Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G2225 Trochodendron aralioides HOM05D003658 ORTHO05D004457 8.6e-47 189.9 90 100.0
Nn3g19734 Nelumbo nucifera HOM05D003658 ORTHO05D004457 5.8e-43 177.2 88 94.3
COL.COLO4_32786 Corchorus olitorius HOM05D003658 ORTHO05D004457 1.7e-42 175.6 88 94.3
Nn2g13001 Nelumbo nucifera HOM05D003658 ORTHO05D004457 1.7e-42 175.6 88 94.3
Thecc.07G099900 Theobroma cacao HOM05D003658 ORTHO05D004457 1.7e-42 175.6 88 94.3
GSVIVG01025125001 Vitis vinifera HOM05D003658 ORTHO05D004457 2.9e-42 174.9 88 93.2
Duzib213G0488 Durio zibethinus HOM05D003658 ORTHO05D004457 3.7e-42 174.5 88 93.2
TAR623G0185 Trochodendron aralioides HOM05D003658 ORTHO05D004457 3.7e-42 174.5 88 93.2
CSS0031195 Camellia sinensis var. sinensis HOM05D003658 ORTHO05D004457 4.9e-42 174.1 88 93.2
CSS0048503 Camellia sinensis var. sinensis HOM05D003658 ORTHO05D004457 4.9e-42 174.1 88 93.2
Duzib170G0243 Durio zibethinus HOM05D003658 ORTHO05D004457 6.4e-42 173.7 88 93.2
MD11G1125100 Malus domestica HOM05D003658 ORTHO05D004457 6.4e-42 173.7 88 93.2
Prupe.6G093800 Prunus persica HOM05D003658 ORTHO05D004457 6.4e-42 173.7 88 93.2
MSTRG.22380 Avicennia marina HOM05D003658 ORTHO05D004457 1.4e-41 172.6 88 90.9
MSTRG.24196 Avicennia marina HOM05D003658 ORTHO05D004457 1.4e-41 172.6 88 92.0
CSS0000103 Camellia sinensis var. sinensis HOM05D003658 ORTHO05D004457 1.4e-41 172.6 88 92.0
CSS0002392 Camellia sinensis var. sinensis HOM05D003658 ORTHO05D004457 1.4e-41 172.6 88 92.0
Oeu046772.1 Olea europaea HOM05D003658 ORTHO05D004457 1.4e-41 172.6 88 90.9
TAR369G0890 Trochodendron aralioides HOM05D003658 ORTHO05D004457 1.4e-41 172.6 88 93.2
Eucgr.F04457 Eucalyptus grandis HOM05D003658 ORTHO05D004457 1.9e-41 172.2 88 93.2
PSO782G2702 Papaver somniferum HOM05D003658 ORTHO05D004457 1.9e-41 172.2 88 92.0
Gohir.D01G046800 Gossypium hirsutum HOM05D003658 ORTHO05D004457 2.4e-41 171.8 88 92.0
Gorai.002G066300 Gossypium raimondii HOM05D003658 ORTHO05D004457 2.4e-41 171.8 88 92.0
Potri.010G023100 Populus trichocarpa HOM05D003658 ORTHO05D004457 2.4e-41 171.8 88 92.0
PGR031G3879 Punica granatum HOM05D003658 ORTHO05D004457 2.4e-41 171.8 88 93.2
HanXRQChr15g0493841 Helianthus annuus HOM05D003658 ORTHO05D004457 3.2e-41 171.4 88 92.0
SGA_v2.0_scaffold19G08651 Striga asiatica HOM05D003658 ORTHO05D004457 3.2e-41 171.4 88 90.9
CDE02G3705 Ceratophyllum demersum HOM05D003658 ORTHO05D004457 4.1e-41 171.0 88 90.9
CDE08G0949 Ceratophyllum demersum HOM05D003658 ORTHO05D004457 4.1e-41 171.0 88 90.9
