Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3127 Trochodendron aralioides HOM05D004270 ORTHO05D005037 1.5e-164 582.8 291 100.0
Nn6g34391 Nelumbo nucifera HOM05D004270 ORTHO05D005037 3.3e-156 555.1 288 94.1
Actinidia07391 Actinidia chinensis HOM05D004270 ORTHO05D005037 3.4e-153 545.0 291 90.7
Psat3g099560 Pisum sativum HOM05D004270 ORTHO05D005037 5.8e-153 544.3 291 89.7
Hma1.2p1_0151F.1_g067120 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 1.7e-152 542.7 291 90.0
CiPaw.14G018200 Carya illinoinensis HOM05D004270 ORTHO05D005037 8.4e-152 540.4 291 90.4
GSVIVG01036737001 Vitis vinifera HOM05D004270 ORTHO05D005037 8.4e-152 540.4 291 90.7
VMungo1383G2841 Vigna mungo HOM05D004270 ORTHO05D005037 1.1e-151 540.0 291 90.7
Lj1g0019682 Lotus japonicus HOM05D004270 ORTHO05D005037 1.4e-151 539.7 291 90.0
Medtr7g081220 Medicago truncatula HOM05D004270 ORTHO05D005037 1.9e-151 539.3 291 89.0
Potri.002G061900 Populus trichocarpa HOM05D004270 ORTHO05D005037 1.9e-151 539.3 291 90.0
CSS0035574 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 2.4e-151 538.9 291 89.3
Potri.005G199100 Populus trichocarpa HOM05D004270 ORTHO05D005037 4.2e-151 538.1 291 89.7
CAN.G84.19 Capsicum annuum HOM05D004270 ORTHO05D005037 1.2e-150 536.6 291 89.3
TPR.G21772 Trifolium pratense HOM05D004270 ORTHO05D005037 1.6e-150 536.2 291 89.3
Ca_08047_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 6.0e-150 534.3 291 88.3
Ca_08053_v3 Cicer arietinum L. HOM05D004270 ORTHO05D005037 6.0e-150 534.3 291 88.3
Ciclev10005458m.g Citrus clementina HOM05D004270 ORTHO05D005037 6.0e-150 534.3 291 89.7
DCAR_016846 Daucus carota HOM05D004270 ORTHO05D005037 6.0e-150 534.3 291 88.3
Thecc.06G006500 Theobroma cacao HOM05D004270 ORTHO05D005037 6.0e-150 534.3 291 87.6
arahy.Tifrunner.gnm1.ann1.D5XWDC Arachis hypogaea HOM05D004270 ORTHO05D005037 7.8e-150 533.9 291 88.7
MD10G1213400 Malus domestica HOM05D004270 ORTHO05D005037 7.8e-150 533.9 291 88.0
Migut.H01658 Erythranthe guttata HOM05D004270 ORTHO05D005037 1.3e-149 533.1 288 89.9
Phvul.008G049000 Phaseolus vulgaris HOM05D004270 ORTHO05D005037 1.3e-149 533.1 288 90.6
Sc15g0006060 Simmondsia chinensis HOM05D004270 ORTHO05D005037 1.3e-149 533.1 291 87.6
arahy.Tifrunner.gnm1.ann1.PIH8R2 Arachis hypogaea HOM05D004270 ORTHO05D005037 3.0e-149 531.9 291 88.3
vmacro23274 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 3.0e-149 531.9 319 83.4
AT1G79500 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 5.1e-149 531.2 291 87.3
Manes.03G080050 Manihot esculenta HOM05D004270 ORTHO05D005037 5.1e-149 531.2 291 89.0
PGSC0003DMG400025362 Solanum tuberosum HOM05D004270 ORTHO05D005037 5.1e-149 531.2 291 88.3
CANSAT78G1193 Cannabis sativa HOM05D004270 ORTHO05D005037 8.7e-149 530.4 289 86.9
Thhalv10008359m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 8.7e-149 530.4 290 87.2
Aqoxy7G03543 Aquilegia oxysepala HOM05D004270 ORTHO05D005037 1.1e-148 530.0 288 87.5
