Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G1757 Trochodendron aralioides HOM05D000728 ORTHO05D001586 6.6e-66 253.8 123 100.0
TAR365G0137 Trochodendron aralioides HOM05D000728 ORTHO05D001586 3.9e-34 148.3 122 63.9
Dinv16394 Davidia involucrata HOM05D000728 ORTHO05D001586 1.2e-30 136.7 125 56.0
Dinv34666 Davidia involucrata HOM05D000728 ORTHO05D001586 3.4e-30 135.2 122 54.9
Haze_24694 Corylus avellana HOM05D000728 ORTHO05D001586 3.3e-25 118.6 123 54.5
Manes.12G036100 Manihot esculenta HOM05D000728 ORTHO05D001586 4.3e-25 118.2 122 49.2
Nn1g02947 Nelumbo nucifera HOM05D000728 ORTHO05D001586 7.4e-25 117.5 122 52.5
Hma1.2p1_0273F.1_g109260 Hydrangea macrophylla HOM05D000728 ORTHO05D001586 9.7e-25 117.1 105 58.1
Nn3g19763 Nelumbo nucifera HOM05D000728 ORTHO05D001586 9.7e-25 117.1 122 54.1
ClCG06G001460 Citrullus lanatus HOM05D000728 ORTHO05D001586 1.6e-24 116.3 116 54.3
Lj1C73G4 Lonicera japonica HOM05D000728 ORTHO05D001586 1.1e-23 113.6 118 53.4
CSS0031500 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 3.1e-23 112.1 116 50.0
CsaV3_6G007420 Cucumis sativus L. HOM05D000728 ORTHO05D001586 6.9e-23 110.9 116 52.6
Actinidia30132 Actinidia chinensis HOM05D000728 ORTHO05D001586 1.2e-22 110.2 116 50.9
MBI10_g30715_MAGBIO Magnolia biondii HOM05D000728 ORTHO05D001586 1.5e-22 109.8 108 53.7
MELO3C022387.2 Cucumis melo HOM05D000728 ORTHO05D001586 3.4e-22 108.6 116 51.7
CDE08G0750 Ceratophyllum demersum HOM05D000728 ORTHO05D001586 4.5e-22 108.2 116 51.7
Aqoxy2G03743 Aquilegia oxysepala HOM05D000728 ORTHO05D001586 1.0e-21 107.1 78 61.5
Actinidia09520 Actinidia chinensis HOM05D000728 ORTHO05D001586 1.7e-21 106.3 115 47.8
Prupe.8G216300 Prunus persica HOM05D000728 ORTHO05D001586 1.7e-21 106.3 117 49.6
Hma1.2p1_1702F.1_g298300 Hydrangea macrophylla HOM05D000728 ORTHO05D001586 2.9e-21 105.5 69 72.5
ATR0787G208 Amborella trichopoda HOM05D000728 ORTHO05D001586 6.5e-21 104.4 112 50.9
PSO063G6429 Papaver somniferum HOM05D000728 ORTHO05D001586 2.5e-20 102.4 122 45.9
Sed0005606 Sechium edule HOM05D000728 ORTHO05D001586 4.2e-20 101.7 116 49.1
Cpa.g.sc87.19 Carica papaya HOM05D000728 ORTHO05D001586 7.2e-20 100.9 121 43.8
Nitab4.5_0003342g0010 Nicotiana tabacum HOM05D000728 ORTHO05D001586 1.2e-19 100.1 115 44.3
PGR044G1458 Punica granatum HOM05D000728 ORTHO05D001586 1.2e-19 100.1 118 43.2
DCAR_012580 Daucus carota HOM05D000728 ORTHO05D001586 3.6e-19 98.6 118 41.5
Nitab4.5_0002538g0040 Nicotiana tabacum HOM05D000728 ORTHO05D001586 3.6e-19 98.6 116 45.7
