Gene: AT3G06810

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G06810
  • Transcript Identifier AT3G06810.1
  • Gene Type Coding gene
  • Location Chr3 : 2146534-2150654 : positive

Gene Family Information

  • ID HOM05D004869
  • #Genes/#Species 152/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G06810.1
  • symbol IBR3
  • full_name IBA-RESPONSE 3
  • uniprot Q8RWZ3

Descriptions

  • Description acyl-CoA dehydrogenase-like protein
  • Computational description IBA-RESPONSE 3 (IBR3); FUNCTIONS IN: acyl-CoA dehydrogenase activity, oxidoreductase activity; INVOLVED IN: root hair elongation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Protein kinase-like domain (InterPro:IPR011009), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092), Aminoglycoside phosphotransferase (InterPro:IPR002575); BEST Arabidopsis thaliana protein match is: isovaleryl-CoA-dehydrogenase (TAIR:AT3G45300.1); Has 35245 Blast hits to 35197 proteins in 1774 species: Archae - 552; Bacteria - 22616; Metazoa - 1388; Fungi - 871; Plants - 174; Viruses - 0; Other Eukaryotes - 9644 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048767
IMP
Gene Ontologyroot hair elongation1
GO:0006629
IEA
GOA Databaselipid metabolic process
GO:0006631
IEA
GOA Databasefatty acid metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016627
IEA
Gene Ontologyoxidoreductase activity, acting on the CH-CH group of donors
GO:0016627
IEA
InterProoxidoreductase activity, acting on the CH-CH group of donors
GO:0050660
IEA
Gene Ontologyflavin adenine dinucleotide binding
GO:0050660
IEA
InterProflavin adenine dinucleotide binding
GO:0003995
IGI
Gene Ontologyacyl-CoA dehydrogenase activity2
GO:0016491
IEA
GOA Databaseoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISM
Gene Ontologymitochondrion
GO:0005829
RCA
Gene Ontologycytosol3
GO:0005777
IEA
GOA Databaseperoxisome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011009 Protein kinase-like domain superfamily
IPR002575 Aminoglycoside phosphotransferase
IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal
IPR036250 Acyl-CoA dehydrogenase-like, C-terminal
IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal
IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain
IPR041726 Acyl-CoA dehydrogenase family member 10/11, N-terminal
IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily
IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily
Mapman id Description
5.7.3.3.2 Lipid metabolism.lipid degradation.fatty acid degradation.alternative beta-oxidation.monofunctionial hydroxyacyl-CoA dehydrogenase