Gene: Sopen05g032860

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen05g032860
  • Transcript Identifier Sopen05g032860.1
  • Gene Type Coding gene
  • Location Spenn-ch05 : 76263934-76272244 : negative

Gene Family Information

  • ID HOM05D004869
  • #Genes/#Species 152/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen05g032860.1

Descriptions

  • Description Encodes a protein with similarity to acyl-CoA dehydrogenases. Mutations in IBR3 render plants resistant to indole-3-butryic acid, a putative storage form of the biologically active auxin IAA (indole-3-acetic acid). IBR3 is hypothesized to carry out the second step in a, #946, -oxidation-like process of IBA metabolism in Arabidopsis. Though its subcellular location has not been determined, IBR3 has a peroxisomal targeting sequence and two other putative IBA metabolic enzymes (IBR1 and IBR10) can be found in this organelle. No specific enzymatic activity has been documented for IBR3, but double mutant analyses with CHY1 argue against a role for IBR3 in general fatty acid, #946, -oxidation. | IBA-RESPONSE 3 (IBR3) | FUNCTIONS IN: acyl-CoA dehydrogenase activity, oxidoreductase activity | INVOLVED IN: root hair elongation | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal , Acyl-CoA oxidase/dehydrogenase, type 1 , Acyl-CoA dehydrogenase/oxidase , Acyl-CoA dehydrogenase/oxidase, N-terminal , Acyl-CoA oxidase/dehydrogenase, central domain , Acyl-CoA dehydrogenase/oxidase C-terminal , Protein kinase-like domain , Acyl-CoA dehydrogenase, N-terminal , Aminoglycoside phosphotransferase | BEST Arabidopsis thaliana protein match is: isovaleryl-CoA-dehydrogenase
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048767
ISO
PLAZA Integrative Orthologyroot hair elongation AT3G06810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016627
IEA
InterProoxidoreductase activity, acting on the CH-CH group of donors
GO:0050660
IEA
InterProflavin adenine dinucleotide binding
GO:0003995
ISO
PLAZA Integrative Orthologyacyl-CoA dehydrogenase activity AT3G06810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily
IPR036250 Acyl-CoA dehydrogenase-like, C-terminal
IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain
IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal
IPR041726 Acyl-CoA dehydrogenase family member 10/11, N-terminal
IPR011009 Protein kinase-like domain superfamily
IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal
IPR002575 Aminoglycoside phosphotransferase
IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily
Mapman id Description
5.7.3.3.2 Lipid metabolism.lipid degradation.fatty acid degradation.alternative beta-oxidation.monofunctionial hydroxyacyl-CoA dehydrogenase