Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR627G0129 Trochodendron aralioides HOM05D006561 ORTHO05D008097 2.1e-138 495.7 257 100.0
Dinv14944 Davidia involucrata HOM05D006561 ORTHO05D008097 6.3e-103 377.9 257 74.3
Cfa020616 Carpinus fangiana HOM05D006561 ORTHO05D008097 7.5e-96 354.4 256 69.9
Haze_09389 Corylus avellana HOM05D006561 ORTHO05D008097 2.9e-95 352.4 256 69.9
Oeu005397.1 Olea europaea HOM05D006561 ORTHO05D008097 1.1e-94 350.5 257 69.3
Rhsim06G0203200 Rhododendron simsii HOM05D006561 ORTHO05D008097 9.2e-94 347.4 256 66.4
CSS0025681 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 1.2e-93 347.1 256 68.4
CSS0029173 Camellia sinensis var. sinensis HOM05D006561 ORTHO05D008097 1.2e-93 347.1 256 68.4
Hma1.2p1_0416F.1_g148410 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 1.6e-93 346.7 255 69.0
CiPaw.11G166900 Carya illinoinensis HOM05D006561 ORTHO05D008097 2.7e-93 345.9 255 70.6
Nn1g06395 Nelumbo nucifera HOM05D006561 ORTHO05D008097 2.3e-92 342.8 259 70.3
Migut.M00775 Erythranthe guttata HOM05D006561 ORTHO05D008097 4.7e-90 335.1 252 67.5
TWI38G0530 Tripterygium wilfordii HOM05D006561 ORTHO05D008097 1.4e-89 333.6 257 67.3
Manes.03G104900 Manihot esculenta HOM05D006561 ORTHO05D008097 5.2e-89 331.6 256 64.8
Aqoxy1G02303 Aquilegia oxysepala HOM05D006561 ORTHO05D008097 1.2e-88 330.5 250 65.2
MSTRG.15242 Avicennia marina HOM05D006561 ORTHO05D008097 4.4e-88 328.6 255 65.1
Atru.chr2.2390 Acer truncatum HOM05D006561 ORTHO05D008097 6.4e-87 324.7 256 62.9
Nitab4.5_0000246g0010 Nicotiana tabacum HOM05D006561 ORTHO05D008097 1.9e-86 323.2 257 63.8
GSVIVG01014276001 Vitis vinifera HOM05D006561 ORTHO05D008097 2.4e-86 322.8 255 67.5
Nitab4.5_0002019g0020 Nicotiana tabacum HOM05D006561 ORTHO05D008097 3.2e-86 322.4 257 63.4
PSO675G8981 Papaver somniferum HOM05D006561 ORTHO05D008097 1.2e-85 320.5 257 63.8
PGSC0003DMG401012439 Solanum tuberosum HOM05D006561 ORTHO05D008097 2.7e-85 319.3 256 63.3
Sc16g0007290 Simmondsia chinensis HOM05D006561 ORTHO05D008097 6.6e-84 314.7 260 62.3
Solyc07g062780.3 Solanum lycopersicum HOM05D006561 ORTHO05D008097 6.6e-84 314.7 257 63.0
Sopen07g031000 Solanum pennellii HOM05D006561 ORTHO05D008097 6.6e-84 314.7 257 63.4
MBI02_g25404_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 8.6e-84 314.3 254 66.9
Ciclev10009269m.g Citrus clementina HOM05D006561 ORTHO05D008097 2.5e-83 312.8 255 63.5
PGR083G2053 Punica granatum HOM05D006561 ORTHO05D008097 2.5e-83 312.8 256 62.1
Potri.011G141200 Populus trichocarpa HOM05D006561 ORTHO05D008097 1.6e-82 310.1 260 61.9
ClCG11G017750 Citrullus lanatus HOM05D006561 ORTHO05D008097 2.1e-82 309.7 255 62.7
