Gene: Sopen02g005340

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g005340
  • Transcript Identifier Sopen02g005340.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 14757629-14774333 : negative

Gene Family Information

  • ID HOM05D004663
  • #Genes/#Species 156/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g005340.1

Descriptions

  • Description Encodes a uracil-DNA glycosylase (UDG) involved in a base excision DNA repair pathway in mitochondria. | uracil dna glycosylase (UNG) | FUNCTIONS IN: uracil DNA N-glycosylase activity | INVOLVED IN: DNA repair, base-excision repair | LOCATED IN: mitochondrion | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: Uracil-DNA glycosylase , Uracil-DNA glycosylase-like | BEST Arabidopsis thaliana protein match is: unknown protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0006284
IEA
InterProbase-excision repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004844
IEA
InterProuracil DNA N-glycosylase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G18630

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036895 Uracil-DNA glycosylase-like domain superfamily
IPR002043 Uracil-DNA glycosylase family 1
IPR005122 Uracil-DNA glycosylase-like
Mapman id Description
14.5.9 DNA damage response.base excision repair (BER).uracil repair DNA glycosylase (UNG)