Gene: Sopen09g028710

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen09g028710
  • Transcript Identifier Sopen09g028710.1
  • Gene Type Coding gene
  • Location Spenn-ch09 : 76911735-76926824 : negative

Gene Family Information

  • ID HOM05D000728
  • #Genes/#Species 799/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen09g028710.1

Descriptions

  • Description Encodes SUVR1, one of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. Localized to the nucleolus, maybe involved in regulation of rRNA expression. | homolog of SU(var)3-9 1 (SUVR1) | FUNCTIONS IN: zinc ion binding, histone-lysine N-methyltransferase activity | INVOLVED IN: chromatin modification | LOCATED IN: nucleolus | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: SET domain , WIYLD domain , Pre-SET zinc-binding sub-group , Pre-SET domain | BEST Arabidopsis thaliana protein match is: SET-domain containing protein lysine methyltransferase family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034968
IEA
InterProhistone lysine methylation
GO:0080188
ISO
PLAZA Integrative Orthologygene silencing by RNA-directed DNA methylation AT5G43990
GO:0006412
ISO
PLAZA Homology (enrichment)translation HOM05D000728

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0018024
IEA
InterProhistone-lysine N-methyltransferase activity
GO:0008270
IEA
InterProzinc ion binding
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT1G04050
GO:0003735
ISO
PLAZA Homology (enrichment)structural constituent of ribosome HOM05D000728

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G04380
GO:0005694
ISO
PLAZA Integrative Orthologychromosome AT5G43990
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G43990
GO:0005840
ISO
PLAZA Homology (enrichment)ribosome HOM05D000728

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001214 SET domain
IPR018848 WIYLD domain
IPR043017 WIYLD domain superfamily
IPR007728 Pre-SET domain
Mapman id Description
12.3.3.6 Chromatin organisation.post-translational histone modification.histone lysine methylation.class-V histone methyltransferase (Suvar)