Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2201 Trochodendron aralioides HOM05D003576 ORTHO05D004124 4.3e-59 231.1 114 100.0
TAR633G2490 Trochodendron aralioides HOM05D003576 ORTHO05D004124 1.9e-43 179.1 120 77.5
Nn2g13102 Nelumbo nucifera HOM05D003576 ORTHO05D004124 8.1e-42 173.7 120 73.3
Peaxi162Scf01175g00019 Petunia axillaris HOM05D003576 ORTHO05D004124 2.3e-41 172.2 105 78.1
ATR0048G008 Amborella trichopoda HOM05D003576 ORTHO05D004124 6.8e-41 170.6 120 73.3
COL.COLO4_23659 Corchorus olitorius HOM05D003576 ORTHO05D004124 8.9e-41 170.2 105 76.2
Aqoxy1G02388 Aquilegia oxysepala HOM05D003576 ORTHO05D004124 2.0e-40 169.1 118 75.4
CDE04G0074 Ceratophyllum demersum HOM05D003576 ORTHO05D004124 2.0e-40 169.1 120 71.7
PGR142G1591 Punica granatum HOM05D003576 ORTHO05D004124 5.8e-40 167.5 120 70.8
PSO339G5183 Papaver somniferum HOM05D003576 ORTHO05D004124 9.8e-40 166.8 118 73.7
PSO063G6153 Papaver somniferum HOM05D003576 ORTHO05D004124 6.4e-39 164.1 118 72.9
CSS0018972 Camellia sinensis var. sinensis HOM05D003576 ORTHO05D004124 8.3e-39 163.7 120 69.2
CSS0040774 Camellia sinensis var. sinensis HOM05D003576 ORTHO05D004124 8.3e-39 163.7 120 69.2
Hma1.2p1_0382F.1_g140100 Hydrangea macrophylla HOM05D003576 ORTHO05D004124 8.3e-39 163.7 120 70.0
vmacro07071 Vaccinium macrocarpon HOM05D003576 ORTHO05D004124 8.3e-39 163.7 120 69.2
Dinv31323 Davidia involucrata HOM05D003576 ORTHO05D004124 1.1e-38 163.3 120 69.2
Actinidia06773 Actinidia chinensis HOM05D003576 ORTHO05D004124 1.9e-38 162.5 120 68.3
Rhsim03G0120500 Rhododendron simsii HOM05D003576 ORTHO05D004124 1.9e-38 162.5 120 68.3
CiPaw.02G173900 Carya illinoinensis HOM05D003576 ORTHO05D004124 2.4e-38 162.2 120 68.3
Gohir.A10G205700 Gossypium hirsutum HOM05D003576 ORTHO05D004124 3.2e-38 161.8 120 67.5
Gorai.011G239400 Gossypium raimondii HOM05D003576 ORTHO05D004124 3.2e-38 161.8 120 67.5
CAN.G694.86 Capsicum annuum HOM05D003576 ORTHO05D004124 9.2e-38 160.2 120 67.5
CiPaw.01G272700 Carya illinoinensis HOM05D003576 ORTHO05D004124 9.2e-38 160.2 120 67.5
AUR62018250 Chenopodium quinoa HOM05D003576 ORTHO05D004124 9.2e-38 160.2 120 66.7
AUR62037754 Chenopodium quinoa HOM05D003576 ORTHO05D004124 9.2e-38 160.2 120 66.7
FvH4_2g18840 Fragaria vesca HOM05D003576 ORTHO05D004124 9.2e-38 160.2 120 67.5
Gohir.D10G214000 Gossypium hirsutum HOM05D003576 ORTHO05D004124 9.2e-38 160.2 120 66.7
Nitab4.5_0000476g0030 Nicotiana tabacum HOM05D003576 ORTHO05D004124 9.2e-38 160.2 120 67.5
Nitab4.5_0009985g0010 Nicotiana tabacum HOM05D003576 ORTHO05D004124 9.2e-38 160.2 120 67.5
Prupe.2G213500 Prunus persica HOM05D003576 ORTHO05D004124 9.2e-38 160.2 120 67.5
RcHm_v2.0_Chr6g0284661 Rosa chinensis HOM05D003576 ORTHO05D004124 9.2e-38 160.2 120 67.5
Eucgr.J01085 Eucalyptus grandis HOM05D003576 ORTHO05D004124 1.2e-37 159.8 120 68.3
QL08p055786 Quercus lobata HOM05D003576 ORTHO05D004124 1.2e-37 159.8 120 66.7
