Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0499 Trochodendron aralioides HOM05D000228 ORTHO05D005112 1.3e-27 125.6 61 100.0
TAR636G3355 Trochodendron aralioides HOM05D000228 ORTHO05D005112 1.9e-21 105.1 63 82.5
Nn7g37022 Nelumbo nucifera HOM05D000228 ORTHO05D005112 2.3e-19 98.2 63 69.8
MD12G1066600 Malus domestica HOM05D000228 ORTHO05D005112 3.0e-19 97.8 64 75.0
PSO339G5840 Papaver somniferum HOM05D000228 ORTHO05D005112 3.0e-19 97.8 62 74.2
PSO384G0893 Papaver somniferum HOM05D000228 ORTHO05D005112 3.0e-19 97.8 62 74.2
CiPaw.09G034800 Carya illinoinensis HOM05D000228 ORTHO05D005112 3.9e-19 97.4 64 76.6
FvH4_6g23210 Fragaria vesca HOM05D000228 ORTHO05D005112 1.9e-18 95.1 64 75.0
FAN14G5358 Fragaria x ananassa HOM05D000228 ORTHO05D005112 1.9e-18 95.1 64 75.0
Aqoxy1G00159 Aquilegia oxysepala HOM05D000228 ORTHO05D005112 5.7e-18 93.6 63 71.4
FvH4_5g35030 Fragaria vesca HOM05D000228 ORTHO05D005112 5.7e-18 93.6 64 73.4
RcHm_v2.0_Chr3g0481021 Rosa chinensis HOM05D000228 ORTHO05D005112 7.4e-18 93.2 64 73.4
FAN02G2218 Fragaria x ananassa HOM05D000228 ORTHO05D005112 9.7e-18 92.8 64 73.4
FAN05G0345 Fragaria x ananassa HOM05D000228 ORTHO05D005112 9.7e-18 92.8 64 73.4
FAN09G2168 Fragaria x ananassa HOM05D000228 ORTHO05D005112 9.7e-18 92.8 64 73.4
FvH4_5g34330 Fragaria vesca HOM05D000228 ORTHO05D005112 2.2e-17 91.7 64 71.9
Sed0022055 Sechium edule HOM05D000228 ORTHO05D005112 2.2e-17 91.7 64 70.3
ClCG10G017230 Citrullus lanatus HOM05D000228 ORTHO05D005112 2.8e-17 91.3 64 70.3
TPR.G28490 Trifolium pratense HOM05D000228 ORTHO05D005112 3.7e-17 90.9 63 69.8
Lalb_Chr16g0380371 Lupinus albus HOM05D000228 ORTHO05D005112 4.8e-17 90.5 64 71.9
Manes.09G029200 Manihot esculenta HOM05D000228 ORTHO05D005112 4.8e-17 90.5 59 74.6
Phvul.007G255400 Phaseolus vulgaris HOM05D000228 ORTHO05D005112 4.8e-17 90.5 64 71.9
ECA247G1984 Erigeron canadensis HOM05D000228 ORTHO05D005112 6.3e-17 90.1 63 68.3
Dinv36249 Davidia involucrata HOM05D000228 ORTHO05D005112 8.2e-17 89.7 64 71.9
Eucgr.K01811 Eucalyptus grandis HOM05D000228 ORTHO05D005112 1.1e-16 89.4 64 68.8
Duzib128G0079 Durio zibethinus HOM05D000228 ORTHO05D005112 1.4e-16 89.0 59 74.6
Lj5g0016256 Lotus japonicus HOM05D000228 ORTHO05D005112 1.4e-16 89.0 64 70.3
Lalb_Chr09g0325001 Lupinus albus HOM05D000228 ORTHO05D005112 1.4e-16 89.0 64 70.3
VMungo0720G2008 Vigna mungo HOM05D000228 ORTHO05D005112 1.4e-16 89.0 64 70.3
Haze_19911 Corylus avellana HOM05D000228 ORTHO05D005112 1.8e-16 88.6 64 71.9
