Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20301 Trifolium pratense HOM05D000070 ORTHO05D006627 6.4e-129 464.2 243 100.0
TPR.G9706 Trifolium pratense HOM05D000070 ORTHO05D006627 8.1e-92 340.9 328 60.7
Medtr4g083460 Medicago truncatula HOM05D000070 ORTHO05D006627 3.7e-84 315.5 328 57.0
Psat7g132840 Pisum sativum HOM05D000070 ORTHO05D006627 2.5e-80 302.8 329 55.6
Glyma.07G224000 Glycine max HOM05D000070 ORTHO05D006627 7.6e-74 281.2 330 53.0
Ca_18785_v3 Cicer arietinum L. HOM05D000070 ORTHO05D006627 2.5e-72 276.2 328 52.7
Lj4g0001942 Lotus japonicus HOM05D000070 ORTHO05D006627 3.9e-70 268.9 330 51.2
arahy.Tifrunner.gnm1.ann1.REAP7F Arachis hypogaea HOM05D000070 ORTHO05D006627 3.4e-66 255.8 328 48.2
arahy.Tifrunner.gnm1.ann1.UR3YMK Arachis hypogaea HOM05D000070 ORTHO05D006627 1.0e-65 254.2 326 48.2
Phvul.002G100600 Phaseolus vulgaris HOM05D000070 ORTHO05D006627 2.7e-63 246.1 331 48.3
TPR.G27666 Trifolium pratense HOM05D000070 ORTHO05D006627 2.7e-63 246.1 270 57.4
Lalb_Chr05g0219821 Lupinus albus HOM05D000070 ORTHO05D006627 6.1e-63 245.0 332 47.3
TPR.G29131 Trifolium pratense HOM05D000070 ORTHO05D006627 2.0e-42 176.8 93 94.6
TPR.G29502 Trifolium pratense HOM05D000070 ORTHO05D006627 8.0e-39 164.9 90 91.1
Duzib192G0613 Durio zibethinus HOM05D000070 ORTHO05D006627 3.8e-33 146.0 332 32.8
CiPaw.02G023600 Carya illinoinensis HOM05D000070 ORTHO05D006627 4.7e-31 139.0 335 32.8
Thecc.06G135300 Theobroma cacao HOM05D000070 ORTHO05D006627 8.8e-30 134.8 325 31.4
COL.COLO4_30925 Corchorus olitorius HOM05D000070 ORTHO05D006627 5.7e-29 132.1 330 30.9
Manes.11G051180 Manihot esculenta HOM05D000070 ORTHO05D006627 9.8e-29 131.3 329 30.4
Ciclev10014090m.g Citrus clementina HOM05D000070 ORTHO05D006627 2.2e-28 130.2 335 32.8
Gohir.D10G048401 Gossypium hirsutum HOM05D000070 ORTHO05D006627 4.8e-28 129.0 332 31.3
Cfa006373 Carpinus fangiana HOM05D000070 ORTHO05D006627 1.1e-27 127.9 337 32.0
TWI09G1172 Tripterygium wilfordii HOM05D000070 ORTHO05D006627 3.1e-27 126.3 328 29.0
Gorai.011G051500 Gossypium raimondii HOM05D000070 ORTHO05D006627 4.1e-27 125.9 332 31.0
Potri.001G174100 Populus trichocarpa HOM05D000070 ORTHO05D006627 3.5e-26 122.9 336 33.0
QL11p017850 Quercus lobata HOM05D000070 ORTHO05D006627 8.6e-25 118.2 299 31.4
MD05G1251500 Malus domestica HOM05D000070 ORTHO05D006627 1.1e-24 117.9 123 52.8
Prupe.4G112300 Prunus persica HOM05D000070 ORTHO05D006627 1.9e-24 117.1 125 52.0
Atru.chr10.621 Acer truncatum HOM05D000070 ORTHO05D006627 2.5e-24 116.7 330 29.4
Sabra01G0137800 Salix brachista HOM05D000070 ORTHO05D006627 4.7e-23 112.5 348 31.0
