Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0539 Trochodendron aralioides HOM05D004008 ORTHO05D005383 3.5e-214 748.0 381 100.0
TAR626G1776 Trochodendron aralioides HOM05D004008 ORTHO05D005383 3.5e-214 748.0 381 100.0
Dinv19616 Davidia involucrata HOM05D004008 ORTHO05D005383 1.1e-175 620.2 375 84.0
Dinv42507 Davidia involucrata HOM05D004008 ORTHO05D005383 3.6e-171 605.1 365 83.6
Actinidia12791 Actinidia chinensis HOM05D004008 ORTHO05D005383 5.8e-169 597.8 371 81.4
Haze_11762 Corylus avellana HOM05D004008 ORTHO05D005383 1.4e-167 593.2 377 81.7
Hma1.2p1_0637F.1_g193530 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 1.4e-167 593.2 372 80.1
ATR0763G059 Amborella trichopoda HOM05D004008 ORTHO05D005383 4.1e-167 591.7 366 82.5
Cfa008746 Carpinus fangiana HOM05D004008 ORTHO05D005383 7.1e-167 590.9 377 81.4
CSS0024885 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 4.6e-166 588.2 366 82.0
Hma1.2p1_0334F.1_g128730 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 1.1e-164 583.6 351 84.3
Lsat_1_v5_gn_7_112100 Lactuca sativa HOM05D004008 ORTHO05D005383 8.1e-163 577.4 366 80.3
CiPaw.01G129500 Carya illinoinensis HOM05D004008 ORTHO05D005383 4.0e-162 575.1 350 84.6
Aqoxy6G00207 Aquilegia oxysepala HOM05D004008 ORTHO05D005383 1.5e-161 573.2 351 83.5
QL12p007515 Quercus lobata HOM05D004008 ORTHO05D005383 9.9e-161 570.5 368 81.0
GSVIVG01002505001 Vitis vinifera HOM05D004008 ORTHO05D005383 9.9e-161 570.5 328 87.5
TAR624G0715 Trochodendron aralioides HOM05D004008 ORTHO05D005383 1.7e-160 569.7 329 89.4
Oeu052004.1 Olea europaea HOM05D004008 ORTHO05D005383 2.2e-160 569.3 361 79.5
CDE05G3126 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 3.8e-160 568.5 349 84.0
MBI18_g03839_MAGBIO Magnolia biondii HOM05D004008 ORTHO05D005383 4.9e-160 568.2 362 82.0
CANSAT78G1304 Cannabis sativa HOM05D004008 ORTHO05D005383 8.4e-160 567.4 355 83.7
CDE11G0020 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 4.2e-159 565.1 349 83.4
Manes.11G103000 Manihot esculenta HOM05D004008 ORTHO05D005383 5.4e-159 564.7 353 83.0
Gohir.A03G165100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 4.6e-158 561.6 352 81.8
Lj1A905T43 Lonicera japonica HOM05D004008 ORTHO05D005383 6.0e-158 561.2 375 77.6
Nitab4.5_0001791g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 7.8e-158 560.8 373 76.9
Cc05_g16090 Coffea canephora HOM05D004008 ORTHO05D005383 1.0e-157 560.5 371 77.4
Nitab4.5_0000134g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 2.3e-157 559.3 373 76.7
Prupe.1G348400 Prunus persica HOM05D004008 ORTHO05D005383 2.3e-157 559.3 354 82.5
TWI75G1091 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 3.9e-157 558.5 371 77.9
