Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G1859 Trochodendron aralioides HOM05D004663 ORTHO05D006325 8.5e-182 640.2 319 100.0
TAR628G1419 Trochodendron aralioides HOM05D004663 ORTHO05D006325 1.9e-149 532.7 309 88.3
Nn4g24912 Nelumbo nucifera HOM05D004663 ORTHO05D006325 9.8e-138 493.8 329 76.3
Atru.chr11.1191 Acer truncatum HOM05D004663 ORTHO05D006325 1.0e-126 457.2 325 71.4
Atru.chr11.1197 Acer truncatum HOM05D004663 ORTHO05D006325 1.0e-126 457.2 325 71.4
TWI74G1669 Tripterygium wilfordii HOM05D004663 ORTHO05D006325 4.3e-125 451.8 324 70.4
PSO017G2988 Papaver somniferum HOM05D004663 ORTHO05D006325 1.4e-123 446.8 323 68.7
GSVIVG01010186001 Vitis vinifera HOM05D004663 ORTHO05D006325 3.1e-123 445.7 328 69.8
Hma1.2p1_0499F.1_g166870 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 6.8e-123 444.5 348 66.4
PSO675G5757 Papaver somniferum HOM05D004663 ORTHO05D006325 8.9e-123 444.1 322 68.3
Thecc.02G295300 Theobroma cacao HOM05D004663 ORTHO05D006325 1.5e-122 443.4 328 69.2
HPP92_022410 Vanilla planifolia HOM05D004663 ORTHO05D006325 4.9e-121 438.3 325 67.7
Potri.010G169600 Populus trichocarpa HOM05D004663 ORTHO05D006325 1.2e-119 433.7 322 68.3
Manes.03G082300 Manihot esculenta HOM05D004663 ORTHO05D006325 1.6e-119 433.3 324 67.6
Prupe.1G344500 Prunus persica HOM05D004663 ORTHO05D006325 4.6e-119 431.8 327 68.5
arahy.Tifrunner.gnm1.ann1.W91FXI Arachis hypogaea HOM05D004663 ORTHO05D006325 1.3e-118 430.3 321 67.3
Hund24313 Selenicereus undatus HOM05D004663 ORTHO05D006325 2.3e-118 429.5 337 66.2
CSS0001950 Camellia sinensis var. sinensis HOM05D004663 ORTHO05D006325 1.9e-117 426.4 343 65.6
arahy.Tifrunner.gnm1.ann1.NK7YGL Arachis hypogaea HOM05D004663 ORTHO05D006325 2.5e-117 426.0 321 67.0
MD16G1006100 Malus domestica HOM05D004663 ORTHO05D006325 4.3e-117 425.2 324 68.2
Ah.01g013090 Amaranthus hybridus HOM05D004663 ORTHO05D006325 1.3e-116 423.7 326 66.6
Lj3g0017139 Lotus japonicus HOM05D004663 ORTHO05D006325 1.3e-116 423.7 325 67.1
Cc11_g05100 Coffea canephora HOM05D004663 ORTHO05D006325 1.6e-116 423.3 342 65.2
Eucgr.J00843 Eucalyptus grandis HOM05D004663 ORTHO05D006325 3.6e-116 422.2 335 66.6
PGSC0003DMG400019834 Solanum tuberosum HOM05D004663 ORTHO05D006325 3.6e-116 422.2 326 64.7
Duzib251G0299 Durio zibethinus HOM05D004663 ORTHO05D006325 4.8e-116 421.8 329 67.2
HanXRQChr13g0390021 Helianthus annuus HOM05D004663 ORTHO05D006325 1.8e-115 419.9 342 61.4
EL10Ac9g22902 Beta vulgaris HOM05D004663 ORTHO05D006325 2.4e-115 419.5 295 69.5
Migut.L00857 Erythranthe guttata HOM05D004663 ORTHO05D006325 3.1e-115 419.1 326 67.5
Gohir.D12G156000 Gossypium hirsutum HOM05D004663 ORTHO05D006325 3.1e-115 419.1 323 66.6