Atru.chr1.67 Acer truncatum HOM05D004270 ORTHO05D005037 1.5e-148 529.6 291 88.0
Solyc11g072690.2 Solanum lycopersicum HOM05D004270 ORTHO05D005037 1.9e-148 529.3 291 88.0
Sopen11g030360 Solanum pennellii HOM05D004270 ORTHO05D005037 1.9e-148 529.3 291 88.0
TPR.G29107 Trifolium pratense HOM05D004270 ORTHO05D005037 1.9e-148 529.3 291 89.0
CARHR016810 Cardamine hirsuta HOM05D004270 ORTHO05D005037 2.5e-148 528.9 289 87.2
Sabra05G0151600 Salix brachista HOM05D004270 ORTHO05D005037 3.3e-148 528.5 312 83.7
Prupe.4G129800 Prunus persica HOM05D004270 ORTHO05D005037 4.3e-148 528.1 291 87.6
HanXRQChr14g0449761 Helianthus annuus HOM05D004270 ORTHO05D005037 5.6e-148 527.7 291 86.9
SGA_v2.0_scaffold49G18204 Striga asiatica HOM05D004270 ORTHO05D005037 5.6e-148 527.7 296 87.5
AL2G40110 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 7.3e-148 527.3 291 86.6
Glyma.09G244900 Glycine max HOM05D004270 ORTHO05D005037 9.6e-148 526.9 289 88.6
MSTRG.13089 Avicennia marina HOM05D004270 ORTHO05D005037 1.6e-147 526.2 291 86.9
CARHR073160 Cardamine hirsuta HOM05D004270 ORTHO05D005037 1.6e-147 526.2 291 87.3
Duzib187G1348 Durio zibethinus HOM05D004270 ORTHO05D005037 1.6e-147 526.2 291 87.6
Sed0021681 Sechium edule HOM05D004270 ORTHO05D005037 1.6e-147 526.2 288 88.2
PSO675G6017 Papaver somniferum HOM05D004270 ORTHO05D005037 2.1e-147 525.8 290 88.3
Sp5g34553 Schrenkiella parvula HOM05D004270 ORTHO05D005037 2.1e-147 525.8 291 86.3
Thhalv10018956m.g Eutrema salsugineum HOM05D004270 ORTHO05D005037 2.8e-147 525.4 291 86.3
BcaB02g07218 Brassica carinata HOM05D004270 ORTHO05D005037 3.6e-147 525.0 291 86.6
RcHm_v2.0_Chr5g0023881 Rosa chinensis HOM05D004270 ORTHO05D005037 3.6e-147 525.0 291 87.3
THA.LOC104812380 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 3.6e-147 525.0 287 87.1
ECA238G3087 Erigeron canadensis HOM05D004270 ORTHO05D005037 4.7e-147 524.6 292 86.3
Carub.0002s2636 Capsella rubella HOM05D004270 ORTHO05D005037 6.2e-147 524.2 291 86.3
Duzib268G0296 Durio zibethinus HOM05D004270 ORTHO05D005037 6.2e-147 524.2 291 86.3
AUR62009294 Chenopodium quinoa HOM05D004270 ORTHO05D005037 1.1e-146 523.5 291 85.2
ClCG03G001640 Citrullus lanatus HOM05D004270 ORTHO05D005037 1.1e-146 523.5 288 87.5
PSO782G4107 Papaver somniferum HOM05D004270 ORTHO05D005037 1.1e-146 523.5 290 86.9
Os12g0210800 Oryza sativa ssp. japonica HOM05D004270 ORTHO05D005037 1.4e-146 523.1 289 86.2
BcaC03g15900 Brassica carinata HOM05D004270 ORTHO05D005037 1.8e-146 522.7 291 85.9
FvH4_3g14500 Fragaria vesca HOM05D004270 ORTHO05D005037 1.8e-146 522.7 291 86.9
EL10Ac2g04029 Beta vulgaris HOM05D004270 ORTHO05D005037 2.4e-146 522.3 291 85.2
CsaV3_1G034040 Cucumis sativus L. HOM05D004270 ORTHO05D005037 2.4e-146 522.3 288 87.5
MSTRG.16093 Avicennia marina HOM05D004270 ORTHO05D005037 4.0e-146 521.5 288 86.8
AUR62041708 Chenopodium quinoa HOM05D004270 ORTHO05D005037 5.2e-146 521.2 291 84.9
AUR62043393 Chenopodium quinoa HOM05D004270 ORTHO05D005037 5.2e-146 521.2 291 84.9