Sed0009313 Sechium edule HOM05D000728 ORTHO05D001586 7.9e-19 97.4 120 47.5
Sabra02G0195800 Salix brachista HOM05D000728 ORTHO05D001586 1.0e-18 97.1 88 53.4
Migut.N02227 Erythranthe guttata HOM05D000728 ORTHO05D001586 2.3e-18 95.9 121 39.7
Nitab4.5_0000845g0130 Nicotiana tabacum HOM05D000728 ORTHO05D001586 2.3e-18 95.9 116 44.0
Cc01_g17870 Coffea canephora HOM05D000728 ORTHO05D001586 3.9e-18 95.1 88 47.7
Sopen06g035170 Solanum pennellii HOM05D000728 ORTHO05D001586 5.1e-18 94.7 116 43.1
CAN.G1487.2 Capsicum annuum HOM05D000728 ORTHO05D001586 6.7e-18 94.4 116 44.0
Potri.014G192500 Populus trichocarpa HOM05D000728 ORTHO05D001586 8.8e-18 94.0 79 57.0
TWI12G1257 Tripterygium wilfordii HOM05D000728 ORTHO05D001586 8.8e-18 94.0 82 56.1
vmacro14800 Vaccinium macrocarpon HOM05D000728 ORTHO05D001586 8.8e-18 94.0 94 44.7
Dinv02909 Davidia involucrata HOM05D000728 ORTHO05D001586 1.1e-17 93.6 122 46.7
Nitab4.5_0003167g0090 Nicotiana tabacum HOM05D000728 ORTHO05D001586 1.1e-17 93.6 121 46.3
TWI18G0707 Tripterygium wilfordii HOM05D000728 ORTHO05D001586 1.5e-17 93.2 116 44.8
Solyc06g083760.3 Solanum lycopersicum HOM05D000728 ORTHO05D001586 1.9e-17 92.8 116 42.2
arahy.Tifrunner.gnm1.ann1.6R0DDZ Arachis hypogaea HOM05D000728 ORTHO05D001586 3.3e-17 92.0 117 46.2
Ciclev10018896m.g Citrus clementina HOM05D000728 ORTHO05D001586 3.3e-17 92.0 116 43.1
PSO801G0367 Papaver somniferum HOM05D000728 ORTHO05D001586 3.3e-17 92.0 123 40.7
Aqoxy5G00153 Aquilegia oxysepala HOM05D000728 ORTHO05D001586 4.3e-17 91.7 84 56.0
Rhsim01G0261000 Rhododendron simsii HOM05D000728 ORTHO05D001586 5.7e-17 91.3 83 48.2
Lj2C1143T10 Lonicera japonica HOM05D000728 ORTHO05D001586 7.4e-17 90.9 123 43.1
Lj5g0023081 Lotus japonicus HOM05D000728 ORTHO05D001586 9.7e-17 90.5 120 45.0
CAN.G771.39 Capsicum annuum HOM05D000728 ORTHO05D001586 2.2e-16 89.4 116 40.5
Peaxi162Scf00517g00031 Petunia axillaris HOM05D000728 ORTHO05D001586 2.2e-16 89.4 54 72.2
Cfa014776 Carpinus fangiana HOM05D000728 ORTHO05D001586 2.8e-16 89.0 121 46.3
PGR004G1360 Punica granatum HOM05D000728 ORTHO05D001586 2.8e-16 89.0 124 43.5
Peaxi162Scf01157g00110 Petunia axillaris HOM05D000728 ORTHO05D001586 3.7e-16 88.6 112 44.6
Duzib211G0287 Durio zibethinus HOM05D000728 ORTHO05D001586 6.3e-16 87.8 105 44.8
PSO832G2412 Papaver somniferum HOM05D000728 ORTHO05D001586 1.4e-15 86.7 83 50.6
RcHm_v2.0_Chr6g0286831 Rosa chinensis HOM05D000728 ORTHO05D001586 1.4e-15 86.7 127 40.9
Solyc09g072890.2 Solanum lycopersicum HOM05D000728 ORTHO05D001586 1.4e-15 86.7 118 45.8
PSO339G2780 Papaver somniferum HOM05D000728 ORTHO05D001586 2.4e-15 85.9 123 40.7
