Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G0736 Trochodendron aralioides HOM05D002822 ORTHO05D415434 1.3e-64 249.6 131 100.0
TAR636G1209 Trochodendron aralioides HOM05D002822 ORTHO05D003179 1.4e-42 176.4 93 95.7
TAR636G0532 Trochodendron aralioides HOM05D002822 ORTHO05D003179 2.8e-38 162.2 81 97.5
TAR365G0855 Trochodendron aralioides HOM05D002822 ORTHO05D003179 1.4e-26 123.2 95 70.5
TAR365G1259 Trochodendron aralioides HOM05D002822 ORTHO05D003179 9.3e-26 120.6 95 69.5
Nn5g30166 Nelumbo nucifera HOM05D002822 ORTHO05D003179 6.9e-21 104.4 91 60.4
GSVIVG01018788001 Vitis vinifera HOM05D002822 ORTHO05D003179 9.3e-18 94.0 94 58.5
Hma1.2p1_0743F.1_g211620 Hydrangea macrophylla HOM05D002822 ORTHO05D003179 3.5e-17 92.0 90 57.8
Aqoxy7G00033 Aquilegia oxysepala HOM05D002822 ORTHO05D003179 4.6e-17 91.7 89 57.3
Aqoxy6G00179 Aquilegia oxysepala HOM05D002822 ORTHO05D003179 7.9e-17 90.9 77 58.4
MBI05_g15348_MAGBIO Magnolia biondii HOM05D002822 ORTHO05D003179 2.3e-16 89.4 89 58.4
Potri.005G114800 Populus trichocarpa HOM05D002822 ORTHO05D003179 6.7e-16 87.8 87 56.3
Potri.007G012200 Populus trichocarpa HOM05D002822 ORTHO05D003179 6.7e-16 87.8 81 55.6
CSS0040682 Camellia sinensis var. sinensis HOM05D002822 ORTHO05D003179 1.1e-15 87.0 69 65.2
Lj4C218G4 Lonicera japonica HOM05D002822 ORTHO05D003179 1.9e-15 86.3 90 55.6
Manes.01G145400 Manihot esculenta HOM05D002822 ORTHO05D003179 1.9e-15 86.3 87 54.0
Manes.02G103900 Manihot esculenta HOM05D002822 ORTHO05D003179 5.7e-15 84.7 83 57.8
QL06p032625 Quercus lobata HOM05D002822 ORTHO05D003179 8.2e-14 80.9 95 50.5
Rhsim08G0033900 Rhododendron simsii HOM05D002822 ORTHO05D003179 2.4e-13 79.3 88 50.0
TWI53G0573 Tripterygium wilfordii HOM05D002822 ORTHO05D003179 9.0e-13 77.4 82 53.7
Actinidia28702 Actinidia chinensis HOM05D002822 ORTHO05D003179 1.2e-12 77.0 57 68.4
Duzib187G1364 Durio zibethinus HOM05D002822 ORTHO05D003179 1.2e-12 77.0 96 49.0
TWI09G0155 Tripterygium wilfordii HOM05D002822 ORTHO05D003179 2.0e-12 76.3 82 52.4
vmacro18417 Vaccinium macrocarpon HOM05D002822 ORTHO05D003179 2.0e-12 76.3 85 47.1
COL.COLO4_21917 Corchorus olitorius HOM05D002822 ORTHO05D003179 4.5e-12 75.1 95 46.3
Nitab4.5_0003271g0040 Nicotiana tabacum HOM05D002822 ORTHO05D003179 7.6e-12 74.3 89 47.2
Cpa.g.sc6.243 Carica papaya HOM05D002822 ORTHO05D003179 1.0e-11 73.9 91 50.5
Sabra07G0009500 Salix brachista HOM05D002822 ORTHO05D003179 1.7e-11 73.2 81 54.3
TWI79G0578 Tripterygium wilfordii HOM05D002822 ORTHO05D003179 1.7e-11 73.2 81 50.6