ECA234G0865 Erigeron canadensis HOM05D003658 ORTHO05D004457 4.1e-41 171.0 88 90.9
FvH4_1g25660 Fragaria vesca HOM05D003658 ORTHO05D004457 4.1e-41 171.0 88 90.9
RcHm_v2.0_Chr2g0124141 Rosa chinensis HOM05D003658 ORTHO05D004457 4.1e-41 171.0 88 90.9
AL1G43750 Arabidopsis lyrata HOM05D003658 ORTHO05D004457 5.4e-41 170.6 88 89.8
AT1G29900 Arabidopsis thaliana HOM05D003658 ORTHO05D004457 5.4e-41 170.6 88 89.8
CANSAT35G1266 Cannabis sativa HOM05D003658 ORTHO05D004457 5.4e-41 170.6 88 90.9
MELO3C013218.2 Cucumis melo HOM05D003658 ORTHO05D004457 5.4e-41 170.6 88 90.9
CsaV3_7G021350 Cucumis sativus L. HOM05D003658 ORTHO05D004457 5.4e-41 170.6 88 90.9
Sed0019661 Sechium edule HOM05D003658 ORTHO05D004457 5.4e-41 170.6 88 90.9
HPP92_005503 Vanilla planifolia HOM05D003658 ORTHO05D004457 5.4e-41 170.6 88 89.8
Cc10_g16400 Coffea canephora HOM05D003658 ORTHO05D004457 7.0e-41 170.2 88 89.8
Actinidia03749 Actinidia chinensis HOM05D003658 ORTHO05D004457 9.2e-41 169.9 88 92.0
Ah.05g175890 Amaranthus hybridus HOM05D003658 ORTHO05D004457 9.2e-41 169.9 88 89.8
Aqoxy7G00983 Aquilegia oxysepala HOM05D003658 ORTHO05D004457 9.2e-41 169.9 88 90.9
HanXRQChr09g0251621 Helianthus annuus HOM05D003658 ORTHO05D004457 9.2e-41 169.9 88 89.8
RcHm_v2.0_Chr7g0219181 Rosa chinensis HOM05D003658 ORTHO05D004457 9.2e-41 169.9 87 92.0
Sed0011385 Sechium edule HOM05D003658 ORTHO05D004457 9.2e-41 169.9 88 89.8
THA.LOC104800615 Tarenaya hassleriana HOM05D003658 ORTHO05D004457 9.2e-41 169.9 88 89.8
TWI75G0848 Tripterygium wilfordii HOM05D003658 ORTHO05D004457 9.2e-41 169.9 88 89.8
Cfa011371 Carpinus fangiana HOM05D003658 ORTHO05D004457 1.2e-40 169.5 88 89.8
Ciclev10027703m.g Citrus clementina HOM05D003658 ORTHO05D004457 1.2e-40 169.5 88 87.5
Gohir.A01G060300 Gossypium hirsutum HOM05D003658 ORTHO05D004457 1.2e-40 169.5 88 90.9
Lj3g0017853 Lotus japonicus HOM05D003658 ORTHO05D004457 1.6e-40 169.1 88 90.9
MBI17_g19523_MAGBIO Magnolia biondii HOM05D003658 ORTHO05D004457 1.6e-40 169.1 88 89.8
MBI17_g43655_MAGBIO Magnolia biondii HOM05D003658 ORTHO05D004457 1.6e-40 169.1 88 89.8
THA.LOC104826356 Tarenaya hassleriana HOM05D003658 ORTHO05D004457 1.6e-40 169.1 88 88.6
Sp1g25780 Schrenkiella parvula HOM05D003658 ORTHO05D004457 2.0e-40 168.7 88 88.6
PGSC0003DMG400007504 Solanum tuberosum HOM05D003658 ORTHO05D004457 2.0e-40 168.7 88 89.8
CARHR029540 Cardamine hirsuta HOM05D003658 ORTHO05D004457 2.7e-40 168.3 88 88.6