Thecc.07G098700 Theobroma cacao HOM05D006561 ORTHO05D008097 2.8e-82 309.3 275 57.5
Cc05_g11670 Coffea canephora HOM05D006561 ORTHO05D008097 8.1e-82 307.8 252 61.9
ATR0602G252 Amborella trichopoda HOM05D006561 ORTHO05D008097 1.1e-81 307.4 255 61.6
Eucgr.F01175 Eucalyptus grandis HOM05D006561 ORTHO05D008097 1.1e-81 307.4 255 60.8
Sabra11G0126800 Salix brachista HOM05D006561 ORTHO05D008097 1.1e-81 307.4 260 60.4
Gohir.D01G047500 Gossypium hirsutum HOM05D006561 ORTHO05D008097 4.0e-81 305.4 256 59.0
Gorai.002G067000 Gossypium raimondii HOM05D006561 ORTHO05D008097 4.0e-81 305.4 256 59.0
Hund17607 Selenicereus undatus HOM05D006561 ORTHO05D008097 8.9e-81 304.3 258 61.6
Gohir.A01G061000 Gossypium hirsutum HOM05D006561 ORTHO05D008097 1.5e-80 303.5 256 59.0
Lsat_1_v5_gn_5_127501 Lactuca sativa HOM05D006561 ORTHO05D008097 1.5e-80 303.5 256 61.3
DCAR_017121 Daucus carota HOM05D006561 ORTHO05D008097 1.3e-79 300.4 257 58.8
Sed0026268 Sechium edule HOM05D006561 ORTHO05D008097 1.7e-79 300.1 255 61.2
CsaV3_4G033370 Cucumis sativus L. HOM05D006561 ORTHO05D008097 2.2e-79 299.7 255 60.8
Cpa.g.sc80.2 Carica papaya HOM05D006561 ORTHO05D008097 2.9e-79 299.3 251 61.8
VMungo1080G0633 Vigna mungo HOM05D006561 ORTHO05D008097 8.3e-79 297.7 258 61.2
Phvul.005G029100 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 1.1e-78 297.4 256 61.3
EL10Ac4g08253 Beta vulgaris HOM05D006561 ORTHO05D008097 1.4e-78 297.0 256 60.5
Peaxi162Scf00069g01837 Petunia axillaris HOM05D006561 ORTHO05D008097 1.4e-78 297.0 256 61.7
THA.LOC104818093 Tarenaya hassleriana HOM05D006561 ORTHO05D008097 1.4e-78 297.0 254 61.4
unitig_747.g21579 Utricularia gibba HOM05D006561 ORTHO05D008097 1.9e-78 296.6 253 61.7
MELO3C025617.2 Cucumis melo HOM05D006561 ORTHO05D008097 7.1e-78 294.7 263 58.9
Lalb_Chr25g0286221 Lupinus albus HOM05D006561 ORTHO05D008097 7.1e-78 294.7 257 60.3
vmacro11896 Vaccinium macrocarpon HOM05D006561 ORTHO05D008097 1.2e-77 293.9 326 49.1
Lj8A153G39 Lonicera japonica HOM05D006561 ORTHO05D008097 4.6e-77 292.0 209 70.8
Sp3g13360 Schrenkiella parvula HOM05D006561 ORTHO05D008097 1.0e-76 290.8 253 59.3
Thhalv10021394m.g Eutrema salsugineum HOM05D006561 ORTHO05D008097 3.9e-76 288.9 253 57.3
CARHR090130 Cardamine hirsuta HOM05D006561 ORTHO05D008097 1.1e-75 287.3 253 58.5
AUR62019482 Chenopodium quinoa HOM05D006561 ORTHO05D008097 2.5e-75 286.2 258 57.4
Prupe.4G174000 Prunus persica HOM05D006561 ORTHO05D008097 2.5e-75 286.2 215 64.2
CAN.G162.30 Capsicum annuum HOM05D006561 ORTHO05D008097 4.3e-75 285.4 218 65.6
RcHm_v2.0_Chr5g0032331 Rosa chinensis HOM05D006561 ORTHO05D008097 4.3e-75 285.4 258 57.8