Gohir.D02G188300 Gossypium hirsutum HOM05D004008 ORTHO05D005383 5.1e-157 558.1 355 81.1
Sed0006741 Sechium edule HOM05D004008 ORTHO05D005383 6.6e-157 557.8 354 80.8
Gorai.005G211000 Gossypium raimondii HOM05D004008 ORTHO05D005383 8.7e-157 557.4 352 81.5
SalBow8G2118 Salvia bowleyana HOM05D004008 ORTHO05D005383 1.1e-156 557.0 366 77.0
Thecc.02G158900 Theobroma cacao HOM05D004008 ORTHO05D005383 3.3e-156 555.4 352 81.0
CSS0025050 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 5.6e-156 554.7 365 79.2
CsaV3_3G031800 Cucumis sativus L. HOM05D004008 ORTHO05D005383 7.3e-156 554.3 353 80.2
Glyma.11G094700 Glycine max HOM05D004008 ORTHO05D005383 9.6e-156 553.9 324 85.8
HanXRQChr05g0153591 Helianthus annuus HOM05D004008 ORTHO05D005383 9.6e-156 553.9 364 79.1
HPP92_002271 Vanilla planifolia HOM05D004008 ORTHO05D005383 9.6e-156 553.9 363 79.9
arahy.Tifrunner.gnm1.ann1.416KLQ Arachis hypogaea HOM05D004008 ORTHO05D005383 1.6e-155 553.1 353 82.2
Duzib132G0865 Durio zibethinus HOM05D004008 ORTHO05D005383 2.1e-155 552.7 352 80.4
Glyma.12G021100 Glycine max HOM05D004008 ORTHO05D005383 2.1e-155 552.7 324 85.5
PSO541G2232 Papaver somniferum HOM05D004008 ORTHO05D005383 6.2e-155 551.2 383 74.9
Peaxi162Scf00452g00831 Petunia axillaris HOM05D004008 ORTHO05D005383 6.2e-155 551.2 356 77.5
Potri.007G072500 Populus trichocarpa HOM05D004008 ORTHO05D005383 6.2e-155 551.2 351 80.6
TWI12G0055 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 1.1e-154 550.4 346 82.1
arahy.Tifrunner.gnm1.ann1.KXDS8S Arachis hypogaea HOM05D004008 ORTHO05D005383 1.4e-154 550.1 325 86.5
ClCG10G012060 Citrullus lanatus HOM05D004008 ORTHO05D005383 1.4e-154 550.1 368 78.3
Ciclev10031858m.g Citrus clementina HOM05D004008 ORTHO05D005383 1.4e-154 550.1 369 77.2
Ca_26057_v3 Cicer arietinum L. HOM05D004008 ORTHO05D005383 1.8e-154 549.7 350 80.9
MD13G1004100 Malus domestica HOM05D004008 ORTHO05D005383 2.4e-154 549.3 353 80.2
Sc10g0004580 Simmondsia chinensis HOM05D004008 ORTHO05D005383 4.0e-154 548.5 352 79.5
Sopen07g034650 Solanum pennellii HOM05D004008 ORTHO05D005383 4.0e-154 548.5 356 76.7
PSO675G0755 Papaver somniferum HOM05D004008 ORTHO05D005383 6.9e-154 547.7 383 74.4
arahy.Tifrunner.gnm1.ann1.6Z73IP Arachis hypogaea HOM05D004008 ORTHO05D005383 9.0e-154 547.4 373 76.4
Cpa.g.sc43.43 Carica papaya HOM05D004008 ORTHO05D005383 9.0e-154 547.4 352 81.2
Rhsim06G0054400 Rhododendron simsii HOM05D004008 ORTHO05D005383 9.0e-154 547.4 380 76.1
Solyc07g066470.3 Solanum lycopersicum HOM05D004008 ORTHO05D005383 9.0e-154 547.4 356 76.4
COL.COLO4_33043 Corchorus olitorius HOM05D004008 ORTHO05D005383 1.2e-153 547.0 367 78.5
Psat7g172760 Pisum sativum HOM05D004008 ORTHO05D005383 1.5e-153 546.6 359 78.6