QL01p036935 Quercus lobata HOM05D003658 ORTHO05D004457 2.7e-40 168.3 90 90.0
Atru.chr3.3712 Acer truncatum HOM05D003658 ORTHO05D004457 3.5e-40 167.9 88 89.8
Thhalv10006598m.g Eutrema salsugineum HOM05D003658 ORTHO05D004457 3.5e-40 167.9 88 88.6
Solyc06g075340.4 Solanum lycopersicum HOM05D003658 ORTHO05D004457 3.5e-40 167.9 88 88.6
Sopen06g031760 Solanum pennellii HOM05D003658 ORTHO05D004457 3.5e-40 167.9 88 88.6
EL10Ac1g00972 Beta vulgaris HOM05D003658 ORTHO05D004457 4.6e-40 167.5 88 89.8
AUR62004284 Chenopodium quinoa HOM05D003658 ORTHO05D004457 4.6e-40 167.5 88 89.8
AUR62033373 Chenopodium quinoa HOM05D003658 ORTHO05D004457 4.6e-40 167.5 88 89.8
Aa31LG4G17270 Aethionema arabicum HOM05D003658 ORTHO05D004457 6.0e-40 167.2 88 88.6
DCAR_016522 Daucus carota HOM05D003658 ORTHO05D004457 6.0e-40 167.2 90 88.9
Carub.0001s2812 Capsella rubella HOM05D003658 ORTHO05D004457 7.8e-40 166.8 88 88.6
MD03G1111400 Malus domestica HOM05D003658 ORTHO05D004457 7.8e-40 166.8 88 90.9
Hund30148 Selenicereus undatus HOM05D003658 ORTHO05D004457 7.8e-40 166.8 88 89.8
Hund30149 Selenicereus undatus HOM05D003658 ORTHO05D004457 7.8e-40 166.8 88 89.8
TWI31G0613 Tripterygium wilfordii HOM05D003658 ORTHO05D004457 7.8e-40 166.8 88 87.5
Migut.N03234 Erythranthe guttata HOM05D003658 ORTHO05D004457 1.0e-39 166.4 88 88.6
Manes.04G025400 Manihot esculenta HOM05D003658 ORTHO05D004457 1.0e-39 166.4 88 87.5
Oeu047812.2 Olea europaea HOM05D003658 ORTHO05D004457 1.0e-39 166.4 88 88.6
CiPaw.13G106400 Carya illinoinensis HOM05D003658 ORTHO05D004457 1.3e-39 166.0 86 90.7
ATR0561G124 Amborella trichopoda HOM05D003658 ORTHO05D004457 1.7e-39 165.6 88 89.8
Glyma.13G328600 Glycine max HOM05D003658 ORTHO05D004457 1.7e-39 165.6 88 87.5
BcaB07g32573 Brassica carinata HOM05D003658 ORTHO05D004457 3.0e-39 164.9 88 87.5
BcaC05g27003 Brassica carinata HOM05D003658 ORTHO05D004457 3.0e-39 164.9 88 87.5
A09p36600 Brassica napus HOM05D003658 ORTHO05D004457 3.0e-39 164.9 88 87.5
C05p28660 Brassica napus HOM05D003658 ORTHO05D004457 3.0e-39 164.9 88 87.5
BolC5t31587H Brassica oleracea HOM05D003658 ORTHO05D004457 3.0e-39 164.9 88 87.5
BraA09t39180Z Brassica rapa HOM05D003658 ORTHO05D004457 3.0e-39 164.9 88 87.5
Zm00001eb160030 Zea mays HOM05D003658 ORTHO05D004457 3.9e-39 164.5 88 87.5
Zm00001eb356970 Zea mays HOM05D003658 ORTHO05D004457 3.9e-39 164.5 88 87.5
Zm00001eb440860 Zea mays HOM05D003658 ORTHO05D004457 3.9e-39 164.5 88 87.5
Mapoly0126s0034 Marchantia polymorpha HOM05D003658 ORTHO05D004457 6.6e-39 163.7 88 86.4