RcHm_v2.0_Chr5g0020121 Rosa chinensis HOM05D000070 ORTHO05D006627 6.1e-23 112.1 327 30.9
Cpa.g.sc138.31 Carica papaya HOM05D000070 ORTHO05D006627 8.0e-23 111.7 334 29.0
Rhsim01G0112400 Rhododendron simsii HOM05D000070 ORTHO05D006627 1.0e-22 111.3 122 54.9
Cc10_g13650 Coffea canephora HOM05D000070 ORTHO05D006627 2.3e-22 110.2 338 29.9
Dinv05864 Davidia involucrata HOM05D000070 ORTHO05D006627 2.3e-22 110.2 125 52.0
Haze_04406 Corylus avellana HOM05D000070 ORTHO05D006627 1.5e-21 107.5 337 30.9
GSVIVG01013614001 Vitis vinifera HOM05D000070 ORTHO05D006627 2.0e-21 107.1 123 50.4
FvH4_3g12310 Fragaria vesca HOM05D000070 ORTHO05D006627 1.3e-20 104.4 121 50.4
Actinidia01326 Actinidia chinensis HOM05D000070 ORTHO05D006627 2.8e-20 103.2 333 27.9
vmacro20772 Vaccinium macrocarpon HOM05D000070 ORTHO05D006627 2.8e-20 103.2 107 53.3
FAN26G0150 Fragaria x ananassa HOM05D000049 ORTHO05D006627 1.1e-19 101.3 310 31.3
Lj4A674T64 Lonicera japonica HOM05D000070 ORTHO05D006627 1.1e-19 101.3 122 47.5
TAR626G1726 Trochodendron aralioides HOM05D000070 ORTHO05D006627 1.1e-19 101.3 339 29.5
CANSAT35G0895 Cannabis sativa HOM05D000070 ORTHO05D006627 3.2e-19 99.8 115 51.3
Nn7g37939 Nelumbo nucifera HOM05D000070 ORTHO05D006627 1.0e-17 94.7 120 45.0
ECA247G0604 Erigeron canadensis HOM05D000070 ORTHO05D006627 1.3e-17 94.4 92 50.0
CARHR204530 Cardamine hirsuta HOM05D000070 ORTHO05D006627 1.7e-17 94.0 221 32.6
Sp6g34430 Schrenkiella parvula HOM05D000070 ORTHO05D006627 1.7e-17 94.0 119 42.0
Carub.0006s0739 Capsella rubella HOM05D000070 ORTHO05D006627 2.9e-17 93.2 114 42.1
AT5G08470 Arabidopsis thaliana HOM05D000070 ORTHO05D006627 3.9e-17 92.8 109 45.9
Aqoxy1G01537 Aquilegia oxysepala HOM05D000070 ORTHO05D006627 8.6e-17 91.7 336 25.6
HanXRQChr02g0040551 Helianthus annuus HOM05D000070 ORTHO05D006627 1.5e-16 90.9 108 45.4
C09p68530 Brassica napus HOM05D000070 ORTHO05D006627 1.9e-16 90.5 119 41.2
BolC9t59597H Brassica oleracea HOM05D000070 ORTHO05D006627 1.9e-16 90.5 119 41.2
A10p28270 Brassica napus HOM05D000070 ORTHO05D006627 2.5e-16 90.1 119 40.3
Thhalv10012497m.g Eutrema salsugineum HOM05D000070 ORTHO05D006627 4.3e-16 89.4 114 42.1
BraA10t44876Z Brassica rapa HOM05D000070 ORTHO05D006627 1.6e-15 87.4 119 40.3
Lsat_1_v5_gn_1_6720 Lactuca sativa HOM05D000070 ORTHO05D006627 1.6e-15 87.4 81 56.8
DCAR_014363 Daucus carota HOM05D000070 ORTHO05D006627 2.1e-15 87.0 110 48.2
Oeu040394.2 Olea europaea HOM05D000070 ORTHO05D006627 2.1e-15 87.0 113 47.8
SalBow7G2869 Salvia bowleyana HOM05D000070 ORTHO05D006627 6.1e-15 85.5 127 43.3
