Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G0210 Trochodendron aralioides HOM05D001537 ORTHO05D002595 2.8e-123 445.3 225 100.0
Dinv31961 Davidia involucrata HOM05D001537 ORTHO05D002595 3.5e-49 199.1 230 51.7
GSVIVG01013389001 Vitis vinifera HOM05D001537 ORTHO05D002595 1.5e-36 157.1 188 51.6
QL02p014921 Quercus lobata HOM05D001537 ORTHO05D002595 2.0e-36 156.8 254 39.4
Hma1.2p1_0612F.1_g188850 Hydrangea macrophylla HOM05D001537 ORTHO05D002595 2.6e-36 156.4 251 40.2
Actinidia17058 Actinidia chinensis HOM05D001537 ORTHO05D002595 4.5e-36 155.6 237 43.9
Potri.002G008700 Populus trichocarpa HOM05D001537 ORTHO05D002595 5.0e-35 152.1 233 45.5
Lj4A808G42 Lonicera japonica HOM05D001537 ORTHO05D002595 2.1e-33 146.7 235 43.8
Manes.18G003801 Manihot esculenta HOM05D001537 ORTHO05D002595 2.1e-33 146.7 236 41.9
Haze_22823 Corylus avellana HOM05D001537 ORTHO05D002595 4.6e-33 145.6 246 40.2
Ciclev10000045m.g Citrus clementina HOM05D001537 ORTHO05D002595 1.0e-32 144.4 228 43.9
Sabra02G0006500 Salix brachista HOM05D001537 ORTHO05D002595 1.5e-31 140.6 231 43.3
CSS0018686 Camellia sinensis var. sinensis HOM05D001537 ORTHO05D002595 1.8e-29 133.7 237 38.8
MD16G1283500 Malus domestica HOM05D001537 ORTHO05D002595 2.4e-29 133.3 226 42.0
PSO210G4823 Papaver somniferum HOM05D001537 ORTHO05D002595 1.5e-28 130.6 226 42.0
Prupe.5G009400 Prunus persica HOM05D001537 ORTHO05D002595 7.7e-28 128.3 229 40.2
Atru.chr13.115 Acer truncatum HOM05D001537 ORTHO05D002595 1.3e-27 127.5 221 42.1
Aqoxy5G01007 Aquilegia oxysepala HOM05D001537 ORTHO05D002595 3.8e-27 125.9 236 42.4
Cpa.g.sc26.169 Carica papaya HOM05D001537 ORTHO05D017787 5.0e-27 125.6 221 40.3
Thecc.08G061900 Theobroma cacao HOM05D001537 ORTHO05D002595 6.5e-27 125.2 234 38.5
MBI05_g14353_MAGBIO Magnolia biondii HOM05D001537 ORTHO05D002595 8.5e-27 124.8 235 38.7
Sc15g0004240 Simmondsia chinensis HOM05D001537 ORTHO05D002595 3.7e-22 109.4 234 35.9
Rhsim06G0005400 Rhododendron simsii HOM05D001537 ORTHO05D002595 6.3e-22 108.6 197 38.6
Nn6g31690 Nelumbo nucifera HOM05D001537 ORTHO05D002595 1.1e-21 107.8 224 39.3
COL.COLO4_07212 Corchorus olitorius HOM05D001537 ORTHO05D002595 9.1e-21 104.8 203 36.5
DCAR_022967 Daucus carota HOM05D001537 ORTHO05D002595 9.1e-21 104.8 215 34.9
THA.LOC104811474 Tarenaya hassleriana HOM05D001537 ORTHO05D002595 1.2e-20 104.4 236 35.2
FAN08G0357 Fragaria x ananassa HOM05D001537 ORTHO05D002595 3.4e-20 102.8 230 35.7
Solyc10g079510.3 Solanum lycopersicum HOM05D001537 ORTHO05D002595 3.4e-20 102.8 236 32.6
FAN13G0321 Fragaria x ananassa HOM05D001537 ORTHO05D002595 1.7e-19 100.5 230 35.2
TWI56G1355 Tripterygium wilfordii HOM05D001537 ORTHO05D002595 1.7e-19 100.5 228 35.1
Sopen10g030160 Solanum pennellii HOM05D001537 ORTHO05D002595 3.8e-19 99.4 236 32.2
MELO3C017033.2 Cucumis melo HOM05D001537 ORTHO05D002595 5.0e-19 99.0 223 34.5
CsaV3_4G037380 Cucumis sativus L. HOM05D001537 ORTHO05D002595 6.5e-19 98.6 223 35.0
Nitab4.5_0000486g0210 Nicotiana tabacum HOM05D001537 ORTHO05D002595 6.5e-19 98.6 235 31.1
Duzib093G0377 Durio zibethinus HOM05D001537 ORTHO05D002595 7.2e-18 95.1 233 35.6
FvH4_5g25570 Fragaria vesca HOM05D001537 ORTHO05D002595 1.6e-17 94.0 229 34.9
RcHm_v2.0_Chr7g0215861 Rosa chinensis HOM05D001537 ORTHO05D002595 2.1e-17 93.6 231 33.3
FAN18G0587 Fragaria x ananassa HOM05D001537 ORTHO05D002595 2.7e-17 93.2 229 35.4