Glyma.13G273500 Glycine max HOM05D006561 ORTHO05D008097 7.3e-75 284.6 257 59.1
Psat0s1402g0080 Pisum sativum HOM05D006561 ORTHO05D008097 7.3e-75 284.6 251 59.0
Ca_03532_v3 Cicer arietinum L. HOM05D006561 ORTHO05D008097 2.8e-74 282.7 255 59.2
Duzib213G1006 Durio zibethinus HOM05D006561 ORTHO05D008097 4.7e-74 282.0 253 56.1
BcaB06g29539 Brassica carinata HOM05D006561 ORTHO05D008097 6.2e-74 281.6 253 55.3
A05p34300 Brassica napus HOM05D006561 ORTHO05D008097 1.8e-73 280.0 253 54.9
C05p52080 Brassica napus HOM05D006561 ORTHO05D008097 5.2e-73 278.5 253 54.9
BolC5t33893H Brassica oleracea HOM05D006561 ORTHO05D008097 5.2e-73 278.5 253 54.9
BraA05t22251Z Brassica rapa HOM05D006561 ORTHO05D008097 5.2e-73 278.5 256 53.9
AL3G27540 Arabidopsis lyrata HOM05D006561 ORTHO05D008097 1.2e-72 277.3 253 58.1
ECA234G0004 Erigeron canadensis HOM05D006561 ORTHO05D008097 1.2e-72 277.3 256 56.2
Aa31LG8G2350 Aethionema arabicum HOM05D006724 ORTHO05D008514 1.5e-72 276.9 235 60.0
SHI39306 Sapria himalayana HOM05D006561 ORTHO05D008097 1.5e-72 276.9 253 55.3
SHI39545 Sapria himalayana HOM05D006561 ORTHO05D008097 1.5e-72 276.9 253 55.3
AT3G15150 Arabidopsis thaliana HOM05D006561 ORTHO05D008097 3.4e-72 275.8 253 57.3
HanXRQChr10g0302511 Helianthus annuus HOM05D006561 ORTHO05D008097 4.4e-72 275.4 256 57.0
Carub.0003s1480 Capsella rubella HOM05D006561 ORTHO05D008097 5.8e-72 275.0 253 56.1
CANSAT35G0349 Cannabis sativa HOM05D006561 ORTHO05D008097 7.6e-72 274.6 255 58.8
AUR62036152 Chenopodium quinoa HOM05D006561 ORTHO05D008097 9.9e-72 274.2 258 55.8
FvH4_3g19260 Fragaria vesca HOM05D006561 ORTHO05D008097 3.8e-71 272.3 256 55.9
FAN25G3572 Fragaria x ananassa HOM05D006561 ORTHO05D008097 3.8e-71 272.3 256 56.2
MBI02_g44100_MAGBIO Magnolia biondii HOM05D006561 ORTHO05D008097 3.8e-71 272.3 226 65.0
arahy.Tifrunner.gnm1.ann1.RM2LTG Arachis hypogaea HOM05D006561 ORTHO05D008097 8.4e-71 271.2 254 57.5
FAN11G0360 Fragaria x ananassa HOM05D006561 ORTHO05D008097 2.4e-70 269.6 256 55.5
TPR.G7947 Trifolium pratense HOM05D006561 ORTHO05D008097 5.4e-70 268.5 255 56.1
MD03G1235300 Malus domestica HOM05D006561 ORTHO05D008097 1.6e-69 266.9 254 56.7
Medtr2g078640 Medicago truncatula HOM05D006561 ORTHO05D008097 6.0e-69 265.0 251 55.0
Phvul.005G075200 Phaseolus vulgaris HOM05D006561 ORTHO05D008097 1.1e-67 260.8 215 61.4
SGA_v2.0_scaffold34G13795 Striga asiatica HOM05D006561 ORTHO05D008097 4.3e-67 258.8 210 61.9
Zm00001eb295840 Zea mays HOM05D006561 ORTHO05D008097 9.6e-67 257.7 242 50.8
HPP92_024567 Vanilla planifolia HOM05D006561 ORTHO05D008097 1.3e-63 247.3 303 48.2
Lj3g0026269 Lotus japonicus HOM05D006561 ORTHO05D008097 3.8e-63 245.7 208 60.1
