Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR633G0970 Trochodendron aralioides HOM05D006016 ORTHO05D007553 8.9e-304 1046.2 550 100.0
GSVIVG01011095001 Vitis vinifera HOM05D006016 ORTHO05D007553 8.8e-118 428.3 317 77.6
Cfa006104 Carpinus fangiana HOM05D006016 ORTHO05D007553 1.3e-113 414.5 305 77.0
Haze_04746 Corylus avellana HOM05D006016 ORTHO05D007553 2.9e-113 413.3 308 76.6
Nn1g02145 Nelumbo nucifera HOM05D006016 ORTHO05D007553 1.9e-112 410.6 249 86.3
PGR044G1280 Punica granatum HOM05D006016 ORTHO05D007553 9.4e-112 408.3 249 86.7
Hma1.2p1_0628F.1_g191900 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 2.7e-111 406.8 248 89.1
Cpa.g.sc485.5 Carica papaya HOM05D006016 ORTHO05D007553 2.3e-110 403.7 249 86.7
QL12p022630 Quercus lobata HOM05D006016 ORTHO05D007553 6.7e-110 402.1 249 87.6
Oeu011169.1 Olea europaea HOM05D006016 ORTHO05D007553 2.6e-109 400.2 249 81.9
Aqoxy2G03243 Aquilegia oxysepala HOM05D006016 ORTHO05D007553 4.4e-109 399.4 249 80.7
Prupe.8G244900 Prunus persica HOM05D006016 ORTHO05D007553 1.3e-108 397.9 249 84.7
Manes.01G210000 Manihot esculenta HOM05D006016 ORTHO05D007553 1.7e-108 397.5 249 83.9
Duzib138G0992 Durio zibethinus HOM05D006016 ORTHO05D007553 3.7e-108 396.4 311 73.3
Thecc.01G283800 Theobroma cacao HOM05D006016 ORTHO05D007553 3.7e-108 396.4 249 86.3
CANSAT80G0718 Cannabis sativa HOM05D006016 ORTHO05D007553 1.1e-107 394.8 246 85.8
MD11G1289700 Malus domestica HOM05D006016 ORTHO05D007553 1.1e-107 394.8 249 85.1
CiPaw.07G094500 Carya illinoinensis HOM05D006016 ORTHO05D007553 1.8e-107 394.0 249 86.3
MD03G1268900 Malus domestica HOM05D006016 ORTHO05D007553 2.0e-106 390.6 249 84.3
Potri.014G138500 Populus trichocarpa HOM05D006016 ORTHO05D007553 2.6e-106 390.2 249 79.5
Gohir.A08G069800 Gossypium hirsutum HOM05D006016 ORTHO05D007553 7.7e-106 388.7 315 71.4
Eucgr.K03393 Eucalyptus grandis HOM05D006016 ORTHO05D007553 1.3e-105 387.9 249 85.5
Eucgr.K03395 Eucalyptus grandis HOM05D006016 ORTHO05D007553 1.7e-105 387.5 249 85.1
CSS0041846 Camellia sinensis var. sinensis HOM05D006016 ORTHO05D007553 2.2e-105 387.1 249 82.7
Ciclev10020923m.g Citrus clementina HOM05D006016 ORTHO05D007553 2.2e-105 387.1 314 72.3
MSTRG.18215 Avicennia marina HOM05D006016 ORTHO05D007553 3.8e-105 386.3 249 82.3
PSO170G1401 Papaver somniferum HOM05D006016 ORTHO05D007553 5.0e-105 386.0 250 78.4
PSO407G0301 Papaver somniferum HOM05D006016 ORTHO05D007553 5.0e-105 386.0 250 78.4
Nitab4.5_0006180g0080 Nicotiana tabacum HOM05D006016 ORTHO05D007553 6.5e-105 385.6 250 81.2
Hund06953 Selenicereus undatus HOM05D006016 ORTHO05D007553 6.5e-105 385.6 249 83.1
DCAR_002754 Daucus carota HOM05D006016 ORTHO05D007553 8.5e-105 385.2 249 82.7
SGA_v2.0_scaffold1G00448 Striga asiatica HOM05D006016 ORTHO05D007553 1.1e-104 384.8 249 81.9
Atru.chr5.1361 Acer truncatum HOM05D006016 ORTHO05D007553 1.9e-104 384.0 249 83.5
