Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0881 Trochodendron aralioides HOM05D006734 ORTHO05D415310 1.9e-170 602.4 316 100.0
TAR627G1182 Trochodendron aralioides HOM05D007509 ORTHO05D008594 2.4e-11 73.9 42 83.3
TAR626G0661 Trochodendron aralioides HOM05D056831 ORTHO05D415491 3.1e-11 73.6 40 92.5
Nn3g16685 Nelumbo nucifera HOM05D006734 ORTHO05D008580 2.8e-07 60.5 46 60.9
Thecc.04G019600 Theobroma cacao HOM05D006734 ORTHO05D008580 1.4e-06 58.2 54 53.7
CDE09G1408 Ceratophyllum demersum HOM05D006734 ORTHO05D008580 1.8e-06 57.8 43 62.8
Lj2g0015195 Lotus japonicus HOM05D006734 ORTHO05D008580 1.8e-06 57.8 71 46.5
Sc07g0007780 Simmondsia chinensis HOM05D006734 ORTHO05D008580 1.8e-06 57.8 54 53.7
Aqoxy3G01241 Aquilegia oxysepala HOM05D006734 ORTHO05D008580 2.3e-06 57.4 45 64.4
PGR083G0596 Punica granatum HOM05D006734 ORTHO05D008580 2.3e-06 57.4 65 47.7
EL10Ac6g14101 Beta vulgaris HOM05D006734 ORTHO05D008580 3.0e-06 57.0 45 64.4
Cc07_g00010 Coffea canephora HOM05D006734 ORTHO05D008580 3.0e-06 57.0 62 50.0
Sabra16G0222500 Salix brachista HOM05D006734 ORTHO05D008580 3.0e-06 57.0 54 51.9
TAR622G1243 Trochodendron aralioides HOM05D006734 ORTHO05D008580 3.0e-06 57.0 45 62.2
Psat1g053400 Pisum sativum HOM05D006734 ORTHO05D008580 4.0e-06 56.6 62 50.0
Rhsim10G0014500 Rhododendron simsii HOM05D006734 ORTHO05D008580 4.0e-06 56.6 45 64.4
vmacro05878 Vaccinium macrocarpon HOM05D006734 ORTHO05D008580 4.0e-06 56.6 45 64.4
Cpa.g.sc108.78 Carica papaya HOM05D006734 ORTHO05D008580 5.2e-06 56.2 54 50.0
Ca_04141_v3 Cicer arietinum L. HOM05D006734 ORTHO05D008580 5.2e-06 56.2 62 48.4
Medtr6g004400 Medicago truncatula HOM05D006734 ORTHO05D008580 5.2e-06 56.2 62 48.4
Os05g0108000 Oryza sativa ssp. japonica HOM05D006734 ORTHO05D008580 5.2e-06 56.2 45 62.2
SGA_v2.0_scaffold18G08271 Striga asiatica HOM05D006734 ORTHO05D008580 5.2e-06 56.2 71 45.1
arahy.Tifrunner.gnm1.ann1.7L5D5L Arachis hypogaea HOM05D006734 ORTHO05D008580 6.8e-06 55.8 54 51.9
arahy.Tifrunner.gnm1.ann1.K7325H Arachis hypogaea HOM05D006734 ORTHO05D008580 6.8e-06 55.8 54 51.9
CiPaw.04G029800 Carya illinoinensis HOM05D006734 ORTHO05D008580 6.8e-06 55.8 56 50.0
Glyma.05G002300 Glycine max HOM05D006734 ORTHO05D008580 6.8e-06 55.8 63 46.0
Gorai.012G065200 Gossypium raimondii HOM05D006734 ORTHO05D008580 6.8e-06 55.8 54 50.0
Lalb_Chr02g0160561 Lupinus albus HOM05D006734 ORTHO05D008580 6.8e-06 55.8 54 50.0
VMungo0464G0440 Vigna mungo HOM05D006734 ORTHO05D008580 6.8e-06 55.8 54 51.9
COL.COLO4_29173 Corchorus olitorius HOM05D006734 ORTHO05D008580 8.9e-06 55.5 54 51.9
MELO3C021593.2 Cucumis melo HOM05D006734 ORTHO05D008580 8.9e-06 55.5 54 51.9
Dinv25724 Davidia involucrata HOM05D006734 ORTHO05D008580 8.9e-06 55.5 54 51.9
Phvul.004G004100 Phaseolus vulgaris HOM05D006734 ORTHO05D008580 8.9e-06 55.5 54 50.0
Sed0017476 Sechium edule HOM05D006734 ORTHO05D008580 8.9e-06 55.5 62 50.0
TWI36G0664 Tripterygium wilfordii HOM05D006734 ORTHO05D008580 8.9e-06 55.5 54 51.9


User provided reference genes

Program Settings