HPP92_020748 Vanilla planifolia HOM05D003576 ORTHO05D004124 1.2e-37 159.8 118 68.6
Actinidia38283 Actinidia chinensis HOM05D003576 ORTHO05D004124 1.6e-37 159.5 122 68.0
Thecc.10G074000 Theobroma cacao HOM05D003576 ORTHO05D004124 1.6e-37 159.5 120 67.5
CANSAT56G0320 Cannabis sativa HOM05D003576 ORTHO05D004124 2.1e-37 159.1 120 66.7
Cc02_g11340 Coffea canephora HOM05D003576 ORTHO05D004124 2.1e-37 159.1 119 68.1
Sc20g0001840 Simmondsia chinensis HOM05D003576 ORTHO05D004124 2.1e-37 159.1 120 65.8
EL10Ac2g03301 Beta vulgaris HOM05D003576 ORTHO05D004124 2.7e-37 158.7 120 65.8
MD07G1174600 Malus domestica HOM05D003576 ORTHO05D004124 2.7e-37 158.7 120 66.7
Ah.10g032640 Amaranthus hybridus HOM05D003576 ORTHO05D004124 3.5e-37 158.3 121 64.5
Lj3A882G53 Lonicera japonica HOM05D003576 ORTHO05D004124 3.5e-37 158.3 117 68.4
Lalb_Chr03g0035911 Lupinus albus HOM05D003576 ORTHO05D004124 3.5e-37 158.3 116 70.7
Cfa021515 Carpinus fangiana HOM05D003576 ORTHO05D004124 4.6e-37 157.9 121 67.8
Lalb_Chr01g0010001 Lupinus albus HOM05D003576 ORTHO05D004124 7.8e-37 157.1 120 67.5
SalBow3G2401 Salvia bowleyana HOM05D003576 ORTHO05D004124 1.0e-36 156.8 117 67.5
DCAR_019104 Daucus carota HOM05D003576 ORTHO05D004124 1.3e-36 156.4 121 67.8
ClCG08G007510 Citrullus lanatus HOM05D003576 ORTHO05D004124 1.7e-36 156.0 121 66.1
Dinv36441 Davidia involucrata HOM05D003576 ORTHO05D004124 1.7e-36 156.0 120 66.7
Lj2g0011631 Lotus japonicus HOM05D003576 ORTHO05D004124 1.7e-36 156.0 120 66.7
MD01G1108400 Malus domestica HOM05D003576 ORTHO05D004124 1.7e-36 156.0 120 66.7
GSVIVG01016273001 Vitis vinifera HOM05D003576 ORTHO05D004124 1.7e-36 156.0 120 65.0
Sed0008938 Sechium edule HOM05D003576 ORTHO05D004124 3.0e-36 155.2 120 65.0
Sabra10G0172200 Salix brachista HOM05D003576 ORTHO05D004124 3.9e-36 154.8 121 66.1
ClCG05G021030 Citrullus lanatus HOM05D003576 ORTHO05D004124 5.1e-36 154.5 120 65.0
CsaV3_6G036430 Cucumis sativus L. HOM05D003576 ORTHO05D004124 5.1e-36 154.5 121 65.3
Migut.F01985 Erythranthe guttata HOM05D003576 ORTHO05D004124 5.1e-36 154.5 118 66.1
MELO3C012428.2 Cucumis melo HOM05D003576 ORTHO05D004124 6.6e-36 154.1 120 65.0
FAN15G0532 Fragaria x ananassa HOM05D003576 ORTHO05D004124 6.6e-36 154.1 131 61.1
FAN15G1487 Fragaria x ananassa HOM05D003576 ORTHO05D004124 6.6e-36 154.1 131 61.1
Medtr6g033535 Medicago truncatula HOM05D003576 ORTHO05D004124 6.6e-36 154.1 120 65.8
Psat1g000080 Pisum sativum HOM05D003576 ORTHO05D004124 8.6e-36 153.7 120 65.8
CDE03G0459 Ceratophyllum demersum HOM05D003576 ORTHO05D004124 1.5e-35 152.9 109 71.6
CsaV3_5G036280 Cucumis sativus L. HOM05D003576 ORTHO05D004124 1.5e-35 152.9 120 65.0
Lsat_1_v5_gn_9_69180 Lactuca sativa HOM05D003576 ORTHO05D004124 1.5e-35 152.9 119 65.5
MELO3C019797.2 Cucumis melo HOM05D003576 ORTHO05D004124 1.9e-35 152.5 121 63.6
MSTRG.374 Avicennia marina HOM05D003576 ORTHO05D004124 2.5e-35 152.1 118 64.4