Glyma.10G095200 Glycine max HOM05D000228 ORTHO05D005112 1.8e-16 88.6 64 70.3
Thecc.05G162700 Theobroma cacao HOM05D000228 ORTHO05D005112 1.8e-16 88.6 59 74.6
PGR042G3811 Punica granatum HOM05D000228 ORTHO05D005112 2.4e-16 88.2 59 71.2
CANSAT80G1181 Cannabis sativa HOM05D000228 ORTHO05D005112 3.1e-16 87.8 64 70.3
Cfa016860 Carpinus fangiana HOM05D000228 ORTHO05D005112 4.1e-16 87.4 64 70.3
MSTRG.931 Avicennia marina HOM05D000228 ORTHO05D005112 5.3e-16 87.0 64 70.3
GSVIVG01033327001 Vitis vinifera HOM05D000228 ORTHO05D005112 5.3e-16 87.0 64 70.3
Medtr4g086290 Medicago truncatula HOM05D000228 ORTHO05D005112 6.9e-16 86.7 63 66.7
Potri.006G055300 Populus trichocarpa HOM05D000228 ORTHO05D005112 6.9e-16 86.7 59 69.5
Prupe.7G067700 Prunus persica HOM05D000228 ORTHO05D005112 6.9e-16 86.7 64 65.6
Glyma.02G181200 Glycine max HOM05D000228 ORTHO05D005112 9.0e-16 86.3 64 68.8
Cpa.g.sc92.5 Carica papaya HOM05D000228 ORTHO05D005112 1.2e-15 85.9 59 71.2
MELO3C009661.2 Cucumis melo HOM05D000228 ORTHO05D005112 1.5e-15 85.5 59 66.1
Oeu033168.1 Olea europaea HOM05D000228 ORTHO05D005112 1.5e-15 85.5 64 70.3
Sabra06G0039200 Salix brachista HOM05D000228 ORTHO05D005112 1.5e-15 85.5 59 69.5
TWI75G0708 Tripterygium wilfordii HOM05D000228 ORTHO05D005112 2.6e-15 84.7 64 68.8
CSS0039942 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D005112 5.9e-15 83.6 64 68.8
COL.COLO4_28678 Corchorus olitorius HOM05D000228 ORTHO05D005112 5.9e-15 83.6 59 69.5
Sopen10g030910 Solanum pennellii HOM05D000228 ORTHO05D005112 5.9e-15 83.6 64 67.2
Lsat_1_v5_gn_9_27541 Lactuca sativa HOM05D000228 ORTHO05D005112 7.7e-15 83.2 64 65.6
QL05p021274 Quercus lobata HOM05D000228 ORTHO05D005112 7.7e-15 83.2 64 68.8
Actinidia09359 Actinidia chinensis HOM05D000228 ORTHO05D005112 1.3e-14 82.4 64 70.3
CsaV3_3G039160 Cucumis sativus L. HOM05D000228 ORTHO05D005112 1.3e-14 82.4 51 68.6
HanXRQChr10g0290381 Helianthus annuus HOM05D000228 ORTHO05D005112 1.3e-14 82.4 64 64.1
Rhsim03G0012300 Rhododendron simsii HOM05D000228 ORTHO05D005112 1.3e-14 82.4 64 67.2
CAN.G128.23 Capsicum annuum HOM05D000228 ORTHO05D005112 1.7e-14 82.0 64 67.2
Gohir.A02G107000 Gossypium hirsutum HOM05D000228 ORTHO05D005112 1.7e-14 82.0 64 67.2
Oeu004018.1 Olea europaea HOM05D000228 ORTHO05D005112 1.7e-14 82.0 64 65.6
Oeu004019.1 Olea europaea HOM05D000228 ORTHO05D005112 1.7e-14 82.0 64 65.6
Solyc10g080350.3 Solanum lycopersicum HOM05D000228 ORTHO05D005112 1.7e-14 82.0 64 65.6
Ca_25862_v3 Cicer arietinum L. HOM05D000228 ORTHO05D005112 2.2e-14 81.6 64 65.6