Gohir.A05G178300 Gossypium hirsutum HOM05D001537 ORTHO05D002595 4.7e-17 92.4 223 34.1
Gohir.D05G181700 Gossypium hirsutum HOM05D001537 ORTHO05D002595 1.0e-16 91.3 223 34.1
Gorai.009G186700 Gossypium raimondii HOM05D001537 ORTHO05D002595 1.0e-16 91.3 223 33.6
Lalb_Chr03g0033681 Lupinus albus HOM05D001537 ORTHO05D002595 3.0e-16 89.7 225 32.9
ClCG11G018810 Citrullus lanatus HOM05D001537 ORTHO05D002595 3.9e-16 89.4 223 33.2
Sed0022111 Sechium edule HOM05D001537 ORTHO05D002595 1.1e-15 87.8 226 35.0
Nitab4.5_0004356g0020 Nicotiana tabacum HOM05D001537 ORTHO05D002595 6.3e-14 82.0 235 28.5
Cc00_g25330 Coffea canephora HOM05D001537 ORTHO05D002595 9.1e-13 78.2 236 30.1
PGR031G0149 Punica granatum HOM05D001537 ORTHO05D002595 3.5e-12 76.3 218 34.4
CANSAT25G3097 Cannabis sativa HOM05D001537 ORTHO05D002595 7.7e-12 75.1 215 35.3
TPR.G26416 Trifolium pratense HOM05D001537 ORTHO05D002595 1.7e-11 73.9 220 34.1
Ca_25241_v3 Cicer arietinum L. HOM05D001537 ORTHO05D002595 2.2e-11 73.6 175 36.6
Lj5g0001846 Lotus japonicus HOM05D001537 ORTHO05D002595 2.9e-11 73.2 229 31.0
AT1G20720 Arabidopsis thaliana HOM05D001537 ORTHO05D002595 3.8e-11 72.8 186 36.6
Oeu029250.4 Olea europaea HOM05D001537 ORTHO05D002595 5.0e-11 72.4 152 40.8
Medtr1g026490 Medicago truncatula HOM05D001537 ORTHO05D002595 8.5e-11 71.6 217 32.3
arahy.Tifrunner.gnm1.ann1.UA1BSP Arachis hypogaea HOM05D001537 ORTHO05D002595 1.1e-10 71.2 227 30.0
arahy.Tifrunner.gnm1.ann1.74ZX0A Arachis hypogaea HOM05D001537 ORTHO05D002595 1.5e-10 70.9 227 30.0
Thhalv10009302m.g Eutrema salsugineum HOM05D001537 ORTHO05D002595 3.2e-10 69.7 187 34.8
Carub.0001s2019 Capsella rubella HOM05D001537 ORTHO05D002595 4.2e-10 69.3 192 32.3
Carub.0001s2020 Capsella rubella HOM05D001537 ORTHO05D002595 1.2e-09 67.8 182 35.7
Eucgr.F03572 Eucalyptus grandis HOM05D001537 ORTHO05D002595 1.2e-09 67.8 203 30.5
AL1G33710 Arabidopsis lyrata HOM05D001537 ORTHO05D002595 2.7e-09 66.6 190 31.1
CARHR021170 Cardamine hirsuta HOM05D001537 ORTHO05D002595 3.6e-09 66.2 232 28.4
Glyma.14G223700 Glycine max HOM05D001537 ORTHO05D002595 4.7e-09 65.9 221 31.2
Ca_14546_v3 Cicer arietinum L. HOM05D001537 ORTHO05D002595 1.8e-08 63.9 141 38.3
AUR62042903 Chenopodium quinoa HOM05D001537 ORTHO05D002595 3.0e-08 63.2 224 29.0
Thhalv10006615m.g Eutrema salsugineum HOM05D001537 ORTHO05D002595 3.0e-08 63.2 192 32.8
Psat6g000440 Pisum sativum HOM05D001537 ORTHO05D002595 3.0e-08 63.2 230 32.2
Aa31LG7G4910 Aethionema arabicum HOM05D001537 ORTHO05D002595 8.8e-08 61.6 184 33.7
AT1G20750 Arabidopsis thaliana HOM05D001537 ORTHO05D002595 1.5e-07 60.8 182 31.3
EL10Ac1g01914 Beta vulgaris HOM05D001537 ORTHO05D002595 2.0e-07 60.5 228 29.4
Hund01784 Selenicereus undatus HOM05D001537 ORTHO05D002595 2.0e-07 60.5 164 31.7
AUR62035135 Chenopodium quinoa HOM05D001537 ORTHO05D002595 4.4e-07 59.3 225 29.3
C05p19320 Brassica napus HOM05D001537 ORTHO05D002595 5.7e-07 58.9 160 33.1
BolC5t30633H Brassica oleracea HOM05D001537 ORTHO05D002595 5.7e-07 58.9 160 33.1
BraA06t24777Z Brassica rapa HOM05D001537 ORTHO05D002595 7.5e-07 58.5 160 33.1
AL1G33740 Arabidopsis lyrata HOM05D001537 ORTHO05D002595 9.7e-07 58.2 221 29.0
A06p16720 Brassica napus HOM05D001537 ORTHO05D002595 1.3e-06 57.8 160 33.1
Migut.O00316 Erythranthe guttata HOM05D001537 ORTHO05D002595 2.8e-06 56.6 238 29.4


User provided reference genes

Program Settings