MELO3C020651.2 Cucumis melo HOM05D004270 ORTHO05D005037 5.2e-146 521.2 288 87.5
Lsat_1_v5_gn_2_88340 Lactuca sativa HOM05D004270 ORTHO05D005037 6.9e-146 520.8 291 85.6
PSO732G0600 Papaver somniferum HOM05D004270 ORTHO05D005037 6.9e-146 520.8 290 86.9
FAN25G1815 Fragaria x ananassa HOM05D004270 ORTHO05D005037 1.2e-145 520.0 291 86.6
HPP92_024995 Vanilla planifolia HOM05D004270 ORTHO05D005037 1.2e-145 520.0 291 84.5
arahy.Tifrunner.gnm1.ann1.WIVF2E Arachis hypogaea HOM05D004270 ORTHO05D005037 1.5e-145 519.6 298 84.6
TWI12G0564 Tripterygium wilfordii HOM05D004270 ORTHO05D005037 1.5e-145 519.6 291 87.3
Cc11_g02350 Coffea canephora HOM05D004270 ORTHO05D005037 2.6e-145 518.8 291 85.9
Gorai.004G095400 Gossypium raimondii HOM05D004270 ORTHO05D005037 3.4e-145 518.5 288 86.1
PGR119G1968 Punica granatum HOM05D004270 ORTHO05D005037 3.4e-145 518.5 287 86.4
Gohir.D08G090400 Gossypium hirsutum HOM05D004270 ORTHO05D005037 9.9e-145 516.9 288 85.8
MBI07_g44658_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 9.9e-145 516.9 290 88.3
AT1G16340 Arabidopsis thaliana HOM05D004270 ORTHO05D005037 2.2e-144 515.8 290 84.8
BraA02t07287Z Brassica rapa HOM05D004270 ORTHO05D005037 3.8e-144 515.0 292 85.6
Ah.15g099350 Amaranthus hybridus HOM05D004270 ORTHO05D005037 4.9e-144 514.6 288 84.0
Ah.15g099360 Amaranthus hybridus HOM05D004270 ORTHO05D005037 4.9e-144 514.6 288 84.0
AL1G28460 Arabidopsis lyrata HOM05D004270 ORTHO05D005037 1.9e-143 512.7 290 83.8
A02p22860 Brassica napus HOM05D004270 ORTHO05D005037 1.9e-143 512.7 295 84.7
Gohir.A08G080300 Gossypium hirsutum HOM05D004270 ORTHO05D005037 3.2e-143 511.9 288 85.1
SGA_v2.0_scaffold239G44014 Striga asiatica HOM05D004270 ORTHO05D005037 5.4e-143 511.1 276 88.8
Carub.0001s1608 Capsella rubella HOM05D004270 ORTHO05D005037 7.1e-143 510.8 290 85.5
vmacro11688 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 7.1e-143 510.8 363 73.3
C02p36680 Brassica napus HOM05D004270 ORTHO05D005037 2.1e-142 509.2 292 84.2
COL.COLO4_12345 Corchorus olitorius HOM05D004270 ORTHO05D005037 2.1e-142 509.2 289 85.5
MD05G1236400 Malus domestica HOM05D004270 ORTHO05D005037 2.7e-142 508.8 291 84.9
BolC6t38147H Brassica oleracea HOM05D004270 ORTHO05D005037 4.6e-142 508.1 291 85.2
THA.LOC104813606 Tarenaya hassleriana HOM05D004270 ORTHO05D005037 4.6e-142 508.1 287 85.0
BraA07t30356Z Brassica rapa HOM05D004270 ORTHO05D005037 1.0e-141 506.9 291 84.9
A07p27110 Brassica napus HOM05D004270 ORTHO05D005037 1.3e-141 506.5 291 84.5
Haze_02880 Corylus avellana HOM05D004270 ORTHO05D005037 1.3e-141 506.5 280 88.2
BolC2t09663H Brassica oleracea HOM05D004270 ORTHO05D005037 7.3e-140 500.7 296 83.1
Lalb_Chr19g0126381 Lupinus albus HOM05D004270 ORTHO05D005037 2.8e-139 498.8 279 87.8
Rhsim03G0145800 Rhododendron simsii HOM05D004270 ORTHO05D005037 3.6e-139 498.4 312 81.1
BcaC08g45353 Brassica carinata HOM05D004270 ORTHO05D005037 1.1e-138 496.9 274 87.2
QL04p092971 Quercus lobata HOM05D004270 ORTHO05D005037 1.1e-138 496.9 272 89.0