PGR102G0872 Punica granatum HOM05D000070 ORTHO05D006627 8.0e-15 85.1 115 45.2
Sopen04g025820 Solanum pennellii HOM05D000070 ORTHO05D006627 1.4e-14 84.3 129 41.9
Migut.C01080 Erythranthe guttata HOM05D000070 ORTHO05D006627 1.8e-14 84.0 122 41.8
CAN.G405.6 Capsicum annuum HOM05D000070 ORTHO05D006627 3.1e-14 83.2 113 43.4
Solyc04g057960.4 Solanum lycopersicum HOM05D000070 ORTHO05D006627 3.1e-14 83.2 129 41.9
FAN16G1763 Fragaria x ananassa HOM05D000070 ORTHO05D006627 6.8e-14 82.0 122 45.1
MBI01_g11418_MAGBIO Magnolia biondii HOM05D000070 ORTHO05D006627 8.9e-14 81.6 124 41.1
MELO3C021783.2 Cucumis melo HOM05D000070 ORTHO05D006627 1.5e-13 80.9 109 44.0
SGA_v2.0_scaffold52G18907 Striga asiatica HOM05D000070 ORTHO05D006627 1.5e-13 80.9 115 40.0
PSO675G1403 Papaver somniferum HOM05D000070 ORTHO05D006627 2.6e-13 80.1 148 37.8
BcaB08g37256 Brassica carinata HOM05D000070 ORTHO05D006627 3.4e-13 79.7 109 39.4
Peaxi162Scf00066g00526 Petunia axillaris HOM05D000070 ORTHO05D006627 4.4e-13 79.3 124 41.1
FAN21G2030 Fragaria x ananassa HOM05D000070 ORTHO05D006627 9.8e-13 78.2 130 41.5
CsaV3_1G046740 Cucumis sativus L. HOM05D000070 ORTHO05D006627 1.3e-12 77.8 110 42.7
Sed0014200 Sechium edule HOM05D000070 ORTHO05D006627 2.2e-12 77.0 110 44.5
Ah.15g098730 Amaranthus hybridus HOM05D000070 ORTHO05D006627 8.3e-12 75.1 185 33.5
Aa31LG3G18070 Aethionema arabicum HOM05D000065 ORTHO05D006627 2.4e-11 73.6 118 39.8
Nitab4.5_0000317g0130 Nicotiana tabacum HOM05D000070 ORTHO05D006627 3.2e-11 73.2 119 40.3
Zm00001eb176300 Zea mays HOM05D000070 ORTHO05D006627 3.2e-11 73.2 294 25.2
Eucgr.E02009 Eucalyptus grandis HOM05D000070 ORTHO05D006627 4.1e-11 72.8 118 41.5
PSO541G5972 Papaver somniferum HOM05D000070 ORTHO05D006627 7.0e-11 72.0 148 35.1
SHI32171 Sapria himalayana HOM05D000070 ORTHO05D006627 7.0e-11 72.0 149 35.6
Nitab4.5_0003485g0060 Nicotiana tabacum HOM05D000070 ORTHO05D006627 1.2e-10 71.2 125 40.0
Sc07g0007670 Simmondsia chinensis HOM05D000070 ORTHO05D006627 6.0e-10 68.9 115 39.1
EL10Ac2g02462 Beta vulgaris HOM05D000070 ORTHO05D006627 1.0e-09 68.2 134 34.3
ClCG01G008970 Citrullus lanatus HOM05D000070 ORTHO05D006627 1.0e-09 68.2 109 41.3
CDE02G2199 Ceratophyllum demersum HOM05D000070 ORTHO05D006627 5.0e-09 65.9 108 39.8
AUR62024782 Chenopodium quinoa HOM05D000070 ORTHO05D006627 1.1e-08 64.7 81 38.3
ATR0763G153 Amborella trichopoda HOM05D000070 ORTHO05D006627 3.3e-08 63.2 109 42.2
AUR62032439 Chenopodium quinoa HOM05D000070 ORTHO05D006627 3.3e-08 63.2 107 33.6
TPR.G22941 Trifolium pratense HOM05D000002 ORTHO05D000001 6.8e-06 55.5 25 96.0


User provided reference genes

Program Settings