CAN.G1846.2 Capsicum annuum HOM05D004663 ORTHO05D006325 5.3e-115 418.3 326 65.0
ECA233G5178 Erigeron canadensis HOM05D004663 ORTHO05D006325 5.3e-115 418.3 346 63.6
Gorai.008G168600 Gossypium raimondii HOM05D004663 ORTHO05D006325 6.9e-115 417.9 323 66.3
RcHm_v2.0_Chr4g0446361 Rosa chinensis HOM05D004663 ORTHO05D006325 6.9e-115 417.9 327 67.3
HanXRQChr13g0388091 Helianthus annuus HOM05D004663 ORTHO05D006325 9.0e-115 417.5 342 62.0
Glyma.12G028400 Glycine max HOM05D004663 ORTHO05D006325 1.5e-114 416.8 324 66.4
Sc10g0005860 Simmondsia chinensis HOM05D004663 ORTHO05D006325 1.5e-114 416.8 323 65.9
FvH4_4g36650 Fragaria vesca HOM05D004663 ORTHO05D006325 2.6e-114 416.0 323 65.9
Solyc02g021060.4 Solanum lycopersicum HOM05D004663 ORTHO05D006325 3.4e-114 415.6 326 64.1
Sopen02g005340 Solanum pennellii HOM05D004663 ORTHO05D006325 3.4e-114 415.6 326 64.1
CiPaw.06G057700 Carya illinoinensis HOM05D004663 ORTHO05D006325 4.4e-114 415.2 333 62.5
COL.COLO4_16617 Corchorus olitorius HOM05D004663 ORTHO05D006325 5.8e-114 414.8 367 59.9
TPR.G21555 Trifolium pratense HOM05D004663 ORTHO05D006325 7.6e-114 414.5 325 66.5
CDE05G3445 Ceratophyllum demersum HOM05D004663 ORTHO05D006325 2.2e-113 412.9 323 65.9
Haze_11737 Corylus avellana HOM05D004663 ORTHO05D006325 2.2e-113 412.9 348 61.5
FAN12G1833 Fragaria x ananassa HOM05D004663 ORTHO05D006325 2.9e-113 412.5 323 65.3
Medtr4g074330 Medicago truncatula HOM05D004663 ORTHO05D006325 2.9e-113 412.5 324 65.7
Lsat_1_v5_gn_8_32481 Lactuca sativa HOM05D004663 ORTHO05D006325 6.4e-113 411.4 342 62.3
ClCG11G001190 Citrullus lanatus HOM05D004663 ORTHO05D006325 1.4e-112 410.2 322 65.8
Ca_03037_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 7.1e-112 407.9 300 69.3
Psat7g174040 Pisum sativum HOM05D004663 ORTHO05D006325 7.1e-112 407.9 326 65.6
PGR142G1504 Punica granatum HOM05D004663 ORTHO05D006325 9.3e-112 407.5 323 64.4
THA.LOC104820417 Tarenaya hassleriana HOM05D004663 ORTHO05D006325 1.2e-111 407.1 336 62.8
CsaV3_5G013250 Cucumis sativus L. HOM05D004663 ORTHO05D006325 3.5e-111 405.6 322 64.6
Rhsim05G0224300 Rhododendron simsii HOM05D004663 ORTHO05D006325 3.5e-111 405.6 334 61.7
AUR62012865 Chenopodium quinoa HOM05D004663 ORTHO05D006325 4.6e-111 405.2 337 64.1
Actinidia13293 Actinidia chinensis HOM05D004663 ORTHO05D006325 1.0e-110 404.1 348 60.6
AL3G31940 Arabidopsis lyrata HOM05D004663 ORTHO05D006325 1.0e-110 404.1 337 62.9
AT3G18630 Arabidopsis thaliana HOM05D004663 ORTHO05D006325 5.1e-110 401.7 339 63.1
AUR62017645 Chenopodium quinoa HOM05D004663 ORTHO05D006325 5.1e-110 401.7 345 62.9
Aa31LG8G5480 Aethionema arabicum HOM05D004663 ORTHO05D006325 8.7e-110 401.0 329 62.9
