Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24949 Trifolium pratense HOM05D005235 ORTHO05D006938 1.5e-281 972.2 497 100.0
Psat5g150600 Pisum sativum HOM05D005235 ORTHO05D006938 1.1e-265 919.5 500 94.6
Medtr3g466250 Medicago truncatula HOM05D005235 ORTHO05D006938 6.9e-255 883.6 503 91.3
Ca_15026_v3 Cicer arietinum L. HOM05D005235 ORTHO05D006938 8.4e-253 876.7 502 90.6
Lj6g0011193 Lotus japonicus HOM05D005235 ORTHO05D006938 1.3e-245 852.8 505 88.1
Medtr4g121070 Medicago truncatula HOM05D005235 ORTHO05D006938 4.9e-245 850.9 501 89.6
Lj3g0002085 Lotus japonicus HOM05D005235 ORTHO05D006938 5.8e-238 827.4 510 85.7
Lalb_Chr15g0085971 Lupinus albus HOM05D005235 ORTHO05D006938 2.7e-227 792.0 520 81.3
Glyma.14G202100 Glycine max HOM05D005235 ORTHO05D006938 3.2e-220 768.5 504 81.3
arahy.Tifrunner.gnm1.ann1.0Z73T7 Arachis hypogaea HOM05D005235 ORTHO05D006938 3.7e-216 755.0 504 79.8
Glyma.02G234500 Glycine max HOM05D005235 ORTHO05D006938 3.1e-215 751.9 492 81.1
arahy.Tifrunner.gnm1.ann1.354T1Y Arachis hypogaea HOM05D005235 ORTHO05D006938 2.0e-214 749.2 508 80.5
VMungo0647G1084 Vigna mungo HOM05D005235 ORTHO05D006938 2.9e-213 745.3 491 78.6
Phvul.008G249300 Phaseolus vulgaris HOM05D005235 ORTHO05D006938 4.4e-209 731.5 491 77.4
Manes.04G096400 Manihot esculenta HOM05D005235 ORTHO05D006938 6.8e-202 707.6 458 79.3
Potri.014G140400 Populus trichocarpa HOM05D005235 ORTHO05D006938 1.5e-201 706.4 516 73.4
PGR142G4255 Punica granatum HOM05D005235 ORTHO05D006938 1.1e-199 700.3 492 75.0
Eucgr.I01565 Eucalyptus grandis HOM05D005235 ORTHO05D006938 1.8e-199 699.5 486 74.5
Gohir.D01G037300 Gossypium hirsutum HOM05D005235 ORTHO05D006938 1.8e-199 699.5 505 72.9
Gohir.A01G046600 Gossypium hirsutum HOM05D005235 ORTHO05D006938 4.1e-199 698.4 504 73.2
Sed0026739 Sechium edule HOM05D005235 ORTHO05D006938 1.2e-198 696.8 496 74.2
Gorai.002G045400 Gossypium raimondii HOM05D005235 ORTHO05D006938 5.9e-198 694.5 504 72.6
COL.COLO4_17457 Corchorus olitorius HOM05D005235 ORTHO05D000503 1.0e-197 693.7 443 79.5
Sabra14G0105800 Salix brachista HOM05D005235 ORTHO05D006938 1.0e-197 693.7 513 71.5
Duzib213G0463 Durio zibethinus HOM05D005235 ORTHO05D006938 6.5e-197 691.0 497 73.2
CsaV3_4G004390 Cucumis sativus L. HOM05D005235 ORTHO05D006938 2.1e-195 686.0 452 78.3
Aqoxy1G00862 Aquilegia oxysepala HOM05D005235 ORTHO05D006938 2.7e-195 685.6 456 76.3
ClCG07G017190 Citrullus lanatus HOM05D005235 ORTHO05D006938 8.0e-195 684.1 501 73.7
MELO3C017627.2 Cucumis melo HOM05D005235 ORTHO05D006938 1.0e-194 683.7 498 72.5
TAR626G0946 Trochodendron aralioides HOM05D005235 ORTHO05D006938 1.8e-194 682.9 535 68.6
Haze_25416 Corylus avellana HOM05D005235 ORTHO05D006938 3.0e-194 682.2 495 71.7
Thecc.07G135900 Theobroma cacao HOM05D005235 ORTHO05D006938 4.0e-194 681.8 497 72.8
PSO566G0178 Papaver somniferum HOM05D005235 ORTHO05D006938 5.7e-193 677.9 496 69.4
Nn6g33287 Nelumbo nucifera HOM05D005235 ORTHO05D006938 9.8e-193 677.2 454 76.4
Cfa002235 Carpinus fangiana HOM05D005235 ORTHO05D006938 2.8e-192 675.6 489 72.0
PSO173G0108 Papaver somniferum HOM05D005235 ORTHO05D006938 4.9e-192 674.9 496 69.2
Ciclev10015023m.g Citrus clementina HOM05D005235 ORTHO05D006938 6.3e-192 674.5 462 74.2
