Gene: Sopen11g027920

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen11g027920
  • Transcript Identifier Sopen11g027920.1
  • Gene Type Coding gene
  • Location Spenn-ch11 : 63586641-63593690 : positive

Gene Family Information

  • ID HOM05D001528
  • #Genes/#Species 416/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen11g027920.1

Descriptions

  • Description Isovaleryl-CoA dehydrogenase 2, mitochondrial precursor (EC 1.3.99.10) (IVD 2) (Fragment) - Solanum tuberosum (Potato), Encodes isovaleryl-coenzyme a dehydrogenase. Mutants have increases in 12 seed free amino acids, accumulation of seed homomethionine and 3-isovaleroyloxypropyl-glucosinolate, with a concomitant decrease in seed 3-benzoyloxypropyl-glucosinolate. | isovaleryl-CoA-dehydrogenase (IVD) | FUNCTIONS IN: isovaleryl-CoA dehydrogenase activity, ATP binding | INVOLVED IN: leucine catabolic process | LOCATED IN: mitochondrion, mitochondrial matrix | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal , Acyl-CoA oxidase/dehydrogenase, type 1 , Acyl-CoA dehydrogenase/oxidase, N-terminal , Acyl-CoA dehydrogenase/oxidase , Acyl-CoA oxidase/dehydrogenase, central domain , Acyl-CoA dehydrogenase, conserved site , Acyl-CoA dehydrogenase/oxidase C-terminal , Acyl-CoA dehydrogenase, N-terminal | BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 4
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1902196
ISO
PLAZA Integrative Orthologyisovaleryl-CoA(4-) catabolic process PGSC0003DMG400008113
GO:0009083
ISO
PLAZA Integrative Orthologybranched-chain amino acid catabolic process AT3G45300
GO:1902198
ISO
PLAZA Integrative Orthology3-methylbut-2-enoyl-CoA(4-) metabolic process PGSC0003DMG400008113
GO:0006552
ISO
PLAZA Integrative Orthologyleucine catabolic process AT3G45300

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016627
IEA
InterProoxidoreductase activity, acting on the CH-CH group of donors
GO:0050660
IEA
InterProflavin adenine dinucleotide binding
GO:0003995
IEA
InterProacyl-CoA dehydrogenase activity
GO:0008470
ISO
PLAZA Integrative Orthologyisovaleryl-CoA dehydrogenase activity AT3G45300
GO:0005524
ISO
PLAZA Integrative OrthologyATP binding AT3G45300

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005759
ISO
PLAZA Integrative Orthologymitochondrial matrix AT3G45300
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G45300

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal
IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily
IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain
IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal
IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily
IPR036250 Acyl-CoA dehydrogenase-like, C-terminal
IPR034183 Isovaleryl-CoA dehydrogenase
Mapman id Description
4.2.7.3 Amino acid metabolism.degradation.branched-chain amino acid.isovaleryl-CoA-dehydrogenase (IVDH)