Nitab4.5_0007392g0030 Nicotiana tabacum HOM05D006016 ORTHO05D007553 1.9e-104 384.0 250 79.6
ClCG07G000070 Citrullus lanatus HOM05D006016 ORTHO05D007553 2.5e-104 383.6 253 83.8
EL10Ac4g09090 Beta vulgaris HOM05D006016 ORTHO05D007553 3.2e-104 383.3 248 77.8
RcHm_v2.0_Chr1g0321311 Rosa chinensis HOM05D006016 ORTHO05D007553 3.2e-104 383.3 249 82.3
COL.COLO4_09142 Corchorus olitorius HOM05D006016 ORTHO05D007553 7.2e-104 382.1 250 81.6
FvH4_7g02610 Fragaria vesca HOM05D006016 ORTHO05D007553 9.4e-104 381.7 249 81.9
Solyc09g064790.3 Solanum lycopersicum HOM05D006016 ORTHO05D007553 1.2e-103 381.3 250 83.2
Sopen09g026490 Solanum pennellii HOM05D006016 ORTHO05D007553 1.6e-103 380.9 250 83.2
AUR62032753 Chenopodium quinoa HOM05D006016 ORTHO05D007553 2.1e-103 380.6 248 77.4
PGSC0003DMG400000944 Solanum tuberosum HOM05D006016 ORTHO05D007553 2.1e-103 380.6 250 82.8
FAN03G2867 Fragaria x ananassa HOM05D006016 ORTHO05D007553 3.6e-103 379.8 249 81.5
Gorai.004G083400 Gossypium raimondii HOM05D006016 ORTHO05D007553 3.6e-103 379.8 323 70.6
AUR62004906 Chenopodium quinoa HOM05D006016 ORTHO05D007553 8.0e-103 378.6 249 76.7
Sed0013000 Sechium edule HOM05D006016 ORTHO05D007553 3.9e-102 376.3 251 82.9
MELO3C014346.2 Cucumis melo HOM05D006016 ORTHO05D007553 5.2e-102 375.9 253 80.6
Sc05g0005010 Simmondsia chinensis HOM05D006016 ORTHO05D007553 8.8e-102 375.2 249 80.3
CAN.G962.6 Capsicum annuum HOM05D006016 ORTHO05D007553 2.6e-101 373.6 248 81.0
Migut.D00263 Erythranthe guttata HOM05D006016 ORTHO05D007553 4.4e-101 372.9 246 77.6
Ca_09774_v3 Cicer arietinum L. HOM05D006016 ORTHO05D007553 1.3e-100 371.3 253 80.6
CDE01G0302 Ceratophyllum demersum HOM05D006016 ORTHO05D007553 3.7e-100 369.8 249 77.5
Cc02_g34480 Coffea canephora HOM05D006016 ORTHO05D007553 6.3e-100 369.0 251 79.7
ATR0626G088 Amborella trichopoda HOM05D006016 ORTHO05D007553 1.4e-99 367.9 249 77.9
Glyma.10G024400 Glycine max HOM05D006016 ORTHO05D007553 1.4e-99 367.9 306 66.3
Medtr1g072640 Medicago truncatula HOM05D006016 ORTHO05D007553 1.8e-99 367.5 253 80.2
Peaxi162Scf00104g00220 Petunia axillaris HOM05D006016 ORTHO05D007553 1.2e-98 364.8 250 76.4
CARHR124900 Cardamine hirsuta HOM05D006016 ORTHO05D007553 1.6e-98 364.4 251 77.3
Carub.0004s3083 Capsella rubella HOM05D006016 ORTHO05D007553 3.5e-98 363.2 253 76.3
FAN01G1545 Fragaria x ananassa HOM05D006016 ORTHO05D007553 7.7e-98 362.1 243 79.8
Thhalv10001558m.g Eutrema salsugineum HOM05D006016 ORTHO05D007553 1.7e-97 360.9 253 76.7
TPR.G1544 Trifolium pratense HOM05D000563 ORTHO05D000536 2.9e-97 360.1 251 80.5
BcaB02g08738 Brassica carinata HOM05D006016 ORTHO05D007553 2.5e-96 357.1 249 77.1
arahy.Tifrunner.gnm1.ann1.NXI6YJ Arachis hypogaea HOM05D006016 ORTHO05D007553 3.2e-96 356.7 252 75.4
Lj2C1178T3 Lonicera japonica HOM05D006016 ORTHO05D007553 5.5e-96 355.9 225 81.3