Solyc05g056110.3 Solanum lycopersicum HOM05D003576 ORTHO05D004124 2.5e-35 152.1 120 62.5
Sopen05g034520 Solanum pennellii HOM05D003576 ORTHO05D004124 2.5e-35 152.1 120 62.5
Ciclev10032124m.g Citrus clementina HOM05D003576 ORTHO05D004124 3.3e-35 151.8 121 66.1
FAN24G3530 Fragaria x ananassa HOM05D003576 ORTHO05D004124 3.3e-35 151.8 106 69.8
Manes.07G100300 Manihot esculenta HOM05D003576 ORTHO05D004124 3.3e-35 151.8 121 65.3
Glyma.16G155600 Glycine max HOM05D003576 ORTHO05D004124 4.3e-35 151.4 120 66.7
Glyma.02G074100 Glycine max HOM05D003576 ORTHO05D004124 5.6e-35 151.0 120 66.7
Phvul.004G083500 Phaseolus vulgaris HOM05D003576 ORTHO05D004124 5.6e-35 151.0 120 66.7
Haze_16891 Corylus avellana HOM05D003576 ORTHO05D004124 7.3e-35 150.6 145 57.2
ECA232G3526 Erigeron canadensis HOM05D003576 ORTHO05D004124 7.3e-35 150.6 118 64.4
Potri.010G222800 Populus trichocarpa HOM05D003576 ORTHO05D004124 9.5e-35 150.2 121 64.5
TPR.G36712 Trifolium pratense HOM05D003576 ORTHO05D004124 9.5e-35 150.2 116 65.5
Atru.chr12.756 Acer truncatum HOM05D003576 ORTHO05D004124 1.2e-34 149.8 120 63.3
Atru.chr12.780 Acer truncatum HOM05D003576 ORTHO05D004124 1.2e-34 149.8 120 63.3
Potri.008G039500 Populus trichocarpa HOM05D003576 ORTHO05D004124 2.1e-34 149.1 121 64.5
TWI15G0705 Tripterygium wilfordii HOM05D003576 ORTHO05D004124 6.2e-34 147.5 127 61.4
THA.LOC104809882 Tarenaya hassleriana HOM05D003576 ORTHO05D004124 8.1e-34 147.1 123 62.6
Sed0006763 Sechium edule HOM05D003576 ORTHO05D004124 1.1e-33 146.7 120 61.7
PSO339G2752 Papaver somniferum HOM05D003576 ORTHO05D004124 1.4e-33 146.4 120 65.8
PSO384G2156 Papaver somniferum HOM05D003576 ORTHO05D004124 1.4e-33 146.4 120 65.8
Sabra08G0027100 Salix brachista HOM05D003576 ORTHO05D004124 1.4e-33 146.4 121 63.6
ECA238G1405 Erigeron canadensis HOM05D003576 ORTHO05D004124 2.3e-33 145.6 112 66.1
THA.LOC104827300 Tarenaya hassleriana HOM05D003576 ORTHO05D004124 4.0e-33 144.8 123 61.8
Os02g0805900 Oryza sativa ssp. japonica HOM05D003576 ORTHO05D004124 6.8e-33 144.1 118 63.6
Zm00001eb273430 Zea mays HOM05D003576 ORTHO05D004124 6.8e-33 144.1 118 63.6
Zm00001eb290030 Zea mays HOM05D003576 ORTHO05D004124 6.8e-33 144.1 118 63.6
Zm00001eb366000 Zea mays HOM05D003576 ORTHO05D004124 6.8e-33 144.1 118 63.6
unitig_699.g19224 Utricularia gibba HOM05D003576 ORTHO05D004124 1.2e-32 143.3 123 60.2
Mapoly0154s0022 Marchantia polymorpha HOM05D003576 ORTHO05D004124 1.5e-32 142.9 108 67.6
arahy.Tifrunner.gnm1.ann1.33B581 Arachis hypogaea HOM05D003576 ORTHO05D004124 2.0e-32 142.5 121 62.0
arahy.Tifrunner.gnm1.ann1.THE0XD Arachis hypogaea HOM05D003576 ORTHO05D004124 2.0e-32 142.5 121 62.0
AagrBONN_evm.TU.Sc2ySwM_228.4941 Anthoceros agrestis HOM05D003576 ORTHO05D004124 2.6e-32 142.1 119 60.5
BcaNung01144 Brassica carinata HOM05D003576 ORTHO05D004124 3.4e-32 141.7 124 61.3
BcaC04g19105 Brassica carinata HOM05D003576 ORTHO05D004124 4.4e-32 141.4 122 60.7