Glyma.01G227400 Glycine max HOM05D004008 ORTHO05D005383 2.0e-153 546.2 336 83.9
Medtr4g076600 Medicago truncatula HOM05D004008 ORTHO05D005383 2.6e-153 545.8 343 81.3
VMungo1215G1012 Vigna mungo HOM05D004008 ORTHO05D005383 2.6e-153 545.8 339 82.9
CAN.G943.40 Capsicum annuum HOM05D004008 ORTHO05D005383 3.4e-153 545.4 356 76.7
vmacro11667 Vaccinium macrocarpon HOM05D004008 ORTHO05D005383 3.4e-153 545.4 463 64.1
Phvul.011G177100 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 4.4e-153 545.0 348 80.7
PGSC0003DMG400022126 Solanum tuberosum HOM05D004008 ORTHO05D005383 7.6e-153 544.3 356 76.4
Potri.005G091600 Populus trichocarpa HOM05D004008 ORTHO05D005383 1.3e-152 543.5 328 82.6
Eucgr.C00142 Eucalyptus grandis HOM05D004008 ORTHO05D005383 1.7e-152 543.1 377 75.1
Nitab4.5_0001749g0010 Nicotiana tabacum HOM05D004008 ORTHO05D005383 1.7e-152 543.1 351 76.6
Duzib248G1235 Durio zibethinus HOM05D004008 ORTHO05D005383 2.2e-152 542.7 352 79.3
MD16G1003400 Malus domestica HOM05D004008 ORTHO05D005383 3.8e-152 542.0 353 79.6
Phvul.002G034500 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 3.8e-152 542.0 340 81.5
LjContig00222g0009052 Lotus japonicus HOM05D004008 ORTHO05D005383 4.9e-152 541.6 323 85.4
THA.LOC104800860 Tarenaya hassleriana HOM05D004008 ORTHO05D005383 8.4e-152 540.8 375 76.8
Gorai.012G134300 Gossypium raimondii HOM05D004008 ORTHO05D005383 1.4e-151 540.0 352 79.3
RcHm_v2.0_Chr4g0446801 Rosa chinensis HOM05D004008 ORTHO05D005383 1.4e-151 540.0 356 79.2
TPR.G11683 Trifolium pratense HOM05D004008 ORTHO05D005383 1.4e-151 540.0 358 77.7
Ah.10g029970 Amaranthus hybridus HOM05D004008 ORTHO05D005383 1.9e-151 539.7 346 78.3
PGR142G0362 Punica granatum HOM05D004008 ORTHO05D005383 3.2e-151 538.9 351 78.9
Peaxi162Scf00006g00139 Petunia axillaris HOM05D004008 ORTHO05D005383 7.1e-151 537.7 369 75.3
Lalb_Chr09g0320431 Lupinus albus HOM05D004008 ORTHO05D005383 9.3e-151 537.3 342 82.2
HanXRQChr01g0007731 Helianthus annuus HOM05D004008 ORTHO05D005383 2.1e-150 536.2 329 81.8
MSTRG.14544 Avicennia marina HOM05D004008 ORTHO05D005383 3.5e-150 535.4 370 72.4
unitig_21.g20251 Utricularia gibba HOM05D004008 ORTHO05D005383 3.5e-150 535.4 366 74.0
MSTRG.13067 Avicennia marina HOM05D004008 ORTHO05D005383 1.7e-149 533.1 359 75.2
EL10Ac2g02758 Beta vulgaris HOM05D004008 ORTHO05D005383 2.3e-149 532.7 352 75.6
Aa31LG3G18290 Aethionema arabicum HOM05D004008 ORTHO05D005383 3.0e-149 532.3 365 76.4
C02p03470 Brassica napus HOM05D004008 ORTHO05D005383 5.1e-149 531.6 370 74.6
VMungo1127G2017 Vigna mungo HOM05D004008 ORTHO05D005383 8.7e-149 530.8 346 78.9
SGA_v2.0_scaffold186G40215 Striga asiatica HOM05D004008 ORTHO05D005383 1.1e-148 530.4 394 69.5
