Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 5.2e-96 354.4 178 100.0
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 2.6e-39 166.0 98 78.6
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 2.5e-37 159.5 178 53.4
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 3.2e-37 159.1 98 72.4
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 5.5e-37 158.3 98 70.4
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 5.1e-35 151.8 98 67.3
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 5.7e-34 148.3 96 70.8
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 9.7e-34 147.5 98 67.3
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 4.8e-33 145.2 98 67.3
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 1.4e-32 143.7 97 64.9
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 2.4e-32 142.9 97 66.0
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 3.1e-32 142.5 100 64.0
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 5.3e-32 141.7 96 68.8
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 9.0e-32 141.0 96 65.6
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 9.0e-32 141.0 96 67.7
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 9.0e-32 141.0 96 66.7
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.4e-31 139.0 98 64.3
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 4.5e-31 138.7 95 67.4
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 4.5e-31 138.7 98 65.3
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 4.5e-31 138.7 98 65.3
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 5.9e-31 138.3 96 65.6
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 7.6e-31 137.9 98 65.3
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 1.0e-30 137.5 96 64.6
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 1.0e-30 137.5 96 64.6
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 1.3e-30 137.1 98 66.3
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 1.7e-30 136.7 97 63.9
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 1.7e-30 136.7 97 63.9
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 2.2e-30 136.3 94 66.0
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 2.2e-30 136.3 99 66.7
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 2.9e-30 136.0 98 65.3
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 2.9e-30 136.0 96 64.6
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 2.9e-30 136.0 96 66.7
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 3.8e-30 135.6 97 61.9
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 6.5e-30 134.8 98 63.3
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 8.5e-30 134.4 96 64.6
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 1.1e-29 134.0 96 63.5
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 1.1e-29 134.0 93 66.7
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.1e-29 134.0 95 62.1
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.1e-29 134.0 95 62.1
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 1.4e-29 133.7 98 65.3
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 1.4e-29 133.7 98 63.3
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 1.9e-29 133.3 100 66.0
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 2.5e-29 132.9 98 63.3
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 2.5e-29 132.9 98 62.2
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 3.2e-29 132.5 100 61.0
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 3.2e-29 132.5 100 66.0
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 1.2e-28 130.6 96 62.5
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 1.6e-28 130.2 96 63.5
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 2.1e-28 129.8 97 59.8
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 2.7e-28 129.4 165 47.3
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 3.6e-28 129.0 98 60.2
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 4.6e-28 128.6 98 61.2
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 4.6e-28 128.6 97 61.9
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 1.0e-27 127.5 111 57.7
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.3e-27 127.1 97 60.8
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 1.3e-27 127.1 97 59.8
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 1.8e-27 126.7 98 60.2
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 2.3e-27 126.3 98 60.2
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 3.0e-27 125.9 97 59.8
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 3.0e-27 125.9 96 61.5
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 3.9e-27 125.6 94 62.8
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 3.9e-27 125.6 96 61.5
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 6.7e-27 124.8 97 57.7
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.5e-26 123.6 162 46.9
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 1.5e-26 123.6 98 59.2
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 1.9e-26 123.2 162 46.3
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 1.9e-26 123.2 94 60.6
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 2.5e-26 122.9 94 60.6
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.5e-26 122.9 94 60.6
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 3.3e-26 122.5 162 47.5
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 5.7e-26 121.7 162 46.9
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 5.7e-26 121.7 162 46.9
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 5.7e-26 121.7 96 60.4
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 5.7e-26 121.7 98 57.1
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 7.4e-26 121.3 97 59.8
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 9.7e-26 120.9 162 46.3
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 1.3e-25 120.6 162 46.3
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.3e-25 120.6 94 59.6
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.7e-25 120.2 73 68.5
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 2.2e-25 119.8 94 62.8
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 2.8e-25 119.4 162 46.9
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 2.8e-25 119.4 98 57.1
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 2.8e-25 119.4 97 58.8
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 3.7e-25 119.0 97 58.8
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 3.7e-25 119.0 94 59.6
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 6.3e-25 118.2 162 45.7
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 2.4e-24 116.3 99 55.6
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 5.3e-24 115.2 162 44.4
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 5.3e-24 115.2 97 55.7
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 6.9e-24 114.8 174 43.7
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 2.0e-23 113.2 97 54.6
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 7.7e-23 111.3 98 53.1
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 2.9e-22 109.4 94 52.1
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 3.8e-22 109.0 97 55.7
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 3.8e-22 109.0 93 54.8
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 3.8e-22 109.0 97 51.5
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 8.5e-22 107.8 97 52.6
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 1.6e-20 103.6 97 51.5
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 2.6e-18 96.3 99 48.5
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 2.4e-16 89.7 97 45.4
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 9.1e-16 87.8 60 61.7
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 2.0e-15 86.7 94 50.0
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 2.2e-14 83.2 91 41.8
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 3.6e-12 75.9 81 42.0
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 3.6e-12 75.9 74 51.4
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 3.9e-11 72.4 48 68.8
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.7e-09 65.9 95 40.0
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 8.2e-09 64.7 58 51.7
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 8.2e-09 64.7 60 55.0
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 2.0e-07 60.1 57 47.4
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 2.2e-06 56.6 187 28.3
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 5.0e-06 55.5 83 32.5


User provided reference genes

Program Settings