Ca_27020_v3 Cicer arietinum L. HOM05D000228 ORTHO05D005112 2.2e-14 81.6 64 65.6
Ciclev10004132m.g Citrus clementina HOM05D000228 ORTHO05D005112 2.2e-14 81.6 59 66.1
Peaxi162Scf03258g00019 Petunia axillaris HOM05D000228 ORTHO05D005112 2.2e-14 81.6 63 68.3
Cc06_g16580 Coffea canephora HOM05D000228 ORTHO05D005112 3.8e-14 80.9 64 65.6
DCAR_020471 Daucus carota HOM05D000228 ORTHO05D005112 3.8e-14 80.9 64 64.1
SalBow6G4505 Salvia bowleyana HOM05D000228 ORTHO05D005112 3.8e-14 80.9 64 67.2
arahy.Tifrunner.gnm1.ann1.02EG99 Arachis hypogaea HOM05D000228 ORTHO05D005112 6.5e-14 80.1 59 67.8
arahy.Tifrunner.gnm1.ann1.7V0RSZ Arachis hypogaea HOM05D000228 ORTHO05D005112 6.5e-14 80.1 59 67.8
arahy.Tifrunner.gnm1.ann1.BY74GT Arachis hypogaea HOM05D000228 ORTHO05D005112 6.5e-14 80.1 59 67.8
arahy.Tifrunner.gnm1.ann1.L2VW3R Arachis hypogaea HOM05D000228 ORTHO05D005112 6.5e-14 80.1 59 67.8
Gohir.D03G070500 Gossypium hirsutum HOM05D000228 ORTHO05D005112 6.5e-14 80.1 64 65.6
Gorai.003G089300 Gossypium raimondii HOM05D000228 ORTHO05D005112 6.5e-14 80.1 64 65.6
vmacro20114 Vaccinium macrocarpon HOM05D000228 ORTHO05D005112 6.5e-14 80.1 64 65.6
Migut.J01785 Erythranthe guttata HOM05D000228 ORTHO05D005112 8.5e-14 79.7 64 64.1
SHI27541 Sapria himalayana HOM05D000228 ORTHO05D005112 8.5e-14 79.7 64 60.9
SGA_v2.0_scaffold105G30449 Striga asiatica HOM05D000228 ORTHO05D005112 4.2e-13 77.4 64 60.9
CARHR167900 Cardamine hirsuta HOM05D000228 ORTHO05D005112 5.5e-13 77.0 59 64.4
SGA_v2.0_scaffold522G52702 Striga asiatica HOM05D000228 ORTHO05D005112 5.5e-13 77.0 54 66.7
THA.LOC104818848 Tarenaya hassleriana HOM05D000228 ORTHO05D005112 5.5e-13 77.0 59 59.3
AUR62043125 Chenopodium quinoa HOM05D000228 ORTHO05D005112 7.2e-13 76.6 56 64.3
Aa31sc1187G20 Aethionema arabicum HOM05D000228 ORTHO05D005112 9.4e-13 76.3 59 62.7
Aa31sc992G30 Aethionema arabicum HOM05D000228 ORTHO05D005112 9.4e-13 76.3 59 62.7
Lj7A597G62 Lonicera japonica HOM05D000228 ORTHO05D005112 9.4e-13 76.3 64 64.1
Sc20g0005060 Simmondsia chinensis HOM05D000228 ORTHO05D005112 9.4e-13 76.3 55 69.1
AL5G39280 Arabidopsis lyrata HOM05D000228 ORTHO05D005112 1.2e-12 75.9 59 62.7
AT3G57660 Arabidopsis thaliana HOM05D000228 ORTHO05D005112 1.2e-12 75.9 59 62.7
Carub.0005s2449 Capsella rubella HOM05D000228 ORTHO05D005112 1.2e-12 75.9 59 62.7
A07p23580 Brassica napus HOM05D000228 ORTHO05D005112 1.6e-12 75.5 64 57.8
BraA07t30016Z Brassica rapa HOM05D000228 ORTHO05D005112 1.6e-12 75.5 64 57.8
AUR62039171 Chenopodium quinoa HOM05D000228 ORTHO05D005112 1.6e-12 75.5 56 62.5