Phvul.005G137400 Phaseolus vulgaris HOM05D003658 ORTHO05D004457 6.6e-39 163.7 88 88.6
Sc12g0008310 Simmondsia chinensis HOM05D003658 ORTHO05D004457 6.6e-39 163.7 88 87.5
Pp3c1_18250 Physcomitrium patens HOM05D003658 ORTHO05D004457 8.6e-39 163.3 88 86.4
Lalb_Chr14g0374811 Lupinus albus HOM05D003658 ORTHO05D004457 1.1e-38 162.9 88 88.6
Lalb_Chr24g0394441 Lupinus albus HOM05D003658 ORTHO05D004457 1.5e-38 162.5 88 87.5
DCAR_026092 Daucus carota HOM05D003658 ORTHO05D004457 1.9e-38 162.2 88 88.6
Pp3c2_19430 Physcomitrium patens HOM05D003658 ORTHO05D004457 1.9e-38 162.2 88 85.2
Actinidia24075 Actinidia chinensis HOM05D003658 ORTHO05D004457 2.5e-38 161.8 85 91.8
TPR.G11612 Trifolium pratense HOM05D003658 ORTHO05D004457 2.5e-38 161.8 88 87.5
VMungo1080G1458 Vigna mungo HOM05D003658 ORTHO05D004457 2.5e-38 161.8 88 86.4
Medtr2g093280 Medicago truncatula HOM05D003658 ORTHO05D004457 3.3e-38 161.4 88 87.5
arahy.Tifrunner.gnm1.ann1.F0P9EH Arachis hypogaea HOM05D003658 ORTHO05D004457 4.3e-38 161.0 88 86.4
AagrBONN_evm.TU.Sc2ySwM_228.578 Anthoceros agrestis HOM05D003658 ORTHO05D004457 5.6e-38 160.6 88 84.1
arahy.Tifrunner.gnm1.ann1.HT4L1Y Arachis hypogaea HOM05D003658 ORTHO05D004457 5.6e-38 160.6 88 86.4
arahy.Tifrunner.gnm1.ann1.Z66RMF Arachis hypogaea HOM05D003658 ORTHO05D004457 5.6e-38 160.6 88 86.4
Haze_23933 Corylus avellana HOM05D003658 ORTHO05D004457 5.6e-38 160.6 90 86.7
FAN26G3193 Fragaria x ananassa HOM05D003658 ORTHO05D004457 5.6e-38 160.6 88 87.5
FAN28G2851 Fragaria x ananassa HOM05D003658 ORTHO05D004457 7.3e-38 160.2 88 87.5
Psat5g277200 Pisum sativum HOM05D003658 ORTHO05D004457 7.3e-38 160.2 88 86.4
arahy.Tifrunner.gnm1.ann1.1XIG7Z Arachis hypogaea HOM05D003658 ORTHO05D004457 9.5e-38 159.8 88 86.4
arahy.Tifrunner.gnm1.ann1.SY27G3 Arachis hypogaea HOM05D003658 ORTHO05D004457 9.5e-38 159.8 88 86.4
Glyma.15G045100 Glycine max HOM05D003658 ORTHO05D004457 1.2e-37 159.5 88 85.2
SMO116G0226 Selaginella moellendorffii HOM05D003658 ORTHO05D004457 1.2e-37 159.5 88 85.2
Ca_01436_v3 Cicer arietinum L. HOM05D003658 ORTHO05D004457 1.6e-37 159.1 88 85.2
Peaxi162Scf00072g00510 Petunia axillaris HOM05D003658 ORTHO05D004457 1.6e-37 159.1 93 81.7
Sabra10G0015500 Salix brachista HOM05D003658 ORTHO05D004457 2.1e-37 158.7 88 87.5
Lj4A607T48 Lonicera japonica HOM05D003658 ORTHO05D004457 2.8e-37 158.3 98 79.6
Lalb_Chr22g0350161 Lupinus albus HOM05D003658 ORTHO05D004457 2.8e-37 158.3 88 85.2