Oeu035304.1 Olea europaea HOM05D002822 ORTHO05D003179 6.5e-11 71.2 87 49.4
Thecc.01G019600 Theobroma cacao HOM05D002822 ORTHO05D003179 6.5e-11 71.2 89 46.1
ECA246G0773 Erigeron canadensis HOM05D002822 ORTHO05D003179 1.4e-10 70.1 54 66.7
Nitab4.5_0006286g0010 Nicotiana tabacum HOM05D002822 ORTHO05D003179 1.4e-10 70.1 89 44.9
Solyc02g083960.4 Solanum lycopersicum HOM05D002822 ORTHO05D003179 3.2e-10 68.9 87 47.1
SalBow3G2907 Salvia bowleyana HOM05D002822 ORTHO05D003179 4.2e-10 68.6 94 46.8
Sopen02g028760 Solanum pennellii HOM05D002822 ORTHO05D003179 4.2e-10 68.6 87 47.1
THA.LOC104819751 Tarenaya hassleriana HOM05D002822 ORTHO05D003179 4.2e-10 68.6 79 49.4
MSTRG.2709 Avicennia marina HOM05D002822 ORTHO05D003179 5.5e-10 68.2 62 54.8
Oeu062502.1 Olea europaea HOM05D002822 ORTHO05D003179 5.5e-10 68.2 87 49.4
Cfa006968 Carpinus fangiana HOM05D002822 ORTHO05D003179 7.2e-10 67.8 63 50.8
DCAR_021500 Daucus carota HOM05D002822 ORTHO05D003179 7.2e-10 67.8 73 53.4
Atru.chr3.794 Acer truncatum HOM05D002822 ORTHO05D003179 9.3e-10 67.4 77 49.4
PGSC0003DMG400003560 Solanum tuberosum HOM05D002822 ORTHO05D003179 9.3e-10 67.4 87 46.0
Cc07_g10650 Coffea canephora HOM05D002822 ORTHO05D003179 1.2e-09 67.0 62 54.8
MD02G1133100 Malus domestica HOM05D002822 ORTHO05D003179 1.2e-09 67.0 53 60.4
PSO541G0765 Papaver somniferum HOM05D002822 ORTHO05D003179 1.2e-09 67.0 77 50.6
Sed0005535 Sechium edule HOM05D002822 ORTHO05D003179 1.2e-09 67.0 97 45.4
HanXRQChr16g0531291 Helianthus annuus HOM05D002822 ORTHO05D003179 1.6e-09 66.6 77 49.4
TWI73G0572 Tripterygium wilfordii HOM05D002822 ORTHO05D003179 2.1e-09 66.2 81 46.9
PSO675G5671 Papaver somniferum HOM05D002822 ORTHO05D003179 2.7e-09 65.9 77 49.4
Haze_03770 Corylus avellana HOM05D002822 ORTHO05D003179 4.6e-09 65.1 51 56.9
CiPaw.07G058100 Carya illinoinensis HOM05D002822 ORTHO05D003179 7.9e-09 64.3 82 43.9
Nitab4.5_0000188g0100 Nicotiana tabacum HOM05D002822 ORTHO05D003179 1.0e-08 63.9 85 43.5
VMungo0647G2487 Vigna mungo HOM05D002822 ORTHO05D003179 1.0e-08 63.9 88 46.6
Thhalv10012104m.g Eutrema salsugineum HOM05D002822 ORTHO05D003179 1.3e-08 63.5 41 68.3
Gorai.007G195400 Gossypium raimondii HOM05D002822 ORTHO05D003179 1.8e-08 63.2 89 44.9
MD15G1245500 Malus domestica HOM05D002822 ORTHO05D003179 1.8e-08 63.2 77 46.8
arahy.Tifrunner.gnm1.ann1.ZUG4EU Arachis hypogaea HOM05D002822 ORTHO05D003179 2.3e-08 62.8 80 48.8
Ciclev10025381m.g Citrus clementina HOM05D002822 ORTHO05D003179 2.3e-08 62.8 79 48.1
Gohir.A11G175700 Gossypium hirsutum HOM05D002822 ORTHO05D003179 2.3e-08 62.8 89 44.9