Hund24743 Selenicereus undatus HOM05D000228 ORTHO05D005112 1.6e-12 75.5 59 61.0
CDE04G1016 Ceratophyllum demersum HOM05D000228 ORTHO05D005112 2.1e-12 75.1 64 57.8
BcaB02g07586 Brassica carinata HOM05D000228 ORTHO05D005112 2.7e-12 74.7 59 59.3
EL10Ac2g03322 Beta vulgaris HOM05D000228 ORTHO05D005112 4.6e-12 73.9 59 57.6
BcaC07g40356 Brassica carinata HOM05D000228 ORTHO05D005112 4.6e-12 73.9 59 59.3
A09p50510 Brassica napus HOM05D000228 ORTHO05D005112 4.6e-12 73.9 59 59.3
C08p33230 Brassica napus HOM05D000228 ORTHO05D005112 4.6e-12 73.9 59 59.3
BolC8t50924H Brassica oleracea HOM05D000228 ORTHO05D005112 4.6e-12 73.9 59 59.3
BraA09t40502Z Brassica rapa HOM05D000228 ORTHO05D005112 4.6e-12 73.9 59 59.3
Thhalv10005738m.g Eutrema salsugineum HOM05D000228 ORTHO05D005112 4.6e-12 73.9 59 59.3
Sp5g04970 Schrenkiella parvula HOM05D000228 ORTHO05D005112 4.6e-12 73.9 59 59.3
Ah.13g070900 Amaranthus hybridus HOM05D000228 ORTHO05D005112 7.9e-12 73.2 57 59.6
BcaC07g40146 Brassica carinata HOM05D000228 ORTHO05D005112 7.9e-12 73.2 59 59.3
BcaC08g44860 Brassica carinata HOM05D000228 ORTHO05D005112 1.0e-11 72.8 65 56.9
Os06g0612200 Oryza sativa ssp. japonica HOM05D000228 ORTHO05D005112 2.3e-11 71.6 55 61.8
Zm00001eb016000 Zea mays HOM05D000228 ORTHO05D005112 3.0e-11 71.2 57 59.6
AUR62032979 Chenopodium quinoa HOM05D000228 ORTHO05D005112 3.9e-11 70.9 54 57.4
unitig_32.g11071 Utricularia gibba HOM05D000228 ORTHO05D005112 3.3e-10 67.8 64 57.8
Cfa024970 Carpinus fangiana HOM05D000228 ORTHO05D005112 2.8e-09 64.7 56 53.6
EL10Ac1g00646 Beta vulgaris HOM05D000228 ORTHO05D005112 6.3e-09 63.5 55 54.5
Cre12.g529600 Chlamydomonas reinhardtii HOM05D000228 ORTHO05D005112 6.3e-09 63.5 59 45.8
SMO358G0607 Selaginella moellendorffii HOM05D000228 ORTHO05D005112 2.4e-08 61.6 62 45.2
EL10Ac1g00656 Beta vulgaris HOM05D000228 ORTHO05D005112 5.3e-08 60.5 55 52.7
AagrBONN_evm.TU.Sc2ySwM_117.4097 Anthoceros agrestis HOM05D000228 ORTHO05D005112 6.9e-08 60.1 62 50.0
ATR0605G316 Amborella trichopoda HOM05D000228 ORTHO05D005112 4.5e-07 57.4 52 51.9
Pp3c14_2730 Physcomitrium patens HOM05D000228 ORTHO05D005112 4.5e-07 57.4 62 48.4
PRCOL_00005406 Prasinoderma coloniale HOM05D000228 ORTHO05D005112 4.5e-07 57.4 55 49.1
HPP92_015356 Vanilla planifolia HOM05D000228 ORTHO05D005112 5.9e-07 57.0 64 43.8
CBR_g4028 Chara braunii HOM05D000228 ORTHO05D005112 2.2e-06 55.1 62 45.2
Mapoly0053s0083 Marchantia polymorpha HOM05D000228 ORTHO05D005112 8.5e-06 53.1 62 41.9


User provided reference genes

Program Settings