FvH4_2g20650 Fragaria vesca HOM05D000728 ORTHO05D001586 5.3e-15 84.7 52 69.2
FAN20G2690 Fragaria x ananassa HOM05D000728 ORTHO05D001586 5.3e-15 84.7 52 69.2
FAN24G0471 Fragaria x ananassa HOM05D000728 ORTHO05D001586 5.3e-15 84.7 52 69.2
PSO675G3487 Papaver somniferum HOM05D000728 ORTHO05D001586 5.3e-15 84.7 74 56.8
Peaxi162Scf00043g02925 Petunia axillaris HOM05D000728 ORTHO05D001586 6.9e-15 84.3 117 41.9
PSO356G0053 Papaver somniferum HOM05D000728 ORTHO05D001586 1.2e-14 83.6 65 60.0
FAN27G1521 Fragaria x ananassa HOM05D000728 ORTHO05D001586 1.5e-14 83.2 52 67.3
Sopen09g028710 Solanum pennellii HOM05D000728 ORTHO05D001586 1.5e-14 83.2 95 48.4
PGSC0003DMG400014693 Solanum tuberosum HOM05D000728 ORTHO05D001586 1.5e-14 83.2 112 44.6
Sopen09g028690 Solanum pennellii HOM05D000728 ORTHO05D001586 2.0e-14 82.8 118 44.9
CAN.G941.29 Capsicum annuum HOM05D000728 ORTHO05D001586 2.6e-14 82.4 112 38.4
MSTRG.12519 Avicennia marina HOM05D000728 ORTHO05D001586 4.5e-14 81.6 55 65.5
Glyma.13G126600 Glycine max HOM05D000728 ORTHO05D001586 5.9e-14 81.3 118 44.1
CANSAT01G3020 Cannabis sativa HOM05D000728 ORTHO05D001586 1.7e-13 79.7 104 41.3
Ca_10022_v3 Cicer arietinum L. HOM05D000728 ORTHO05D001586 2.9e-13 79.0 53 66.0
Ca_29586_v3 Cicer arietinum L. HOM05D000728 ORTHO05D001586 2.9e-13 79.0 53 66.0
Haze_11451 Corylus avellana HOM05D000728 ORTHO05D001586 2.9e-13 79.0 56 66.1
Medtr1g069570 Medicago truncatula HOM05D000728 ORTHO05D001586 5.0e-13 78.2 58 58.6
Lalb_Chr06g0170701 Lupinus albus HOM05D000728 ORTHO05D001586 6.5e-13 77.8 58 56.9
CSS0013114 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 8.5e-13 77.4 107 43.9
Glyma.10G040100 Glycine max HOM05D000728 ORTHO05D001586 1.1e-12 77.0 58 58.6
Glyma.10G165500 Glycine max HOM05D000728 ORTHO05D001586 1.1e-12 77.0 52 63.5
Glyma.20G227500 Glycine max HOM05D000728 ORTHO05D001586 1.1e-12 77.0 52 59.6
Sc17g0002720 Simmondsia chinensis HOM05D000728 ORTHO05D001586 1.1e-12 77.0 116 38.8
Hma1.2p1_3058F.1_g332170 Hydrangea macrophylla HOM05D000728 ORTHO05D001586 1.4e-12 76.6 107 41.1
Phvul.007G189700 Phaseolus vulgaris HOM05D000728 ORTHO05D001586 1.4e-12 76.6 115 43.5
CSS0020820 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 2.5e-12 75.9 107 43.0
ECA236G2323 Erigeron canadensis HOM05D000728 ORTHO05D001586 2.5e-12 75.9 119 35.3
Gohir.A11G133200 Gossypium hirsutum HOM05D000728 ORTHO05D001586 3.2e-12 75.5 81 48.1
Gohir.D11G139300 Gossypium hirsutum HOM05D000728 ORTHO05D001586 3.2e-12 75.5 81 48.1