Peaxi162Scf00083g00623 Petunia axillaris HOM05D002822 ORTHO05D003179 2.3e-08 62.8 91 48.4
Nitab4.5_0002337g0020 Nicotiana tabacum HOM05D002822 ORTHO05D003179 3.0e-08 62.4 56 53.6
CAN.G1671.9 Capsicum annuum HOM05D002822 ORTHO05D003179 3.9e-08 62.0 87 43.7
RcHm_v2.0_Chr2g0099521 Rosa chinensis HOM05D002822 ORTHO05D003179 3.9e-08 62.0 78 46.2
Aa31LG8G15130 Aethionema arabicum HOM05D002822 ORTHO05D003179 5.1e-08 61.6 52 59.6
arahy.Tifrunner.gnm1.ann1.2M720R Arachis hypogaea HOM05D002822 ORTHO05D003179 5.1e-08 61.6 80 47.5
Gohir.D11G183500 Gossypium hirsutum HOM05D002822 ORTHO05D003179 5.1e-08 61.6 89 43.8
CiPaw.08G132100 Carya illinoinensis HOM05D002822 ORTHO05D003179 6.7e-08 61.2 79 45.6
CsaV3_6G047040 Cucumis sativus L. HOM05D002822 ORTHO05D003179 6.7e-08 61.2 51 58.8
Duzib147G1511 Durio zibethinus HOM05D002822 ORTHO05D003179 6.7e-08 61.2 86 43.0
Carub.0007s0414 Capsella rubella HOM05D002822 ORTHO05D003179 8.7e-08 60.8 31 80.6
ClCG01G020250 Citrullus lanatus HOM05D002822 ORTHO05D003179 8.7e-08 60.8 77 45.5
Glyma.17G220300 Glycine max HOM05D002822 ORTHO05D003179 8.7e-08 60.8 78 43.6
AL7G14950 Arabidopsis lyrata HOM05D002822 ORTHO05D003179 1.1e-07 60.5 31 80.6
Thhalv10022661m.g Eutrema salsugineum HOM05D002822 ORTHO05D003179 1.9e-07 59.7 54 53.7
BcaNung00765 Brassica carinata HOM05D002822 ORTHO05D003179 2.5e-07 59.3 31 77.4
C01p02940 Brassica napus HOM05D002822 ORTHO05D003179 2.5e-07 59.3 31 77.4
MELO3C007897.2 Cucumis melo HOM05D002822 ORTHO05D003179 2.5e-07 59.3 80 47.5
FvH4_1g11920 Fragaria vesca HOM05D002822 ORTHO05D003179 2.5e-07 59.3 77 44.2
Prupe.7G167600 Prunus persica HOM05D002822 ORTHO05D003179 2.5e-07 59.3 47 59.6
Sc16g0002130 Simmondsia chinensis HOM05D002822 ORTHO05D003179 2.5e-07 59.3 37 75.7
AL3G50990 Arabidopsis lyrata HOM05D002822 ORTHO05D003179 3.3e-07 58.9 49 55.1
FAN23G1153 Fragaria x ananassa HOM05D002822 ORTHO05D003179 3.3e-07 58.9 77 46.8
A07p02980 Brassica napus HOM05D002822 ORTHO05D003179 4.3e-07 58.5 37 67.6
BraA07t28094Z Brassica rapa HOM05D002822 ORTHO05D003179 4.3e-07 58.5 37 67.6
ATR0933G004 Amborella trichopoda HOM05D002822 ORTHO05D003179 5.7e-07 58.2 70 47.1
AT2G17970 Arabidopsis thaliana HOM05D002822 ORTHO05D003179 5.7e-07 58.2 36 69.4
FAN26G0856 Fragaria x ananassa HOM05D002822 ORTHO05D003179 5.7e-07 58.2 77 46.8
FAN28G2128 Fragaria x ananassa HOM05D002822 ORTHO05D003179 5.7e-07 58.2 77 46.8
Phvul.001G044000 Phaseolus vulgaris HOM05D002822 ORTHO05D003179 5.7e-07 58.2 94 43.6