Lj7A89G46 Lonicera japonica HOM05D004270 ORTHO05D005037 1.4e-138 496.5 280 87.1
Glyma.18G248300 Glycine max HOM05D004270 ORTHO05D005037 2.4e-138 495.7 270 89.3
QL04p091607 Quercus lobata HOM05D004270 ORTHO05D005037 9.0e-138 493.8 272 88.6
Zm00001eb138330 Zea mays HOM05D004270 ORTHO05D005037 9.0e-138 493.8 285 83.2
Rhsim06G0243500 Rhododendron simsii HOM05D004270 ORTHO05D005037 1.5e-137 493.0 300 82.3
unitig_744.g24505 Utricularia gibba HOM05D004270 ORTHO05D005037 2.6e-137 492.3 270 86.7
FAN16G1654 Fragaria x ananassa HOM05D004270 ORTHO05D005037 4.5e-137 491.5 272 87.5
FAN11G3302 Fragaria x ananassa HOM05D004270 ORTHO05D005037 1.3e-136 490.0 288 83.3
PGR119G0090 Punica granatum HOM05D004270 ORTHO05D005037 3.8e-136 488.4 287 82.9
Ah.15g099340 Amaranthus hybridus HOM05D004270 ORTHO05D005037 1.9e-135 486.1 273 83.5
BcaB05g25203 Brassica carinata HOM05D004270 ORTHO05D005037 1.9e-135 486.1 293 82.6
CSS0009623 Camellia sinensis var. sinensis HOM05D004270 ORTHO05D005037 5.4e-135 484.6 259 89.6
SalBow8G2534 Salvia bowleyana HOM05D004270 ORTHO05D005037 9.3e-135 483.8 296 81.8
SalBow8G3927 Salvia bowleyana HOM05D004270 ORTHO05D005037 9.3e-135 483.8 296 81.8
Lj7A89G45 Lonicera japonica HOM05D004270 ORTHO05D005037 6.0e-134 481.1 274 86.5
C06p29850 Brassica napus HOM05D004270 ORTHO05D005037 5.1e-133 478.0 272 86.0
ATR0743G256 Amborella trichopoda HOM05D004270 ORTHO05D005037 1.5e-132 476.5 253 89.7
Aa31LG4G1520 Aethionema arabicum HOM05D004270 ORTHO05D005037 1.9e-132 476.1 272 85.3
ATR0561G061 Amborella trichopoda HOM05D004270 ORTHO05D005037 2.5e-132 475.7 253 90.1
Nitab4.5_0004015g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 2.5e-132 475.7 291 81.1
BcaC08g45351 Brassica carinata HOM05D004270 ORTHO05D005037 3.3e-132 475.3 284 81.7
Peaxi162Scf00616g00418 Petunia axillaris HOM05D004270 ORTHO05D005037 1.5e-129 466.5 291 79.7
Duzib187G1262 Durio zibethinus HOM05D004270 ORTHO05D005037 2.0e-129 466.1 258 88.0
Hma1.2p1_2351F.1_g320490 Hydrangea macrophylla HOM05D004270 ORTHO05D005037 2.0e-129 466.1 315 76.2
SMO347G0325 Selaginella moellendorffii HOM05D004270 ORTHO05D005037 4.5e-129 464.9 271 80.1
Pp3c22_7420 Physcomitrium patens HOM05D004270 ORTHO05D005037 1.9e-127 459.5 280 77.9
AagrBONN_evm.TU.Sc2ySwM_344.2891 Anthoceros agrestis HOM05D004270 ORTHO05D005037 1.3e-125 453.4 284 73.9
Oeu026000.2 Olea europaea HOM05D004270 ORTHO05D005037 1.1e-124 450.3 324 70.4
Eucgr.K01360 Eucalyptus grandis HOM05D004270 ORTHO05D005037 7.4e-124 447.6 247 87.9
DCAR_013716 Daucus carota HOM05D004270 ORTHO05D005037 9.6e-124 447.2 238 89.9
Lj4A247G30 Lonicera japonica HOM05D004270 ORTHO05D005037 4.8e-123 444.9 242 89.3
FAN21G0266 Fragaria x ananassa HOM05D004270 ORTHO05D005037 3.1e-122 442.2 254 85.0
PSO832G2042 Papaver somniferum HOM05D004270 ORTHO05D005037 3.8e-120 435.3 290 76.2
vmacro08704 Vaccinium macrocarpon HOM05D004270 ORTHO05D005037 7.4e-116 421.0 394 60.7
Mapoly0024s0056 Marchantia polymorpha HOM05D004270 ORTHO05D005037 2.9e-112 409.1 287 68.3