MD11G1255800 Malus domestica HOM05D006561 ORTHO05D008097 4.8e-58 228.8 187 62.0
Ah.06g184730 Amaranthus hybridus HOM05D006561 ORTHO05D008097 9.0e-57 224.6 257 49.8
arahy.Tifrunner.gnm1.ann1.YD6KBQ Arachis hypogaea HOM05D006561 ORTHO05D008097 3.4e-56 222.6 254 50.4
PSO541G4753 Papaver somniferum HOM05D006561 ORTHO05D008097 2.7e-53 213.0 182 61.0
Actinidia12544 Actinidia chinensis HOM05D006561 ORTHO05D008097 2.1e-50 203.4 182 57.7
QL08p023698 Quercus lobata HOM05D006561 ORTHO05D008097 1.6e-45 187.2 142 66.2
Actinidia07498 Actinidia chinensis HOM05D006561 ORTHO05D008097 1.3e-44 184.1 125 72.8
Pp3c22_18560 Physcomitrium patens HOM05D006561 ORTHO05D008097 1.8e-44 183.7 253 40.7
Haze_09400 Corylus avellana HOM05D006561 ORTHO05D008097 1.0e-39 167.9 134 69.4
AagrBONN_evm.TU.Sc2ySwM_228.4556 Anthoceros agrestis HOM05D006561 ORTHO05D008097 2.5e-38 163.3 283 34.6
FAN16G3278 Fragaria x ananassa HOM05D006561 ORTHO05D008097 4.6e-37 159.1 128 56.2
Mapoly0096s0048 Marchantia polymorpha HOM05D006561 ORTHO05D008097 4.6e-37 159.1 247 35.6
QL08p023707 Quercus lobata HOM05D006561 ORTHO05D008097 6.0e-37 158.7 135 64.4
Hma1.2p1_0416F.1_g148400 Hydrangea macrophylla HOM05D006561 ORTHO05D008097 3.9e-36 156.0 181 51.9
CDE08G0579 Ceratophyllum demersum HOM05D006561 ORTHO05D008097 1.5e-35 154.1 151 53.6
SMO143G0268 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 3.7e-34 149.4 237 37.6
SMO265G0056 Selaginella moellendorffii HOM05D006561 ORTHO05D008097 5.9e-32 142.1 198 40.9
CBR_g861 Chara braunii HOM05D006561 ORTHO05D008097 1.4e-30 137.5 222 30.6
Nn5g27383 Nelumbo nucifera HOM05D006561 ORTHO05D008097 1.6e-26 124.0 98 64.3
arahy.Tifrunner.gnm1.ann1.YKS4T6 Arachis hypogaea HOM05D006561 ORTHO05D008097 1.4e-25 120.9 146 48.6
Pp3c23_10880 Physcomitrium patens HOM05D006561 ORTHO05D008097 4.5e-16 89.4 119 32.8
PRCOL_00000682 Prasinoderma coloniale HOM05D006561 ORTHO05D008097 3.2e-14 83.2 247 26.7
Pp3c20_12000 Physcomitrium patens HOM05D006561 ORTHO05D008097 5.2e-12 75.9 113 32.7
Haze_09398 Corylus avellana HOM05D006561 ORTHO05D008097 1.1e-11 74.7 57 75.4
Haze_09393 Corylus avellana HOM05D006561 ORTHO05D008097 1.5e-11 74.3 113 46.0
Mapoly0066s0041 Marchantia polymorpha HOM05D006561 ORTHO05D008097 2.0e-11 73.9 89 39.3
Pp3c23_16570 Physcomitrium patens HOM05D006561 ORTHO05D309072 1.1e-09 68.2 74 43.2
Os05g0563500 Oryza sativa ssp. japonica HOM05D006561 ORTHO05D008097 3.1e-09 66.6 76 44.7
Haze_09394 Corylus avellana HOM05D006561 ORTHO05D165302 7.0e-09 65.5 134 36.6
Nn2g11894 Nelumbo nucifera HOM05D001060 ORTHO05D008097 9.1e-09 65.1 124 38.7


User provided reference genes

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