Gene: Nitab4.5_0003167g0090
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0003167g0090
- Transcript Identifier Nitab4.5_0003167g0090.1
- Gene Type Coding gene
- Location Nitab4.5_0003167 : 290550-297372 : positive
Gene Family Information
- ID HOM05D000728
- #Genes/#Species 799/100
- Phylogenetic origin
- ID ORTHO05D001586
- #Genes/#Species 385/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Nitab4.5_0003167g0090.1
- SR1-identifier Nta12g01380.1
Descriptions
- Description Pre-SET domain, SET domain, Pre-SET zinc-binding sub-group, WIYLD domain, Histone-lysine N-methyltransferase SUVR1/2/4
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0034968 | IEA | InterPro | histone lysine methylation | |
| GO:0080188 | ISO | PLAZA Integrative Orthology | gene silencing by RNA-directed DNA methylation | AT5G43990 |
| GO:0006412 | ISO | PLAZA Homology (enrichment) | translation | HOM05D000728 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0018024 | IEA | InterPro | histone-lysine N-methyltransferase activity | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT1G04050 |
| GO:0003735 | ISO | PLAZA Homology (enrichment) | structural constituent of ribosome | HOM05D000728 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G04380 |
| GO:0005694 | ISO | PLAZA Integrative Orthology | chromosome | AT5G43990 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G43990 |
| GO:0005840 | ISO | PLAZA Homology (enrichment) | ribosome | HOM05D000728 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.3.3.6 | Chromatin organisation.post-translational histone modification.histone lysine methylation.class-V histone methyltransferase (Suvar) |