CiPaw.13G024200 Carya illinoinensis HOM05D004270 ORTHO05D005037 7.9e-110 401.0 220 89.5
RcHm_v2.0_Chr6g0274781 Rosa chinensis HOM05D004270 ORTHO05D005037 1.4e-109 400.2 275 74.9
CDE05G0560 Ceratophyllum demersum HOM05D004270 ORTHO05D005037 6.3e-99 364.8 190 91.1
QL04p093439 Quercus lobata HOM05D004270 ORTHO05D005037 1.2e-97 360.5 400 53.0
Nitab4.5_0006659g0030 Nicotiana tabacum HOM05D004270 ORTHO05D005037 5.9e-97 358.2 198 86.4
arahy.Tifrunner.gnm1.ann1.S8QNVY Arachis hypogaea HOM05D004270 ORTHO05D005037 1.7e-96 356.7 275 68.0
Cpa.g.sc32.74 Carica papaya HOM05D004270 ORTHO05D005037 1.4e-90 337.0 173 90.8
arahy.Tifrunner.gnm1.ann1.IC77ZE Arachis hypogaea HOM05D004270 ORTHO05D005037 2.2e-88 329.7 271 65.7
SHI21470 Sapria himalayana HOM05D004270 ORTHO05D005037 4.0e-85 318.9 278 61.5
Cfa020378 Carpinus fangiana HOM05D004270 ORTHO05D005037 6.1e-78 295.0 254 63.4
CBR_g41577 Chara braunii HOM05D000019 ORTHO05D000048 8.8e-77 291.2 172 79.1
arahy.Tifrunner.gnm1.ann1.06J840 Arachis hypogaea HOM05D004270 ORTHO05D005037 4.0e-69 265.8 194 71.1
Haze_26612 Corylus avellana HOM05D004270 ORTHO05D005037 8.9e-69 264.6 261 49.4
arahy.Tifrunner.gnm1.ann1.IZH1PK Arachis hypogaea HOM05D004270 ORTHO05D005037 2.9e-51 206.5 193 60.6
arahy.Tifrunner.gnm1.ann1.BQF4LJ Arachis hypogaea HOM05D004270 ORTHO05D005037 1.6e-49 200.7 133 76.7
arahy.Tifrunner.gnm1.ann1.C4QR2M Arachis hypogaea HOM05D004270 ORTHO05D005037 1.6e-49 200.7 133 76.7
QL04p092150 Quercus lobata HOM05D004270 ORTHO05D005037 2.6e-36 156.8 142 59.9
MBI10_g05703_MAGBIO Magnolia biondii HOM05D004270 ORTHO05D005037 2.3e-32 143.7 124 66.1
SEGI_39104 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 3.5e-25 119.8 91 63.7
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 5.1e-24 115.9 66 80.3
Lsat_1_v5_gn_3_92901 Lactuca sativa HOM05D004270 ORTHO05D005037 4.3e-23 112.8 72 69.4
arahy.Tifrunner.gnm1.ann1.J4JBIL Arachis hypogaea HOM05D004270 ORTHO05D005037 2.4e-21 107.1 88 62.5
arahy.Tifrunner.gnm1.ann1.SB2A23 Arachis hypogaea HOM05D004270 ORTHO05D005037 2.4e-21 107.1 88 62.5
Lsat_1_v5_gn_2_10621 Lactuca sativa HOM05D004270 ORTHO05D005037 1.3e-19 101.3 64 76.6
SEGI_07848 Sequoiadendron giganteum HOM05D004270 ORTHO05D005037 2.3e-16 90.5 51 78.4
arahy.Tifrunner.gnm1.ann1.8HXD5I Arachis hypogaea HOM05D004270 ORTHO05D005037 8.1e-14 82.0 46 82.6
RcHm_v2.0_Chr2g0110821 Rosa chinensis HOM05D004270 ORTHO05D005037 7.6e-12 75.5 45 80.0
FAN12G0414 Fragaria x ananassa HOM05D000835 ORTHO05D035555 2.9e-11 73.6 90 52.2
FAN12G0605 Fragaria x ananassa HOM05D000835 ORTHO05D035555 2.9e-11 73.6 90 52.2
TAR636G1752 Trochodendron aralioides HOM05D004270 ORTHO05D005037 3.5e-09 66.6 39 87.2
arahy.Tifrunner.gnm1.ann1.FF7QMU Arachis hypogaea HOM05D004270 ORTHO05D005037 2.3e-08 63.9 45 64.4
Dinv19578 Davidia involucrata HOM05D006464 ORTHO05D007923 1.3e-06 58.2 41 73.2


User provided reference genes

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