Atru.BG.29.p Acer truncatum HOM05D005235 ORTHO05D006938 7.0e-191 671.0 442 77.1
Prupe.1G572900 Prunus persica HOM05D005235 ORTHO05D006938 7.0e-191 671.0 503 69.6
CANSAT21G0039 Cannabis sativa HOM05D005235 ORTHO05D006938 9.2e-191 670.6 520 69.4
MD15G1428200 Malus domestica HOM05D005235 ORTHO05D006938 9.2e-191 670.6 504 69.6
MD08G1236200 Malus domestica HOM05D005235 ORTHO05D006938 4.5e-190 668.3 504 69.6
FvH4_6g39550 Fragaria vesca HOM05D005235 ORTHO05D006938 1.7e-189 666.4 499 70.1
TWI32G1353 Tripterygium wilfordii HOM05D005235 ORTHO05D006938 1.7e-189 666.4 498 69.9
CiPaw.03G253600 Carya illinoinensis HOM05D005235 ORTHO05D006938 2.3e-189 666.0 503 70.2
RcHm_v2.0_Chr7g0221241 Rosa chinensis HOM05D005235 ORTHO05D006938 2.3e-189 666.0 498 69.9
EL10Ac7g16931 Beta vulgaris HOM05D005235 ORTHO05D006938 1.1e-188 663.7 494 69.0
Ah.08g210620 Amaranthus hybridus HOM05D005235 ORTHO05D006938 3.3e-188 662.1 449 73.5
QL10p019537 Quercus lobata HOM05D005235 ORTHO05D006938 9.5e-188 660.6 441 75.5
Cc03_g16140 Coffea canephora HOM05D005235 ORTHO05D006938 4.7e-187 658.3 448 74.6
Rhsim08G0037300 Rhododendron simsii HOM05D005235 ORTHO05D006938 4.7e-187 658.3 443 74.5
Dinv25083 Davidia involucrata HOM05D005235 ORTHO05D006938 8.0e-187 657.5 441 75.3
ECA233G3576 Erigeron canadensis HOM05D005235 ORTHO05D006938 8.0e-187 657.5 486 71.6
THA.LOC104820931 Tarenaya hassleriana HOM05D005235 ORTHO05D006938 1.8e-186 656.4 479 69.5
Oeu061455.1 Olea europaea HOM05D005235 ORTHO05D006938 2.3e-186 656.0 510 68.0
Sc01g0007490 Simmondsia chinensis HOM05D005235 ORTHO05D006938 5.2e-186 654.8 485 69.3
MBI04_g19169_MAGBIO Magnolia biondii HOM05D005235 ORTHO05D006938 1.2e-185 653.7 567 63.3
AL3G12040 Arabidopsis lyrata HOM05D005235 ORTHO05D006938 1.5e-185 653.3 475 70.5
CARHR076660 Cardamine hirsuta HOM05D005235 ORTHO05D006938 1.5e-185 653.3 495 68.7
vmacro22930 Vaccinium macrocarpon HOM05D005235 ORTHO05D006938 5.7e-185 651.4 479 70.1
BNapus_Darmor_BZH_scaffold_122p00160 Brassica napus HOM05D005235 ORTHO05D006938 9.8e-185 650.6 473 70.0
FvH4_5g28930 Fragaria vesca HOM05D005235 ORTHO05D006938 1.3e-184 650.2 504 68.1
AUR62033498 Chenopodium quinoa HOM05D005235 ORTHO05D006938 1.7e-184 649.8 448 72.1
FAN13G2026 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.7e-184 649.8 505 68.1
AT3G02660 Arabidopsis thaliana HOM05D005235 ORTHO05D006938 2.9e-184 649.0 518 66.6
A03p33070 Brassica napus HOM05D005235 ORTHO05D006938 2.9e-184 649.0 472 69.9
Hund00893 Selenicereus undatus HOM05D005235 ORTHO05D006938 3.7e-184 648.7 444 73.0
BNapus_Darmor_BZH_scaffold_99p00190 Brassica napus HOM05D005235 ORTHO05D006938 8.3e-184 647.5 473 69.8
SalBow4G1042 Salvia bowleyana HOM05D005235 ORTHO05D006938 8.3e-184 647.5 466 72.1
HanXRQChr08g0226751 Helianthus annuus HOM05D005235 ORTHO05D006938 1.1e-183 647.1 476 71.2
BraA01t04625Z Brassica rapa HOM05D005235 ORTHO05D006938 1.4e-183 646.7 473 69.8
BraA03t12477Z Brassica rapa HOM05D005235 ORTHO05D006938 1.4e-183 646.7 472 69.5
Lsat_1_v5_gn_6_15261 Lactuca sativa HOM05D005235 ORTHO05D006938 1.8e-183 646.4 492 69.1
Thhalv10020578m.g Eutrema salsugineum HOM05D005235 ORTHO05D006938 4.1e-183 645.2 513 66.9