arahy.Tifrunner.gnm1.ann1.Q6PPUG Arachis hypogaea HOM05D006016 ORTHO05D007553 7.2e-96 355.5 252 74.2
THA.LOC104823056 Tarenaya hassleriana HOM05D006016 ORTHO05D007553 9.4e-96 355.1 250 78.0
Sp4g30040 Schrenkiella parvula HOM05D006016 ORTHO05D007553 2.7e-95 353.6 253 75.9
BraA05t18997Z Brassica rapa HOM05D006016 ORTHO05D007553 3.6e-95 353.2 250 76.8
Lj5g0023557 Lotus japonicus HOM05D006016 ORTHO05D007553 4.7e-95 352.8 226 81.9
Lalb_Chr21g0306561 Lupinus albus HOM05D006016 ORTHO05D007553 6.1e-95 352.4 252 77.8
AL4G47720 Arabidopsis lyrata HOM05D006016 ORTHO05D007553 8.0e-95 352.1 253 75.9
HPP92_025128 Vanilla planifolia HOM05D006016 ORTHO05D007553 6.7e-94 349.0 249 73.5
Aa31LG4G3290 Aethionema arabicum HOM05D006016 ORTHO05D007553 1.5e-93 347.8 253 72.3
CsaV3_6G036870 Cucumis sativus L. HOM05D006016 ORTHO05D007553 1.5e-93 347.8 253 75.9
AT2G48120 Arabidopsis thaliana HOM05D006016 ORTHO05D007553 6.3e-92 342.4 228 75.9
HanXRQChr01g0002401 Helianthus annuus HOM05D006016 ORTHO05D007553 1.8e-91 340.9 250 70.0
Lsat_1_v5_gn_5_187441 Lactuca sativa HOM05D006016 ORTHO05D007553 4.1e-91 339.7 323 59.8
SalBow4G2498 Salvia bowleyana HOM05D006016 ORTHO05D007553 5.3e-91 339.3 239 74.1
A05p00010 Brassica napus HOM05D006016 ORTHO05D007553 1.2e-90 338.2 241 76.8
Phvul.007G169400 Phaseolus vulgaris HOM05D006016 ORTHO05D007553 1.2e-90 338.2 252 76.2
TWI14G0073 Tripterygium wilfordii HOM05D006016 ORTHO05D007553 1.6e-90 337.8 321 62.9
BolC4t21679H Brassica oleracea HOM05D006016 ORTHO05D007553 2.0e-90 337.4 269 71.0
BolSC55t61222H Brassica oleracea HOM05D006016 ORTHO05D007553 2.7e-90 337.0 269 68.8
BolSC55t61226H Brassica oleracea HOM05D006016 ORTHO05D007553 5.9e-90 335.9 269 70.6
Rhsim01G0276200 Rhododendron simsii HOM05D006016 ORTHO05D007553 1.7e-89 334.3 341 57.5
BNapus_Darmor_BZH_scaffold_188p00120 Brassica napus HOM05D006016 ORTHO05D007553 1.9e-88 330.9 225 75.6
BNapus_Darmor_BZH_scaffold_188p00130 Brassica napus HOM05D006016 ORTHO05D007553 1.9e-88 330.9 225 75.6
unitig_61.g26325 Utricularia gibba HOM05D006016 ORTHO05D007553 2.5e-88 330.5 250 70.4
arahy.Tifrunner.gnm1.ann1.95RMVD Arachis hypogaea HOM05D006016 ORTHO05D007553 4.2e-88 329.7 241 72.2
Psat6g138080 Pisum sativum HOM05D006016 ORTHO05D007553 1.2e-87 328.2 228 77.2
Os05g0393400 Oryza sativa ssp. japonica HOM05D006016 ORTHO05D007553 8.0e-87 325.5 249 66.3
Sabra14G0104500 Salix brachista HOM05D006016 ORTHO05D007553 8.0e-87 325.5 248 69.0
ECA248G0902 Erigeron canadensis HOM05D006016 ORTHO05D007553 1.8e-86 324.3 232 72.8
Zm00001eb287380 Zea mays HOM05D006016 ORTHO05D007553 1.2e-85 321.6 249 66.3
Dinv32962 Davidia involucrata HOM05D006016 ORTHO05D007553 3.4e-85 320.1 185 87.6
BcaC02g12797 Brassica carinata HOM05D006016 ORTHO05D007553 1.3e-84 318.2 250 72.4
Gohir.D08G079100 Gossypium hirsutum HOM05D006016 ORTHO05D007553 8.0e-79 298.9 318 61.0
