Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 3.5e-183 644.8 327 100.0
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 1.9e-136 489.6 327 78.0
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 1.8e-131 473.0 291 80.8
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 5.4e-131 471.5 291 80.1
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 5.0e-129 464.9 301 78.4
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 1.1e-128 463.8 300 79.3
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 1.9e-128 463.0 297 79.5
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 2.5e-128 462.6 301 76.7
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 2.1e-127 459.5 301 78.7
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 6.1e-127 458.0 301 76.7
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 1.4e-126 456.8 299 76.9
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 2.3e-126 456.1 305 74.8
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 4.0e-126 455.3 297 76.8
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 6.8e-126 454.5 297 76.4
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 1.2e-125 453.8 299 78.3
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 1.5e-125 453.4 297 76.8
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 7.5e-125 451.1 290 77.9
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.3e-124 450.3 302 74.2
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 2.8e-124 449.1 299 75.6
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 6.3e-124 448.0 298 75.8
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 8.3e-124 447.6 301 74.4
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 1.4e-123 446.8 297 77.1
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 4.1e-123 445.3 301 74.8
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 7.0e-123 444.5 301 74.1
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 2.3e-121 439.5 297 73.7
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 3.9e-121 438.7 297 74.1
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 6.6e-121 438.0 299 74.9
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 9.5e-120 434.1 303 72.6
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 1.6e-119 433.3 295 74.2
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 2.8e-119 432.6 302 72.8
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 2.8e-119 432.6 301 74.1
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 3.6e-119 432.2 310 73.2
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 8.0e-119 431.0 305 73.1
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 1.4e-118 430.3 300 74.0
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 1.8e-118 429.9 304 72.4
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 1.5e-117 426.8 295 73.2
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 2.6e-117 426.0 327 68.2
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 3.4e-117 425.6 295 72.9
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 5.8e-117 424.9 301 72.1
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 9.8e-117 424.1 298 72.1
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 9.8e-117 424.1 303 71.3
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.3e-116 423.7 319 69.9
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 2.2e-116 422.9 304 70.1
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 2.2e-116 422.9 298 71.8
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 2.2e-116 422.9 299 73.2
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 3.7e-116 422.2 332 66.6
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 4.9e-116 421.8 295 72.2
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 6.4e-116 421.4 303 72.9
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 6.4e-116 421.4 284 74.6
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 1.4e-115 420.2 305 71.5
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.4e-115 420.2 281 73.7
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 2.4e-115 419.5 303 70.0
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 2.4e-115 419.5 273 76.2
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 7.0e-115 417.9 304 70.4
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 7.0e-115 417.9 300 70.7
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 7.0e-115 417.9 301 71.8
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 7.0e-115 417.9 309 69.9
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 1.2e-114 417.2 306 68.6
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 1.6e-114 416.8 302 71.2
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 1.6e-114 416.8 304 70.1
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 2.0e-114 416.4 328 67.4
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 2.0e-114 416.4 328 67.7
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 2.7e-114 416.0 320 69.1
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 4.6e-114 415.2 304 70.1
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 4.6e-114 415.2 293 71.7
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 6.0e-114 414.8 304 70.1
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 7.8e-114 414.5 306 69.6
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 1.3e-113 413.7 301 70.1
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 1.7e-113 413.3 300 70.7