Gorai.007G149600 Gossypium raimondii HOM05D000728 ORTHO05D001586 3.2e-12 75.5 81 48.1
GSVIVG01028411001 Vitis vinifera HOM05D000728 ORTHO05D001586 4.2e-12 75.1 88 52.3
Lj2A44T78 Lonicera japonica HOM05D000728 ORTHO05D001586 5.5e-12 74.7 54 61.1
SHI26767 Sapria himalayana HOM05D000728 ORTHO05D001586 5.5e-12 74.7 89 39.3
VMungo0720G3037 Vigna mungo HOM05D000728 ORTHO05D001586 5.5e-12 74.7 81 48.1
Gorai.004G222200 Gossypium raimondii HOM05D000728 ORTHO05D001586 7.2e-12 74.3 84 46.4
Ca_09651_v3 Cicer arietinum L. HOM05D000728 ORTHO05D001586 9.4e-12 73.9 58 55.2
Sopen06g002990 Solanum pennellii HOM05D000728 ORTHO05D001586 9.4e-12 73.9 112 40.2
Nitab4.5_0000326g0290 Nicotiana tabacum HOM05D000728 ORTHO05D001586 1.2e-11 73.6 92 44.6
Nitab4.5_0009671g0030 Nicotiana tabacum HOM05D000728 ORTHO05D001586 1.2e-11 73.6 88 45.5
MSTRG.18349 Avicennia marina HOM05D000728 ORTHO05D001586 1.6e-11 73.2 59 54.2
THA.LOC104801129 Tarenaya hassleriana HOM05D000728 ORTHO05D001586 1.6e-11 73.2 121 37.2
CiPaw.07G073900 Carya illinoinensis HOM05D000728 ORTHO05D001586 2.1e-11 72.8 54 63.0
Solyc06g008130.4 Solanum lycopersicum HOM05D000728 ORTHO05D001586 2.1e-11 72.8 112 40.2
CSS0035527 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 2.7e-11 72.4 55 65.5
Sp2g08820 Schrenkiella parvula HOM05D000728 ORTHO05D001586 2.7e-11 72.4 125 35.2
Hund18282 Selenicereus undatus HOM05D000728 ORTHO05D001586 4.7e-11 71.6 57 54.4
Glyma.03G249800 Glycine max HOM05D000728 ORTHO05D001586 7.9e-11 70.9 93 43.0
SGA_v2.0_scaffold1G00645 Striga asiatica HOM05D000728 ORTHO05D001586 7.9e-11 70.9 94 42.6
Oeu052077.3 Olea europaea HOM05D000728 ORTHO05D001586 1.0e-10 70.5 100 48.0
TPR.G5674 Trifolium pratense HOM05D000728 ORTHO05D001586 1.0e-10 70.5 58 53.4
CSS0025855 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 1.4e-10 70.1 86 50.0
CSS0037082 Camellia sinensis var. sinensis HOM05D000728 ORTHO05D001586 1.8e-10 69.7 55 63.6
Dinv27107 Davidia involucrata HOM05D000728 ORTHO05D001586 2.3e-10 69.3 109 40.4
Migut.D00470 Erythranthe guttata HOM05D000728 ORTHO05D001586 2.3e-10 69.3 65 55.4
Thhalv10003157m.g Eutrema salsugineum HOM05D000728 ORTHO05D001586 3.0e-10 68.9 120 33.3
Psat6g062880 Pisum sativum HOM05D000728 ORTHO05D001586 3.0e-10 68.9 62 50.0
Hma1.2p1_0112F.1_g054660 Hydrangea macrophylla HOM05D000728 ORTHO05D001586 3.9e-10 68.6 139 37.4
Cc01_g17860 Coffea canephora HOM05D000728 ORTHO05D001586 5.1e-10 68.2 55 60.0
QL03p029707 Quercus lobata HOM05D000728 ORTHO05D001586 6.7e-10 67.8 54 61.1