Hma1.2p1_0628F.1_g191890 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 1.5e-77 294.7 237 74.3
vmacro14936 Vaccinium macrocarpon HOM05D006016 ORTHO05D007553 6.3e-76 289.3 185 79.5
BcaC02g12566 Brassica carinata HOM05D006016 ORTHO05D007553 7.8e-74 282.3 251 66.9
QL10p008835 Quercus lobata HOM05D006016 ORTHO05D007553 4.7e-71 273.1 163 90.2
SEGI_37912 Sequoiadendron giganteum HOM05D006016 ORTHO05D007553 4.0e-70 270.0 249 61.4
Actinidia21099 Actinidia chinensis HOM05D006016 ORTHO05D007553 1.3e-68 265.0 260 60.0
arahy.Tifrunner.gnm1.ann1.9IJ3BZ Arachis hypogaea HOM05D006016 ORTHO05D007553 2.2e-68 264.2 250 60.8
SMO360G0019 Selaginella moellendorffii HOM05D006016 ORTHO05D007553 9.5e-64 248.8 251 53.8
BolSC55t61219H Brassica oleracea HOM05D006016 ORTHO05D007553 6.8e-62 242.7 158 82.9
Mapoly0059s0024 Marchantia polymorpha HOM05D006016 ORTHO05D007553 1.3e-57 228.4 220 55.5
Pp3c5_15510 Physcomitrium patens HOM05D006016 ORTHO05D007553 1.7e-57 228.0 249 53.8
BolSC55t61223H Brassica oleracea HOM05D006016 ORTHO05D007553 5.1e-57 226.5 156 79.5
Lj9C654T2 Lonicera japonica HOM05D006016 ORTHO05D007553 4.9e-44 183.3 170 57.6
AagrBONN_evm.TU.Sc2ySwM_228.5509 Anthoceros agrestis HOM05D006016 ORTHO05D007553 7.8e-42 176.0 169 49.7
BraA05t18995Z Brassica rapa HOM05D006016 ORTHO05D007553 6.6e-41 172.9 128 67.2
Glyma.02G149402 Glycine max HOM05D006016 ORTHO05D007553 4.3e-40 170.2 116 81.9
BNapus_Darmor_BZH_scaffold_188p00100 Brassica napus HOM05D006016 ORTHO05D007553 1.5e-37 161.8 125 65.6
Oeu001432.1 Olea europaea HOM05D006016 ORTHO05D007553 2.1e-31 141.4 98 74.5
QL09p051040 Quercus lobata HOM05D006016 ORTHO05D007553 2.2e-28 131.3 119 61.3
BNapus_Darmor_BZH_scaffold_188p00090 Brassica napus HOM05D001484 ORTHO05D007553 1.3e-25 122.1 88 83.0
CBR_g23747 Chara braunii HOM05D006016 ORTHO05D007553 2.3e-25 121.3 222 36.5
Actinidia24878 Actinidia chinensis HOM05D006016 ORTHO05D007553 4.3e-24 117.1 128 53.9
AUR62004907 Chenopodium quinoa HOM05D006016 ORTHO05D007553 8.1e-23 112.8 78 75.6
QL09p050526 Quercus lobata HOM05D006016 ORTHO05D337571 2.2e-20 104.8 101 57.4
BcaC08g43234 Brassica carinata HOM05D006016 ORTHO05D007553 4.3e-16 90.5 68 60.3
MBI04_g32261_MAGBIO Magnolia biondii HOM05D006016 ORTHO05D007553 3.7e-15 87.4 72 65.3
Dinv13370 Davidia involucrata HOM05D006016 ORTHO05D007553 5.5e-11 73.6 65 64.6
QL09p050966 Quercus lobata HOM05D001484 ORTHO05D001564 1.8e-09 68.6 34 79.4
Dinv16891 Davidia involucrata HOM05D006016 ORTHO05D007553 3.9e-09 67.4 73 60.3
Dinv01676 Davidia involucrata HOM05D006016 ORTHO05D007553 8.7e-09 66.2 66 59.1
BolC6t35694H Brassica oleracea HOM05D006016 ORTHO05D007553 6.3e-07 60.1 46 71.7
Lj9C654T3 Lonicera japonica HOM05D006016 ORTHO05D007553 1.4e-06 58.9 46 73.9


User provided reference genes

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