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 5.0e-113 411.8 320 68.1
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 8.6e-113 411.0 284 72.5
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 5.6e-112 408.3 296 70.3
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 7.3e-112 407.9 294 70.7
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 9.5e-112 407.5 292 69.5
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 2.8e-111 406.0 292 68.8
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 8.0e-111 404.4 304 66.8
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 5.2e-110 401.7 297 71.0
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 2.6e-109 399.4 259 77.2
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 3.4e-109 399.1 297 69.7
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 1.3e-108 397.1 294 69.7
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 1.9e-107 393.3 293 68.9
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 2.5e-104 382.9 297 68.4
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 5.6e-104 381.7 271 69.4
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 3.6e-103 379.0 296 64.5
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 3.5e-98 362.5 303 63.7
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 1.0e-97 360.9 270 68.9
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 1.0e-97 360.9 296 61.8
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 1.5e-96 357.1 245 75.1
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 2.5e-96 356.3 212 81.1
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 1.6e-95 353.6 250 72.0
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 1.6e-95 353.6 324 61.4
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 2.1e-95 353.2 294 64.6
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 4.7e-95 352.1 246 72.4
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 3.8e-92 342.4 211 78.7
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 5.4e-91 338.6 243 73.3
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 4.6e-90 335.5 245 71.4
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 3.9e-89 332.4 297 55.6
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 4.3e-88 328.9 307 56.7
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 3.1e-78 296.2 275 60.7
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 4.0e-78 295.8 215 72.1
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 1.2e-77 294.3 221 67.9
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 3.2e-75 286.2 250 62.0
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 1.2e-74 284.3 239 65.7
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 6.7e-73 278.5 439 43.3
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 1.1e-70 271.2 218 67.0
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 9.0e-70 268.1 149 84.6
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 1.3e-68 264.2 290 52.1
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 1.9e-67 260.4 319 46.1
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 2.5e-67 260.0 181 71.3
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 1.3e-65 254.2 221 62.9
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 5.1e-65 252.3 178 73.6
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 6.2e-63 245.4 197 67.5
CDE12G0551 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 1.7e-52 210.7 134 77.6
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 6.5e-52 208.8 174 63.8
TWI75G0111 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 7.9e-50 201.8 199 59.8
Psat5g132360 Pisum sativum HOM05D005614 ORTHO05D006759 6.3e-47 192.2 161 65.2
Psat5g132400 Pisum sativum HOM05D005614 ORTHO05D006759 3.1e-46 189.9 121 74.4
TPR.G40310 Trifolium pratense HOM05D001808 ORTHO05D001747 1.2e-45 188.0 111 77.5
Lj4A622G15 Lonicera japonica HOM05D005614 ORTHO05D006759 1.1e-43 181.4 95 93.7
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 4.8e-39 166.0 96 81.2
Haze_00458 Corylus avellana HOM05D005614 ORTHO05D006759 1.2e-37 161.4 85 87.1
Cre03.g172050 Chlamydomonas reinhardtii HOM05D005614 ORTHO05D006759 1.7e-36 157.5 285 34.7
SEGI_10746 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 5.2e-33 146.0 145 55.9
Lj4A622G16 Lonicera japonica HOM05D005614 ORTHO05D006759 5.7e-32 142.5 129 63.6
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 1.6e-29 134.4 278 33.1
Cfa025530 Carpinus fangiana HOM05D005614 ORTHO05D006759 1.0e-28 131.7 337 31.5
SMO358G0086 Selaginella moellendorffii HOM05D005614 ORTHO05D006759 1.5e-27 127.9 164 45.7
QL09p036498 Quercus lobata HOM05D005614 ORTHO05D006759 2.7e-26 123.6 70 84.3
PRCOL_00005856 Prasinoderma coloniale HOM05D005614 ORTHO05D006759 6.3e-23 112.5 133 43.6
CAN.G964.16 Capsicum annuum HOM05D005614 ORTHO05D006759 5.0e-20 102.8 108 57.4
Ca_31116_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 1.0e-17 95.1 94 58.5
RhsimUnG0102200 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.2e-13 81.6 91 52.7
Rhsim02G0185400 Rhododendron simsii HOM05D005614 ORTHO05D006759 7.7e-13 79.0 87 54.0
Cfa016005 Carpinus fangiana HOM05D005614 ORTHO05D006759 7.2e-11 72.4 57 63.2
TPR.G32 Trifolium pratense HOM05D005614 ORTHO05D006759 2.8e-10 70.5 31 87.1
Rhsim03G0117800 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.2e-08 65.1 54 59.3


User provided reference genes

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