HPP92_025830 Vanilla planifolia HOM05D000728 ORTHO05D001586 8.8e-10 67.4 54 51.9
arahy.Tifrunner.gnm1.ann1.K3KASK Arachis hypogaea HOM05D000728 ORTHO05D001586 2.0e-09 66.2 74 44.6
arahy.Tifrunner.gnm1.ann1.YP76SE Arachis hypogaea HOM05D000728 ORTHO05D001586 2.0e-09 66.2 74 44.6
Cc09_g02870 Coffea canephora HOM05D000728 ORTHO05D001586 2.0e-09 66.2 55 52.7
QL06p020826 Quercus lobata HOM05D000728 ORTHO05D001586 3.3e-09 65.5 126 36.5
C07p26560 Brassica napus HOM05D000728 ORTHO05D001586 4.4e-09 65.1 76 38.2
PSO017G3969 Papaver somniferum HOM05D000728 ORTHO05D001586 4.4e-09 65.1 51 54.9
BraA02t07852Z Brassica rapa HOM05D000728 ORTHO05D001586 5.7e-09 64.7 91 36.3
BraA06t27625Z Brassica rapa HOM05D000728 ORTHO05D001586 5.7e-09 64.7 76 38.2
MSTRG.9864 Avicennia marina HOM05D000728 ORTHO05D001586 7.4e-09 64.3 52 61.5
Actinidia39990 Actinidia chinensis HOM05D000728 ORTHO05D001586 9.7e-09 63.9 119 35.3
AUR62025454 Chenopodium quinoa HOM05D000728 ORTHO05D001586 9.7e-09 63.9 72 45.8
AUR62025455 Chenopodium quinoa HOM05D000728 ORTHO05D001586 9.7e-09 63.9 72 45.8
Peaxi162Scf00043g02919 Petunia axillaris HOM05D000728 ORTHO05D001586 9.7e-09 63.9 52 51.9
Glyma.19G247400 Glycine max HOM05D000728 ORTHO05D001586 1.3e-08 63.5 73 46.6
Os04g0692900 Oryza sativa ssp. japonica HOM05D000728 ORTHO05D001586 1.3e-08 63.5 65 47.7
EL10Ac7g17673 Beta vulgaris HOM05D000728 ORTHO05D001586 1.7e-08 63.2 96 37.5
DCAR_024288 Daucus carota HOM05D000728 ORTHO05D001586 1.7e-08 63.2 55 58.2
A02p28170 Brassica napus HOM05D000728 ORTHO05D001586 2.2e-08 62.8 90 35.6
Potri.013G048100 Populus trichocarpa HOM05D000728 ORTHO05D001586 2.2e-08 62.8 71 42.3
A06p47570 Brassica napus HOM05D000728 ORTHO05D001586 2.8e-08 62.4 58 46.6
Lj3A649G56 Lonicera japonica HOM05D000728 ORTHO05D001586 2.8e-08 62.4 121 36.4
BcaC06g34606 Brassica carinata HOM05D000728 ORTHO05D001586 3.7e-08 62.0 76 35.5
BolC7t43183H Brassica oleracea HOM05D000728 ORTHO05D001586 3.7e-08 62.0 76 35.5
BcaC03g16622 Brassica carinata HOM05D000728 ORTHO05D001586 4.8e-08 61.6 58 44.8
C02p44550 Brassica napus HOM05D000728 ORTHO05D001586 4.8e-08 61.6 58 44.8
BolC2t10499H Brassica oleracea HOM05D000728 ORTHO05D001586 4.8e-08 61.6 58 44.8
HanXRQChr10g0280661 Helianthus annuus HOM05D000728 ORTHO05D001586 4.8e-08 61.6 58 43.1
Nitab4.5_0002751g0030 Nicotiana tabacum HOM05D000728 ORTHO05D001586 4.8e-08 61.6 120 37.5
AL8G16110 Arabidopsis lyrata HOM05D000728 ORTHO05D001586 6.3e-08 61.2 83 34.9
AT5G43990 Arabidopsis thaliana HOM05D000728 ORTHO05D001586 8.2e-08 60.8 52 50.0