CARHR108440 Cardamine hirsuta HOM05D002822 ORTHO05D003179 7.4e-07 57.8 44 61.4
CARHR244490 Cardamine hirsuta HOM05D002822 ORTHO05D003179 7.4e-07 57.8 42 57.1
FAN19G1925 Fragaria x ananassa HOM05D002822 ORTHO05D003179 7.4e-07 57.8 77 42.9
Glyma.14G106000 Glycine max HOM05D002822 ORTHO05D003179 7.4e-07 57.8 50 50.0
Medtr1g014720 Medicago truncatula HOM05D002822 ORTHO05D003179 9.7e-07 57.4 38 60.5
Psat6g024280 Pisum sativum HOM05D002822 ORTHO05D003179 9.7e-07 57.4 97 45.4
Aa31LG6G13040 Aethionema arabicum HOM05D002822 ORTHO05D003179 1.3e-06 57.0 64 46.9
Lj5g0010814 Lotus japonicus HOM05D002822 ORTHO05D003179 1.3e-06 57.0 50 54.0
Ah.03g141740 Amaranthus hybridus HOM05D002822 ORTHO05D003179 1.6e-06 56.6 91 41.8
BcaB03g16577 Brassica carinata HOM05D002822 ORTHO05D003179 1.6e-06 56.6 37 62.2
Lsat_1_v5_gn_3_74260 Lactuca sativa HOM05D002822 ORTHO05D003179 1.6e-06 56.6 31 83.9
Lalb_Chr14g0375441 Lupinus albus HOM05D002822 ORTHO05D003179 1.6e-06 56.6 92 41.3
Sp1g35890 Schrenkiella parvula HOM05D002822 ORTHO05D003179 1.6e-06 56.6 36 69.4
AT4G36090 Arabidopsis thaliana HOM05D002822 ORTHO05D003179 2.2e-06 56.2 31 74.2
Migut.H02172 Erythranthe guttata HOM05D002822 ORTHO05D003179 2.2e-06 56.2 100 45.0
Lalb_Chr23g0268091 Lupinus albus HOM05D002822 ORTHO05D003179 2.2e-06 56.2 98 43.9
Sed0016265 Sechium edule HOM05D002822 ORTHO05D003179 2.2e-06 56.2 74 40.5
AL1G55850 Arabidopsis lyrata HOM05D002822 ORTHO05D003179 2.8e-06 55.8 33 75.8
Sp3g31380 Schrenkiella parvula HOM05D002822 ORTHO05D003179 2.8e-06 55.8 30 80.0
BcaC06g36345 Brassica carinata HOM05D002822 ORTHO05D003179 3.7e-06 55.5 37 64.9
A01p02650 Brassica napus HOM05D002822 ORTHO05D003179 3.7e-06 55.5 31 74.2
C07p05090 Brassica napus HOM05D002822 ORTHO05D003179 3.7e-06 55.5 37 64.9
BolC7t40907H Brassica oleracea HOM05D002822 ORTHO05D003179 3.7e-06 55.5 37 64.9
BraA01t00251Z Brassica rapa HOM05D002822 ORTHO05D003179 3.7e-06 55.5 31 74.2
CAN.G576.4 Capsicum annuum HOM05D002822 ORTHO05D003179 3.7e-06 55.5 74 41.9
CARHR038990 Cardamine hirsuta HOM05D002822 ORTHO05D003179 3.7e-06 55.5 35 74.3
PGR102G0419 Punica granatum HOM05D002822 ORTHO05D003179 4.8e-06 55.1 96 38.5
Sp7g33870 Schrenkiella parvula HOM05D002822 ORTHO05D003179 4.8e-06 55.1 31 74.2
TPR.G38850 Trifolium pratense HOM05D002822 ORTHO05D003179 4.8e-06 55.1 31 74.2
Carub.0003s3209 Capsella rubella HOM05D002822 ORTHO05D003179 6.3e-06 54.7 42 59.5
Aa31LG10G4950 Aethionema arabicum HOM05D002822 ORTHO05D003179 8.2e-06 54.3 39 64.1


User provided reference genes

Program Settings