Nitab4.5_0000106g0020 Nicotiana tabacum HOM05D003658 ORTHO05D004457 3.6e-37 157.9 106 74.5
unitig_8.g4304 Utricularia gibba HOM05D003658 ORTHO05D004457 4.7e-37 157.5 88 81.8
Nitab4.5_0000816g0110 Nicotiana tabacum HOM05D003658 ORTHO05D004457 1.1e-36 156.4 88 85.2
ClCG09G021680 Citrullus lanatus HOM05D003658 ORTHO05D004457 1.4e-36 156.0 88 86.4
Lsat_1_v5_gn_9_7920 Lactuca sativa HOM05D003658 ORTHO05D004457 3.1e-36 154.8 88 85.2
Nitab4.5_0010336g0040 Nicotiana tabacum HOM05D003658 ORTHO05D004457 3.1e-36 154.8 88 84.1
Nitab4.5_0010960g0010 Nicotiana tabacum HOM05D003658 ORTHO05D004457 1.2e-35 152.9 88 84.1
SalBow6G4004 Salvia bowleyana HOM05D003658 ORTHO05D004457 1.2e-35 152.9 79 88.6
SHI06033 Sapria himalayana HOM05D003658 ORTHO05D004457 3.4e-35 151.4 88 81.8
CBR_g16075 Chara braunii HOM05D003658 ORTHO05D004457 4.9e-34 147.5 88 80.7
vmacro14471 Vaccinium macrocarpon HOM05D003658 ORTHO05D004457 7.0e-33 143.7 152 53.3
Rhsim01G0220800 Rhododendron simsii HOM05D003658 ORTHO05D004457 1.6e-32 142.5 146 54.1
arahy.Tifrunner.gnm1.ann1.YNZQ4S Arachis hypogaea HOM05D003658 ORTHO05D004457 1.7e-31 139.0 77 84.4
Dinv32798 Davidia involucrata HOM05D003658 ORTHO05D004457 5.1e-31 137.5 70 88.6
MCO07G210 Micromonas commoda HOM05D003658 ORTHO05D004457 1.6e-29 132.5 78 80.8
PRCOL_00001523 Prasinoderma coloniale HOM05D003658 ORTHO05D004457 5.2e-28 127.5 77 79.2
Cre08.g358580 Chlamydomonas reinhardtii HOM05D003658 ORTHO05D004457 2.9e-26 121.7 78 74.4
Dinv14501 Davidia involucrata HOM05D003658 ORTHO05D004457 3.7e-26 121.3 63 87.3
Peaxi162Scf00809g00417 Petunia axillaris HOM05D003658 ORTHO05D004457 4.6e-24 114.4 66 77.3
Actinidia07110 Actinidia chinensis HOM05D003658 ORTHO05D004457 2.3e-23 112.1 90 70.0
Haze_26994 Corylus avellana HOM05D003658 ORTHO05D004457 2.5e-22 108.6 77 71.4
Sc12g0005820 Simmondsia chinensis HOM05D003658 ORTHO05D004457 6.2e-21 104.0 66 71.2
Cfa022738 Carpinus fangiana HOM05D003658 ORTHO05D004457 2.1e-16 89.0 86 48.8
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 8.7e-15 83.6 73 54.8
Haze_26134 Corylus avellana HOM05D003658 ORTHO05D004457 1.9e-09 65.9 77 41.6
Cc01_g11620 Coffea canephora HOM05D003658 ORTHO05D004457 1.6e-08 62.8 57 56.1
Nn2g10669 Nelumbo nucifera HOM05D003658 ORTHO05D004457 5.6e-06 54.3 30 83.3
CAN.G1001.10 Capsicum annuum HOM05D003658 ORTHO05D004457 7.3e-06 53.9 26 96.2
Cfa011369 Carpinus fangiana HOM05D003658 ORTHO05D004457 7.3e-06 53.9 26 96.2


User provided reference genes

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