ATR0618G342 Amborella trichopoda HOM05D004663 ORTHO05D006325 1.1e-109 400.6 302 67.2
Sed0002621 Sechium edule HOM05D004663 ORTHO05D006325 5.6e-109 398.3 323 64.1
Carub.0003s1841 Capsella rubella HOM05D004663 ORTHO05D006325 3.6e-108 395.6 339 62.2
CARHR094010 Cardamine hirsuta HOM05D004663 ORTHO05D006325 3.6e-108 395.6 337 61.1
Sp3g16700 Schrenkiella parvula HOM05D004663 ORTHO05D006325 1.1e-107 394.0 336 61.3
VMungo1127G1383 Vigna mungo HOM05D004663 ORTHO05D006325 1.8e-107 393.3 351 59.5
Thhalv10021116m.g Eutrema salsugineum HOM05D004663 ORTHO05D006325 4.0e-107 392.1 336 60.4
CANSAT35G0206 Cannabis sativa HOM05D004663 ORTHO05D006325 5.3e-107 391.7 319 62.4
BcaB06g25915 Brassica carinata HOM05D004663 ORTHO05D006325 9.0e-107 391.0 327 61.5
Zm00001eb066560 Zea mays HOM05D004663 ORTHO05D006325 9.0e-107 391.0 320 61.2
BcaC05g28590 Brassica carinata HOM05D004663 ORTHO05D006325 3.4e-106 389.0 332 60.5
C05p46970 Brassica napus HOM05D004663 ORTHO05D006325 3.4e-106 389.0 332 60.5
BolC5t33426H Brassica oleracea HOM05D004663 ORTHO05D006325 3.4e-106 389.0 332 60.5
DCAR_026912 Daucus carota HOM05D004663 ORTHO05D006325 4.5e-106 388.7 342 58.8
Lalb_Chr03g0024891 Lupinus albus HOM05D004663 ORTHO05D006325 4.5e-106 388.7 323 63.5
Gohir.A12G152600 Gossypium hirsutum HOM05D004663 ORTHO05D006325 9.9e-106 387.5 300 66.7
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 1.7e-105 386.7 308 64.6
SEGI_04236 Sequoiadendron giganteum HOM05D004663 ORTHO05D006325 2.2e-105 386.3 272 66.9
A05p30980 Brassica napus HOM05D004663 ORTHO05D006325 2.9e-105 386.0 330 61.8
BraA05t21940Z Brassica rapa HOM05D004663 ORTHO05D006325 6.4e-105 384.8 332 61.4
Nitab4.5_0002192g0110 Nicotiana tabacum HOM05D004663 ORTHO05D006325 1.1e-104 384.0 318 62.6
Peaxi162Scf00818g00118 Petunia axillaris HOM05D004663 ORTHO05D006325 1.4e-104 383.6 305 63.3
Nitab4.5_0004043g0010 Nicotiana tabacum HOM05D004663 ORTHO05D006325 1.9e-104 383.3 317 62.5
BcaC09g48820 Brassica carinata HOM05D004663 ORTHO05D006325 6.0e-103 378.3 325 59.7
C01p45610 Brassica napus HOM05D004663 ORTHO05D006325 6.0e-103 378.3 325 59.7
BolC1t04522H Brassica oleracea HOM05D004663 ORTHO05D006325 6.0e-103 378.3 325 59.7
FAN07G1521 Fragaria x ananassa HOM05D004663 ORTHO05D006325 5.1e-102 375.2 299 65.2
Phvul.011G031800 Phaseolus vulgaris HOM05D004663 ORTHO05D006325 7.4e-101 371.3 299 64.5
Os04g0673400 Oryza sativa ssp. japonica HOM05D004663 ORTHO05D006325 8.1e-100 367.9 251 68.9
SGA_v2.0_scaffold258G45746 Striga asiatica HOM05D004663 ORTHO05D006325 3.1e-99 365.9 290 64.1
Pp3c14_15380 Physcomitrium patens HOM05D004663 ORTHO05D006325 4.0e-99 365.5 364 52.7