AUR62008788 Chenopodium quinoa HOM05D000728 ORTHO05D001586 1.1e-07 60.5 67 46.3
HanXRQChr15g0468241 Helianthus annuus HOM05D000728 ORTHO05D001586 1.1e-07 60.5 58 46.6
AL2G20430 Arabidopsis lyrata HOM05D000728 ORTHO05D001586 1.4e-07 60.1 52 48.1
BcaB07g30548 Brassica carinata HOM05D000728 ORTHO05D001586 1.4e-07 60.1 58 43.1
Lsat_1_v5_gn_9_11421 Lactuca sativa HOM05D000728 ORTHO05D001586 1.8e-07 59.7 57 45.6
Sabra13G0044100 Salix brachista HOM05D000728 ORTHO05D001586 1.8e-07 59.7 55 47.3
AUR62000625 Chenopodium quinoa HOM05D000728 ORTHO05D001586 2.4e-07 59.3 120 35.8
Lj5g0022094 Lotus japonicus HOM05D000728 ORTHO05D001586 2.4e-07 59.3 49 57.1
Carub.0008s0456 Capsella rubella HOM05D000728 ORTHO05D001586 3.1e-07 58.9 52 48.1
GSVIVG01027907001 Vitis vinifera HOM05D000728 ORTHO05D001586 3.1e-07 58.9 55 54.5
Os02g0621100 Oryza sativa ssp. japonica HOM05D000728 ORTHO05D001586 7.0e-07 57.8 68 38.2
Zm00001eb175610 Zea mays HOM05D000728 ORTHO05D001586 7.0e-07 57.8 73 42.5
AT1G04050 Arabidopsis thaliana HOM05D000728 ORTHO05D001586 1.2e-06 57.0 58 46.6
Peaxi162Scf00033g03023 Petunia axillaris HOM05D000728 ORTHO05D001586 1.2e-06 57.0 56 53.6
BcaC06g31665 Brassica carinata HOM05D000728 ORTHO05D001586 1.5e-06 56.6 103 31.1
Aa31LG5G3280 Aethionema arabicum HOM05D000728 ORTHO05D001586 2.0e-06 56.2 78 34.6
PSO339G3977 Papaver somniferum HOM05D000728 ORTHO05D001586 2.0e-06 56.2 59 44.1
ATR0736G166 Amborella trichopoda HOM05D000728 ORTHO05D001586 2.6e-06 55.8 62 48.4
AUR62006978 Chenopodium quinoa HOM05D000728 ORTHO05D001586 2.6e-06 55.8 74 41.9
Zm00001eb076530 Zea mays HOM05D000728 ORTHO05D001586 2.6e-06 55.8 51 45.1
Ah.08g218230 Amaranthus hybridus HOM05D000728 ORTHO05D001586 4.5e-06 55.1 120 32.5
Ciclev10030747m.g Citrus clementina HOM05D000728 ORTHO05D001586 4.5e-06 55.1 54 51.9
Sabra09G0107300 Salix brachista HOM05D000728 ORTHO05D001586 4.5e-06 55.1 55 52.7
CDE05G1476 Ceratophyllum demersum HOM05D000728 ORTHO05D001586 5.9e-06 54.7 52 46.2
SGA_v2.0_scaffold67G22698 Striga asiatica HOM05D000728 ORTHO05D001586 5.9e-06 54.7 75 34.7
Carub.0001s0321 Capsella rubella HOM05D000728 ORTHO05D001586 7.7e-06 54.3 62 41.9
Migut.O00088 Erythranthe guttata HOM05D000728 ORTHO05D001586 7.7e-06 54.3 54 51.9
Lsat_1_v5_gn_8_92080 Lactuca sativa HOM05D000728 ORTHO05D001586 7.7e-06 54.3 52 48.1
Phvul.006G104500 Phaseolus vulgaris HOM05D000728 ORTHO05D001586 7.7e-06 54.3 56 50.0
Potri.009G138600 Populus trichocarpa HOM05D000728 ORTHO05D001586 7.7e-06 54.3 55 52.7


User provided reference genes

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