Migut.N01688 Erythranthe guttata HOM05D005235 ORTHO05D006938 1.2e-182 643.7 465 71.2
AUR62028546 Chenopodium quinoa HOM05D005235 ORTHO05D006938 2.0e-182 642.9 448 71.2
Sp3g01700 Schrenkiella parvula HOM05D005235 ORTHO05D006938 2.0e-182 642.9 476 68.7
CSS0000006 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 3.5e-182 642.1 443 73.1
CSS0008907 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 3.5e-182 642.1 443 73.1
FAN18G1214 Fragaria x ananassa HOM05D005235 ORTHO05D006938 3.5e-182 642.1 499 67.7
Peaxi162Scf01038g00005 Petunia axillaris HOM05D005235 ORTHO05D006938 5.9e-182 641.3 456 71.5
BcaC01g04429 Brassica carinata HOM05D005235 ORTHO05D006938 3.0e-181 639.0 492 67.9
BolC1t05885H Brassica oleracea HOM05D005235 ORTHO05D006938 3.0e-181 639.0 473 68.9
BolC3t16290H Brassica oleracea HOM05D005235 ORTHO05D006938 3.0e-181 639.0 492 67.9
ATR0021G047 Amborella trichopoda HOM05D005235 ORTHO05D006938 8.6e-181 637.5 460 70.9
FAN08G3020 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.5e-180 636.0 505 67.7
Aa31LG5G13140 Aethionema arabicum HOM05D005235 ORTHO05D006938 3.3e-180 635.6 505 66.9
CAN.G192.3 Capsicum annuum HOM05D005235 ORTHO05D006938 5.6e-180 634.8 473 69.3
Migut.O00424 Erythranthe guttata HOM05D005235 ORTHO05D006938 5.6e-180 634.8 465 70.3
Nitab4.5_0000949g0050 Nicotiana tabacum HOM05D005235 ORTHO05D006938 2.1e-179 632.9 525 64.2
CDE05G2156 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 1.0e-178 630.6 441 71.7
Sopen07g004450 Solanum pennellii HOM05D005235 ORTHO05D006938 1.0e-178 630.6 453 70.9
CDE05G0570 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 2.3e-178 629.4 444 72.1
Nitab4.5_0000491g0060 Nicotiana tabacum HOM05D005235 ORTHO05D006938 2.3e-178 629.4 526 63.9
DCAR_005998 Daucus carota HOM05D005235 ORTHO05D006938 3.1e-178 629.0 495 66.3
Solyc07g008530.1 Solanum lycopersicum HOM05D005235 ORTHO05D006938 5.2e-178 628.2 453 70.6
Os01g0500900 Oryza sativa ssp. japonica HOM05D005235 ORTHO05D006938 1.5e-177 626.7 457 70.2
PGSC0003DMG400022992 Solanum tuberosum HOM05D005235 ORTHO05D006938 7.5e-177 624.4 496 66.7
SGA_v2.0_scaffold68G22803 Striga asiatica HOM05D005235 ORTHO05D006938 8.3e-176 620.9 486 66.7
Zm00001eb080850 Zea mays HOM05D005235 ORTHO05D006938 9.2e-175 617.5 480 66.0
Actinidia37705 Actinidia chinensis HOM05D005235 ORTHO05D006938 6.6e-173 611.3 514 65.8
unitig_22.g5329 Utricularia gibba HOM05D005235 ORTHO05D006938 1.5e-172 610.1 444 71.2
Lj8A333T11 Lonicera japonica HOM05D005235 ORTHO05D006938 9.8e-169 597.4 494 66.4
Mapoly0163s0012 Marchantia polymorpha HOM05D005235 ORTHO05D006938 1.7e-165 586.6 464 64.2
AagrBONN_evm.TU.Sc2ySwM_368.429 Anthoceros agrestis HOM05D005235 ORTHO05D006938 8.6e-165 584.3 443 66.1
Pp3c3_3070 Physcomitrium patens HOM05D005235 ORTHO05D006938 3.3e-164 582.4 444 66.9
Nitab4.5_0004867g0070 Nicotiana tabacum HOM05D000907 ORTHO05D000753 1.6e-163 580.1 457 67.2
SMO200G0177 Selaginella moellendorffii HOM05D005235 ORTHO05D006938 3.9e-157 558.9 444 62.8
BcaB04g19392 Brassica carinata HOM05D005235 ORTHO05D006938 3.1e-154 549.3 492 60.8
SEGI_38902 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 7.1e-151 538.1 381 72.4