MSTRG.8079 Avicennia marina HOM05D004663 ORTHO05D006325 1.2e-98 364.0 302 64.2
Duzib128G0407 Durio zibethinus HOM05D004663 ORTHO05D006325 2.2e-97 359.8 313 61.7
AagrBONN_evm.TU.Sc2ySwM_344.3482 Anthoceros agrestis HOM05D004663 ORTHO05D006325 1.4e-96 357.1 271 62.7
SMO361G0720 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 1.4e-96 357.1 286 58.4
A01p35830 Brassica napus HOM05D004663 ORTHO05D006325 5.5e-96 355.1 325 58.2
HPP92_027507 Vanilla planifolia HOM05D004663 ORTHO05D006325 9.3e-96 354.4 223 74.4
Mapoly0028s0106 Marchantia polymorpha HOM05D004663 ORTHO05D006325 1.6e-95 353.6 274 61.7
BraA01t03662Z Brassica rapa HOM05D004663 ORTHO05D006325 4.6e-95 352.1 323 57.3
Hma1.2p1_0499F.1_g166860 Hydrangea macrophylla HOM05D004663 ORTHO05D006325 4.6e-95 352.1 298 63.4
Dinv11709 Davidia involucrata HOM05D004663 ORTHO05D006325 2.1e-92 343.2 295 63.7
Medtr4g074300 Medicago truncatula HOM05D004663 ORTHO05D006325 3.7e-92 342.4 288 58.7
SalBow2G2230 Salvia bowleyana HOM05D004663 ORTHO05D006325 2.0e-90 336.7 218 71.6
Lj3C851G4 Lonicera japonica HOM05D005588 ORTHO05D006615 1.3e-89 334.0 216 74.1
Sabra10G0129400 Salix brachista HOM05D004663 ORTHO05D006325 2.9e-89 332.8 271 65.3
SHI04172 Sapria himalayana HOM05D004663 ORTHO05D006325 2.3e-86 323.2 378 49.5
MELO3C026796.2 Cucumis melo HOM05D004663 ORTHO05D006325 3.0e-86 322.8 274 62.4
SMO361G0033 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 3.2e-80 302.8 259 55.6
MBI03_g05116_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 3.0e-78 296.2 215 71.6
Oeu044073.1 Olea europaea HOM05D000222 ORTHO05D004962 5.1e-78 295.4 320 53.1
SMO087G0003 Selaginella moellendorffii HOM05D004663 ORTHO05D006325 5.1e-78 295.4 259 55.6
Medtr4g074280 Medicago truncatula HOM05D004663 ORTHO05D006325 1.1e-77 294.3 285 51.6
CBR_g10874 Chara braunii HOM05D004663 ORTHO05D006325 3.3e-77 292.7 234 58.5
MCO16G090 Micromonas commoda HOM05D004663 ORTHO05D006325 1.3e-73 280.8 231 56.7
Cpa.g.sc0.166 Carica papaya HOM05D004663 ORTHO05D006325 7.9e-71 271.6 224 63.8
Ciclev10006661m.g Citrus clementina HOM05D004663 ORTHO05D006325 5.5e-64 248.8 219 60.7
unitig_22.g6361 Utricularia gibba HOM05D004663 ORTHO05D006325 1.7e-60 237.3 178 65.7
Cre17.g746347 Chlamydomonas reinhardtii HOM05D004663 ORTHO05D006325 2.8e-60 236.5 295 44.4
Ca_29479_v3 Cicer arietinum L. HOM05D004663 ORTHO05D006325 1.0e-57 228.0 221 51.6
Lj9C88T6 Lonicera japonica HOM05D004663 ORTHO05D006325 2.7e-50 203.4 238 47.9
PRCOL_00002421 Prasinoderma coloniale HOM05D001829 ORTHO05D007093 9.4e-48 194.9 189 49.7
Haze_26212 Corylus avellana HOM05D004663 ORTHO05D006325 1.2e-47 194.5 226 45.6
