Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21158 Trifolium pratense HOM05D001734 ORTHO05D003483 5.4e-43 177.2 85 100.0
TPR.G6095 Trifolium pratense HOM05D001734 ORTHO05D003483 2.1e-31 138.7 73 90.4
Ca_16175_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 5.1e-25 117.5 73 76.7
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 5.1e-25 117.5 73 74.0
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 4.3e-24 114.4 73 75.3
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 2.8e-23 111.7 73 74.0
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 4.8e-23 110.9 73 71.2
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 1.1e-22 109.8 73 71.2
VMungo1309G1926 Vigna mungo HOM05D000002 ORTHO05D000001 1.4e-22 109.4 73 69.9
Lalb_Chr08g0236521 Lupinus albus HOM05D001734 ORTHO05D003483 2.4e-22 108.6 73 71.2
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 1.0e-20 103.2 73 64.4
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 4.9e-20 100.9 73 65.8
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 6.5e-20 100.5 81 58.0
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 1.1e-19 99.8 73 57.5
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 1.4e-19 99.4 73 63.0
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 1.4e-19 99.4 81 58.0
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 1.9e-19 99.0 73 61.6
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 1.9e-19 99.0 73 57.5
Lj9A448T39 Lonicera japonica HOM05D001734 ORTHO05D003483 1.9e-19 99.0 80 56.2
CSS0012833 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 3.2e-19 98.2 73 61.6
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 3.2e-19 98.2 73 61.6
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 3.2e-19 98.2 73 61.6
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 3.2e-19 98.2 73 56.2
Gohir.A09G171650 Gossypium hirsutum HOM05D001734 ORTHO05D003483 4.2e-19 97.8 73 60.3
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 4.2e-19 97.8 73 60.3
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 4.2e-19 97.8 73 60.3
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 4.2e-19 97.8 80 53.8
Rhsim08G0172200 Rhododendron simsii HOM05D001734 ORTHO05D003483 4.2e-19 97.8 73 61.6
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 5.5e-19 97.4 73 61.6
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 5.5e-19 97.4 73 63.0
TAR629G2960 Trochodendron aralioides HOM05D001734 ORTHO05D003483 5.5e-19 97.4 73 63.0
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 2.1e-18 95.5 73 56.2
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 2.7e-18 95.1 73 61.6
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 2.7e-18 95.1 73 58.9
Cpa.g.sc1166.1 Carica papaya HOM05D001734 ORTHO05D003483 3.5e-18 94.7 73 60.3
vmacro19389 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 3.5e-18 94.7 73 60.3
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 4.6e-18 94.4 73 60.3
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 7.9e-18 93.6 73 60.3
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 1.0e-17 93.2 73 61.6
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 5.1e-17 90.9 73 56.2
FAN05G0227 Fragaria x ananassa HOM05D001734 ORTHO05D003483 5.1e-17 90.9 73 56.2
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 5.1e-17 90.9 73 56.2
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 5.1e-17 90.9 73 56.2
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 5.1e-17 90.9 73 58.9
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 6.7e-17 90.5 73 57.5
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 8.7e-17 90.1 72 56.9
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 1.5e-16 89.4 73 54.8
Rhsim02G0151200 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.9e-16 89.0 73 56.2
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 1.9e-16 89.0 81 51.9
Cc04_g14140 Coffea canephora HOM05D001734 ORTHO05D003483 2.5e-16 88.6 81 50.6
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 2.5e-16 88.6 72 55.6
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 3.3e-16 88.2 80 52.5
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 4.3e-16 87.8 73 58.9
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 4.3e-16 87.8 81 48.1
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 4.3e-16 87.8 70 60.0
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 5.7e-16 87.4 72 54.2
Hund02745 Selenicereus undatus HOM05D001734 ORTHO05D003483 5.7e-16 87.4 73 53.4
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 7.4e-16 87.0 72 54.2
BraA06t25686Z Brassica rapa HOM05D001734 ORTHO05D003483 7.4e-16 87.0 72 54.2
CAN.G1305.20 Capsicum annuum HOM05D001734 ORTHO05D003483 7.4e-16 87.0 81 51.9
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 9.7e-16 86.7 73 52.1
Peaxi162Scf00009g00112 Petunia axillaris HOM05D001734 ORTHO05D003483 9.7e-16 86.7 73 54.8
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 1.3e-15 86.3 72 54.2
BcaNung06699 Brassica carinata HOM05D001734 ORTHO05D003483 1.3e-15 86.3 72 54.2
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 1.3e-15 86.3 72 54.2
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 1.3e-15 86.3 72 54.2
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 1.3e-15 86.3 72 55.6
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 1.6e-15 85.9 70 58.6
PSO732G0258 Papaver somniferum HOM05D001734 ORTHO05D003483 1.6e-15 85.9 70 58.6
Migut.C00312 Erythranthe guttata HOM05D001734 ORTHO05D003483 2.8e-15 85.1 81 48.1
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 3.7e-15 84.7 77 48.1
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 3.7e-15 84.7 73 52.1
Nitab4.5_0000984g0080 Nicotiana tabacum HOM05D001734 ORTHO05D003483 4.8e-15 84.3 73 54.8
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 8.2e-15 83.6 72 54.2
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 1.1e-14 83.2 72 51.4
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 1.8e-14 82.4 70 52.9
ATR0730G017 Amborella trichopoda HOM05D001734 ORTHO05D003483 2.4e-14 82.0 73 52.1
arahy.Tifrunner.gnm1.ann1.BK2P93 Arachis hypogaea HOM05D001734 ORTHO05D003483 3.1e-14 81.6 54 68.5
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 5.3e-14 80.9 72 52.8
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 1.5e-13 79.3 78 43.6
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 1.5e-13 79.3 84 41.7
SEGI_17988 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 5.9e-13 77.4 73 52.1
Rhsim06G0125200 Rhododendron simsii HOM05D001734 ORTHO05D003483 7.7e-13 77.0 73 52.1
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 1.3e-12 76.3 73 50.7
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 2.9e-12 75.1 77 45.5
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 8.5e-12 73.6 73 50.7
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 8.5e-12 73.6 73 46.6
arahy.Tifrunner.gnm1.ann1.1I6Y5K Arachis hypogaea HOM05D001734 ORTHO05D003483 1.1e-11 73.2 44 70.5
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 1.1e-11 73.2 84 42.9
SHI17017 Sapria himalayana HOM05D001734 ORTHO05D003483 1.1e-11 73.2 72 51.4
HPP92_004845 Vanilla planifolia HOM05D002152 ORTHO05D003483 9.4e-11 70.1 73 43.8
AagrBONN_evm.TU.Sc2ySwM_117.1596 Anthoceros agrestis HOM05D001734 ORTHO05D003483 1.5e-08 62.8 80 41.2
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 4.8e-07 57.8 79 39.2
CBR_g286 Chara braunii HOM05D000004 ORTHO05D000002 4.8e-07 57.8 74 43.2
Pp3c2_23700 Physcomitrium patens HOM05D001734 ORTHO05D003483 4.8e-07 57.8 74 43.2
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 8.2e-07 57.0 74 43.2
arahy.Tifrunner.gnm1.ann1.EMU6Q2 Arachis hypogaea HOM05D001734 ORTHO05D003483 1.4e-06 56.2 35 71.4


User provided reference genes

Program Settings