BcaC04g19106 Brassica carinata HOM05D003576 ORTHO05D004124 4.4e-32 141.4 122 60.7
CARHR199870 Cardamine hirsuta HOM05D003576 ORTHO05D004124 4.4e-32 141.4 122 60.7
Thhalv10014094m.g Eutrema salsugineum HOM05D003576 ORTHO05D004124 4.4e-32 141.4 122 60.7
Sp6g30460 Schrenkiella parvula HOM05D003576 ORTHO05D004124 4.4e-32 141.4 122 60.7
AL6G24180 Arabidopsis lyrata HOM05D003576 ORTHO05D004124 5.8e-32 141.0 122 60.7
AT5G13570 Arabidopsis thaliana HOM05D003576 ORTHO05D004124 5.8e-32 141.0 122 60.7
C09p63530 Brassica napus HOM05D003576 ORTHO05D004124 7.6e-32 140.6 122 60.7
BolC9t59197H Brassica oleracea HOM05D003576 ORTHO05D004124 7.6e-32 140.6 122 60.7
SGA_v2.0_scaffold100G29594 Striga asiatica HOM05D003576 ORTHO05D004124 7.6e-32 140.6 122 60.7
BcaNung06333 Brassica carinata HOM05D003576 ORTHO05D004124 9.9e-32 140.2 123 61.0
A02p02030 Brassica napus HOM05D003576 ORTHO05D004124 9.9e-32 140.2 123 61.0
C02p06240 Brassica napus HOM05D003576 ORTHO05D004124 9.9e-32 140.2 123 61.0
BolC2t06566H Brassica oleracea HOM05D003576 ORTHO05D004124 9.9e-32 140.2 123 61.0
HanXRQChr15g0496951 Helianthus annuus HOM05D003576 ORTHO05D004124 2.2e-31 139.0 118 62.7
Aa31LG11G7770 Aethionema arabicum HOM05D003576 ORTHO05D004124 2.9e-31 138.7 123 58.5
Migut.F01761 Erythranthe guttata HOM05D003576 ORTHO05D004124 2.9e-31 138.7 118 58.5
SMO356G0089 Selaginella moellendorffii HOM05D003576 ORTHO05D004124 3.8e-31 138.3 104 67.3
Carub.0006s1173 Capsella rubella HOM05D003576 ORTHO05D004124 4.9e-31 137.9 122 59.8
BcaNung01897 Brassica carinata HOM05D003576 ORTHO05D004124 6.4e-31 137.5 123 60.2
BcaB01g05348 Brassica carinata HOM05D003576 ORTHO05D004124 1.1e-30 136.7 122 58.2
Pp3c10_5620 Physcomitrium patens HOM05D003576 ORTHO05D004124 1.1e-30 136.7 113 61.9
A10p24700 Brassica napus HOM05D003576 ORTHO05D004124 1.9e-30 136.0 122 59.8
BraA10t44533Z Brassica rapa HOM05D003576 ORTHO05D004124 1.2e-29 133.3 122 59.0
Cpa.g.sc53.83 Carica papaya HOM05D003576 ORTHO05D004124 1.6e-29 132.9 154 49.4
PGR044G0669 Punica granatum HOM05D003576 ORTHO05D004124 3.5e-29 131.7 120 57.5
CBR_g38931 Chara braunii HOM05D003576 ORTHO05D004124 3.9e-28 128.3 107 57.9
Pp3c2_16830 Physcomitrium patens HOM05D003576 ORTHO05D004124 5.1e-28 127.9 110 58.2
Duzib114G0196 Durio zibethinus HOM05D003576 ORTHO05D004124 6.6e-28 127.5 105 63.8
Pp3c1_22690 Physcomitrium patens HOM05D003576 ORTHO05D004124 1.1e-27 126.7 120 54.2
BcaC04g19104 Brassica carinata HOM05D003576 ORTHO05D004124 7.3e-27 124.0 105 60.0
Ah.16g106400 Amaranthus hybridus HOM05D003576 ORTHO05D004124 6.2e-26 120.9 78 73.1
A04p13320 Brassica napus HOM05D003576 ORTHO05D004124 6.9e-25 117.5 112 54.5
BcaB06g27487 Brassica carinata HOM05D003576 ORTHO05D004124 8.9e-25 117.1 112 53.6
C04p47100 Brassica napus HOM05D003576 ORTHO05D004124 1.5e-24 116.3 113 52.2
BolC4t26304H Brassica oleracea HOM05D003576 ORTHO05D004124 1.5e-24 116.3 113 52.2