MD03G1100100 Malus domestica HOM05D004663 ORTHO05D006325 7.5e-45 185.3 108 79.6
Lju1225A1T39 Lonicera japonica HOM05D004663 ORTHO05D006325 3.7e-44 183.0 199 48.7
arahy.Tifrunner.gnm1.ann1.AZJV2P Arachis hypogaea HOM05D004663 ORTHO05D006325 1.6e-42 177.6 109 75.2
Pp3c9_12680 Physcomitrium patens HOM05D004663 ORTHO05D012250 4.9e-36 156.0 203 42.4
Glyma.11G103600 Glycine max HOM05D004663 ORTHO05D006325 2.4e-35 153.7 97 79.4
Pp3c15_19430 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.2e-34 151.4 203 41.9
MBI03_g05117_MAGBIO Magnolia biondii HOM05D004663 ORTHO05D006325 1.6e-34 151.0 80 85.0
Pp3c16_12590 Physcomitrium patens HOM05D004663 ORTHO05D006325 6.6e-33 145.6 203 39.9
Glyma.08G121000 Glycine max HOM05D004663 ORTHO05D006325 8.6e-33 145.2 106 65.1
Pp3c16_10730 Physcomitrium patens HOM05D004663 ORTHO05D006325 1.5e-32 144.4 203 40.4
Lju1225C2G8 Lonicera japonica HOM05D004663 ORTHO05D006325 2.8e-31 140.2 97 70.1
Pp3c16_6060 Physcomitrium patens HOM05D004663 ORTHO05D012250 2.0e-29 134.0 203 37.4
arahy.Tifrunner.gnm1.ann1.A394HF Arachis hypogaea HOM05D004663 ORTHO05D006325 4.4e-29 132.9 77 80.5
Pp3c10_11550 Physcomitrium patens HOM05D004663 ORTHO05D006325 6.4e-28 129.0 203 35.5
Pp3c14_4000 Physcomitrium patens HOM05D004663 ORTHO05D012250 1.9e-27 127.5 249 30.5
Pp3s67_100 Physcomitrium patens HOM05D004663 ORTHO05D006325 2.4e-27 127.1 190 37.4
Pp3c14_3990 Physcomitrium patens HOM05D004663 ORTHO05D006325 2.0e-26 124.0 199 34.2
Medtr4g077140 Medicago truncatula HOM05D004663 ORTHO05D006325 7.8e-26 122.1 84 66.7
Lalb_Chr01g0001561 Lupinus albus HOM05D004663 ORTHO05D006325 1.2e-21 108.2 170 41.2
Pp3c11_15750 Physcomitrium patens HOM05D004663 ORTHO05D006325 2.9e-20 103.6 204 31.4
Pp3c1_10590 Physcomitrium patens HOM05D004663 ORTHO05D006325 2.9e-20 103.6 202 32.2
CBR_g4801 Chara braunii HOM05D004663 ORTHO05D134352 2.5e-16 90.5 262 30.2
Pp3c8_4630 Physcomitrium patens HOM05D004663 ORTHO05D311796 1.2e-15 88.2 186 29.6
Pp3c1_280 Physcomitrium patens HOM05D004663 ORTHO05D006325 4.7e-15 86.3 203 28.6
Pp3c6_15710 Physcomitrium patens HOM05D004663 ORTHO05D313664 4.4e-13 79.7 203 27.6
Medtr3g063510 Medicago truncatula HOM05D004663 ORTHO05D006325 4.6e-10 69.7 57 56.1
Medtr4g074270 Medicago truncatula HOM05D004663 ORTHO05D006325 5.1e-09 66.2 67 49.3
AUR62002800 Chenopodium quinoa HOM05D004663 ORTHO05D006325 2.5e-08 63.9 34 79.4
Pp3c4_1950 Physcomitrium patens HOM05D004663 ORTHO05D318537 2.1e-07 60.8 61 49.2
AT2G10550 Arabidopsis thaliana HOM05D004663 ORTHO05D006325 3.1e-06 57.0 134 32.1
Pp3c9_17820 Physcomitrium patens HOM05D004663 ORTHO05D318098 6.8e-06 55.8 78 38.5


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