Gene: Pp3c9_12680

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c9_12680
  • Transcript Identifier Pp3c9_12680V3.1
  • Gene Type Coding gene
  • Location Chr09 : 8510138-8512158 : positive

Gene Family Information

  • ID HOM05D004663
  • #Genes/#Species 156/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c9_12680V3.1
  • pacid 32913079
  • uniprot A0A2K1K2Z2

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0097510
IBA
GOA Databasebase-excision repair, AP site formation via deaminated base removal
GO:0006351
IEA
GOA Databasetranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006284
IEA
GOA Databasebase-excision repair
GO:0006284
IEA
InterProbase-excision repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004844
IBA
IEA
GOA Databaseuracil DNA N-glycosylase activity
GO:0004844
IEA
InterProuracil DNA N-glycosylase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003899
IEA
GOA DatabaseDNA-directed 5'-3' RNA polymerase activity
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005739
IBA
IEA
GOA Databasemitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036895 Uracil-DNA glycosylase-like domain superfamily
IPR007081 RNA polymerase Rpb1, domain 5
IPR005122 Uracil-DNA glycosylase-like
IPR002043 Uracil-DNA glycosylase family 1
IPR007066 RNA polymerase Rpb1, domain 3
IPR000722 RNA polymerase, alpha subunit
Mapman id Description
14.5.9 DNA damage response.base excision repair (BER).uracil repair DNA glycosylase (UNG)