10 70.9 140 30.0
Solyc11g069180.2 Solanum lycopersicum HOM05D001528 ORTHO05D006464 1.1e-09 69.3 140 29.3
Sopen11g027920 Solanum pennellii HOM05D001528 ORTHO05D006464 1.1e-09 69.3 140 29.3
Haze_26447 Corylus avellana HOM05D001528 ORTHO05D006464 3.2e-09 67.8 191 28.3
Hma1.2p1_1662F.1_g296280 Hydrangea macrophylla HOM05D004869 ORTHO05D005893 4.2e-09 67.4 54 57.4
Nitab4.5_0000999g0110 Nicotiana tabacum HOM05D001528 ORTHO05D006464 5.5e-09 67.0 139 29.5
SMO367G1086 Selaginella moellendorffii HOM05D001528 ORTHO05D006464 7.2e-09 66.6 152 31.6
Mapoly0154s0036 Marchantia polymorpha HOM05D001528 ORTHO05D006464 1.3e-07 62.4 147 32.0
Medtr0837s0010 Medicago truncatula HOM05D001528 ORTHO05D006464 1.8e-07 62.0 122 34.4
Pp3c3_14940 Physcomitrium patens HOM05D001528 ORTHO05D006464 1.8e-07 62.0 144 31.2
RcHm_v2.0_Chr6g0311831 Rosa chinensis HOM05D004869 ORTHO05D005893 2.5e-06 58.2 37 73.0
PRCOL_00002017 Prasinoderma coloniale HOM05D001528 ORTHO05D006464 5.7e-06 57.0 143 30.8


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