Gene: Lsat_1_v5_gn_8_92080

General Information

Structural Information

Species Lactuca sativa
Gene Identifier Lsat_1_v5_gn_8_92080
Transcript Identifier Lsat_1_v5_gn_8_92080.2
Gene Type Coding gene
Location Lsat_1_v8_lg_8 : 132962674-132966376 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000728
#Genes/#Species 799/100
Phylogenetic origin

ID ORTHO05D001586
#Genes/#Species 385/98
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Lsat_1_v5_gn_8_92080.v5
pacid 38949904

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0034968	IEA	InterPro	histone lysine methylation
GO:0080188	ISO	PLAZA Integrative Orthology	gene silencing by RNA-directed DNA methylation	AT5G43990
GO:0006412	ISO	PLAZA Homology (enrichment)	translation	HOM05D000728

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0018024	IEA	InterPro	histone-lysine N-methyltransferase activity
GO:0042802	ISO	PLAZA Integrative Orthology	identical protein binding	AT1G04050
GO:0003735	ISO	PLAZA Homology (enrichment)	structural constituent of ribosome	HOM05D000728

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IEA	InterPro	nucleus
GO:0005694	ISO	PLAZA Integrative Orthology	chromosome	AT5G43990
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT5G43990
GO:0005840	ISO	PLAZA Homology (enrichment)	ribosome	HOM05D000728

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001214	SET domain
IPR007728	Pre-SET domain

Mapman id	Description
12.3.3.6	Chromatin organisation.post-translational histone modification.histone lysine methylation.class-V histone methyltransferase (Suvar)