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 1.1e-148 530.8 512 62.3
TAR633G2758 Trochodendron aralioides HOM05D005235 ORTHO05D006938 3.1e-146 522.7 343 77.6
MCO13G625 Micromonas commoda HOM05D005235 ORTHO05D006938 5.8e-145 518.5 472 55.7
GSVIVG01023528001 Vitis vinifera HOM05D005235 ORTHO05D006938 2.1e-142 510.0 500 59.2
arahy.Tifrunner.gnm1.ann1.8HX8KM Arachis hypogaea HOM05D005235 ORTHO05D006938 6.0e-142 508.4 438 65.8
Cre13.g606050 Chlamydomonas reinhardtii HOM05D005235 ORTHO05D006938 2.1e-139 500.0 443 58.2
FAN05G2159 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.1e-139 500.0 495 56.8
PRCOL_00003633 Prasinoderma coloniale HOM05D005235 ORTHO05D006938 1.3e-131 474.2 508 50.6
CBR_g10848 Chara braunii HOM05D005235 ORTHO05D006938 2.4e-130 469.9 482 51.9
Actinidia19541 Actinidia chinensis HOM05D005235 ORTHO05D006938 1.6e-110 404.1 466 53.9
FAN04G0607 Fragaria x ananassa HOM05D005235 ORTHO05D006938 7.9e-102 375.2 235 78.3
BolC1t05886H Brassica oleracea HOM05D005235 ORTHO05D006938 1.6e-81 307.8 410 45.6
Pp3s58_130 Physcomitrium patens HOM05D005235 ORTHO05D006938 1.6e-78 297.7 442 38.5
HPP92_015556 Vanilla planifolia HOM05D005235 ORTHO05D006938 1.6e-78 297.7 255 60.0
Dinv11903 Davidia involucrata HOM05D005235 ORTHO05D006938 2.0e-73 280.8 367 46.6
C03p40250 Brassica napus HOM05D005235 ORTHO05D006938 1.8e-69 267.7 248 58.9
BNapus_Darmor_BZH_scaffold_133p00140 Brassica napus HOM05D005235 ORTHO05D032674 1.4e-66 258.1 245 59.2
HPP92_015557 Vanilla planifolia HOM05D005235 ORTHO05D006938 1.8e-66 257.7 173 74.6
BcaC09g47648 Brassica carinata HOM05D005235 ORTHO05D032674 1.7e-64 251.1 347 47.0
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 4.7e-62 243.0 470 32.1
Haze_27256 Corylus avellana HOM05D005235 ORTHO05D006938 6.0e-57 226.1 313 38.7
Oeu046079.2 Olea europaea HOM05D002040 ORTHO05D002502 1.2e-49 201.8 401 36.7
FAN04G0381 Fragaria x ananassa HOM05D005235 ORTHO05D006938 3.5e-49 200.3 173 62.4
BraA01t04657Z Brassica rapa HOM05D005235 ORTHO05D032674 7.3e-39 166.0 134 65.7
CDE05G3313 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 9.6e-39 165.6 112 72.3
FAN09G2876 Fragaria x ananassa HOM05D005235 ORTHO05D006938 5.4e-34 149.8 96 76.0
SEGI_05348 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 1.3e-24 118.6 66 84.8
arahy.Tifrunner.gnm1.ann1.J19R9Y Arachis hypogaea HOM05D005235 ORTHO05D038945 1.3e-22 112.1 57 93.0
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 3.7e-22 110.5 78 69.2
SEGI_33043 Sequoiadendron giganteum HOM05D005235 ORTHO05D008256 1.7e-19 101.7 70 68.6
Thecc.07G136200 Theobroma cacao HOM05D005235 ORTHO05D006938 2.4e-18 97.8 129 49.6
TAR633G1966 Trochodendron aralioides HOM05D005235 ORTHO05D006938 2.4e-18 97.8 131 46.6
Nn1g04561 Nelumbo nucifera HOM05D005235 ORTHO05D038945 6.0e-17 93.2 85 60.0
Oeu038380.1 Olea europaea HOM05D007843 ORTHO05D003639 1.4e-13 82.0 64 62.5
BNapus_Darmor_BZH_scaffold_119p00120 Brassica napus HOM05D005235 ORTHO05D006938 1.0e-11 75.9 49 73.5
BNapus_Darmor_BZH_scaffold_97p00310 Brassica napus HOM05D005235 ORTHO05D006938 1.0e-11 75.9 49 73.5
BolC1t05887H Brassica oleracea HOM05D005235 ORTHO05D014124 2.9e-11 74.3 68 63.2


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