BraA04t16990Z Brassica rapa HOM05D003576 ORTHO05D004124 2.6e-24 115.5 112 52.7
BcaB06g27491 Brassica carinata HOM05D003576 ORTHO05D004124 3.2e-22 108.6 104 51.0
BcaB06g27493 Brassica carinata HOM05D003576 ORTHO05D004124 3.2e-22 108.6 104 51.0
BcaB06g27496 Brassica carinata HOM05D003576 ORTHO05D004124 3.2e-22 108.6 104 51.0
BcaB06g27489 Brassica carinata HOM05D003576 ORTHO05D004124 6.0e-21 104.4 89 55.1
A04p13390 Brassica napus HOM05D003576 ORTHO05D004124 7.8e-21 104.0 104 51.0
BraA04t16997Z Brassica rapa HOM05D003576 ORTHO05D004124 3.9e-20 101.7 104 50.0
BraA04t16999Z Brassica rapa HOM05D003576 ORTHO05D004124 3.9e-20 101.7 104 50.0
C04p47110 Brassica napus HOM05D003576 ORTHO05D004124 5.1e-20 101.3 104 49.0
BolC4t26305H Brassica oleracea HOM05D003576 ORTHO05D004124 5.1e-20 101.3 104 49.0
BolC4t26308H Brassica oleracea HOM05D003576 ORTHO05D004124 5.1e-20 101.3 104 49.0
BolC4t26310H Brassica oleracea HOM05D003576 ORTHO05D004124 5.1e-20 101.3 104 49.0
A04p13360 Brassica napus HOM05D003576 ORTHO05D004124 6.6e-20 100.9 104 48.1
SHI19520 Sapria himalayana HOM05D003576 ORTHO05D004124 8.7e-20 100.5 91 57.1
BraA04t16993Z Brassica rapa HOM05D003576 ORTHO05D004124 2.5e-19 99.0 104 47.1
BraA04t16996Z Brassica rapa HOM05D003576 ORTHO05D004124 2.5e-19 99.0 104 48.1
A04p13340 Brassica napus HOM05D003576 ORTHO05D004124 1.6e-18 96.3 104 46.2
A04p13380 Brassica napus HOM05D003576 ORTHO05D004124 1.6e-18 96.3 104 46.2
A04p13410 Brassica napus HOM05D003576 ORTHO05D004124 1.6e-18 96.3 104 46.2
MCO14G142 Micromonas commoda HOM05D003576 ORTHO05D004124 3.6e-18 95.1 105 44.8
TAR636G0323 Trochodendron aralioides HOM05D003576 ORTHO05D004124 6.2e-18 94.4 106 51.9
Psat1g098640 Pisum sativum HOM05D003576 ORTHO05D004124 1.1e-17 93.6 61 73.8
BraA04t16991Z Brassica rapa HOM05D003576 ORTHO05D004124 3.1e-17 92.0 118 40.7
CDE03G0119 Ceratophyllum demersum HOM05D003576 ORTHO05D004124 3.5e-13 78.6 106 44.3
Cfa023847 Carpinus fangiana HOM05D003576 ORTHO05D004124 1.3e-12 76.6 101 39.6
C04p47130 Brassica napus HOM05D003576 ORTHO05D004124 2.5e-11 72.4 87 42.5
SEGI_06233 Sequoiadendron giganteum HOM05D003576 ORTHO05D004124 2.5e-11 72.4 100 40.0
PRCOL_00003742 Prasinoderma coloniale HOM05D003576 ORTHO05D004124 1.6e-10 69.7 76 48.7
Sp7g03020 Schrenkiella parvula HOM05D003576 ORTHO05D004124 3.6e-10 68.6 93 39.8
Sp3g29060 Schrenkiella parvula HOM05D003576 ORTHO05D004124 6.9e-09 64.3 91 40.7
BcaNung01892 Brassica carinata HOM05D003576 ORTHO05D000199 9.0e-09 63.9 55 63.6
Cre07.g344850 Chlamydomonas reinhardtii HOM05D003576 ORTHO05D004124 1.5e-08 63.2 110 34.5
Sp7g01550 Schrenkiella parvula HOM05D003576 ORTHO05D004124 3.4e-08 62.0 118 37.3
BolC3t13209H Brassica oleracea HOM05D003576 ORTHO05D004124 1.1e-06 57.0 95 41.1
C03p07100 Brassica napus HOM05D002836 ORTHO05D003107 2.4e-06 55.8 95 40.0


User provided reference genes

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