AT5G08280 Arabidopsis thaliana HOM05D004008 ORTHO05D005383 1.5e-148 530.0 352 76.7
Hund13394 Selenicereus undatus HOM05D004008 ORTHO05D005383 1.5e-148 530.0 355 75.5
Gohir.A04G108500 Gossypium hirsutum HOM05D004008 ORTHO05D005383 1.9e-148 529.6 351 78.9
AL6G18680 Arabidopsis lyrata HOM05D004008 ORTHO05D005383 2.5e-148 529.3 352 77.0
RcHm_v2.0_Chr1g0330101 Rosa chinensis HOM05D004008 ORTHO05D005383 2.5e-148 529.3 352 77.3
C09p68660 Brassica napus HOM05D004008 ORTHO05D005383 3.3e-148 528.9 352 77.6
Migut.M01552 Erythranthe guttata HOM05D004008 ORTHO05D005383 5.6e-148 528.1 360 74.4
FvH4_7g04700 Fragaria vesca HOM05D004008 ORTHO05D005383 5.6e-148 528.1 355 76.9
FAN10G2193 Fragaria x ananassa HOM05D004008 ORTHO05D005383 5.6e-148 528.1 355 76.9
BraA02t04947Z Brassica rapa HOM05D004008 ORTHO05D005383 7.3e-148 527.7 370 74.1
Thhalv10013814m.g Eutrema salsugineum HOM05D004008 ORTHO05D005383 9.6e-148 527.3 352 77.6
CARHR204850 Cardamine hirsuta HOM05D004008 ORTHO05D005383 1.6e-147 526.6 352 76.7
CDE02G2123 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 1.6e-147 526.6 326 81.6
A10p28400 Brassica napus HOM05D004008 ORTHO05D005383 2.1e-147 526.2 352 77.0
BraA10t44887Z Brassica rapa HOM05D004008 ORTHO05D005383 2.1e-147 526.2 352 77.0
FAN07G1552 Fragaria x ananassa HOM05D004008 ORTHO05D005383 2.1e-147 526.2 353 76.8
Sp6g34680 Schrenkiella parvula HOM05D004008 ORTHO05D005383 2.1e-147 526.2 371 74.1
FAN12G0417 Fragaria x ananassa HOM05D004008 ORTHO05D005383 2.8e-147 525.8 353 76.5
C03p04200 Brassica napus HOM05D004008 ORTHO05D005383 3.6e-147 525.4 352 77.3
BolC2t06308H Brassica oleracea HOM05D004008 ORTHO05D005383 4.8e-147 525.0 370 73.8
BolC9t59612H Brassica oleracea HOM05D004008 ORTHO05D005383 4.8e-147 525.0 374 74.3
Carub.0006s0716 Capsella rubella HOM05D004008 ORTHO05D005383 4.8e-147 525.0 352 76.4
BcaNung05097 Brassica carinata HOM05D004008 ORTHO05D005383 8.1e-147 524.2 352 77.0
AUR62031735 Chenopodium quinoa HOM05D004008 ORTHO05D005383 8.1e-147 524.2 365 72.1
BcaB01g05618 Brassica carinata HOM05D004008 ORTHO05D005383 1.4e-146 523.5 352 77.0
BolC3t12952H Brassica oleracea HOM05D004008 ORTHO05D005383 1.4e-146 523.5 352 77.0
ECA248G2166 Erigeron canadensis HOM05D004008 ORTHO05D005383 2.4e-146 522.7 319 83.1
AUR62032620 Chenopodium quinoa HOM05D004008 ORTHO05D005383 3.1e-146 522.3 370 71.4
A03p03710 Brassica napus HOM05D004008 ORTHO05D005383 4.0e-146 521.9 352 76.7
BraA03t09719Z Brassica rapa HOM05D004008 ORTHO05D005383 4.0e-146 521.9 352 76.7
Nitab4.5_0001080g0030 Nicotiana tabacum HOM05D004008 ORTHO05D005383 9.0e-146 520.8 386 69.2
Migut.H01689 Erythranthe guttata HOM05D004008 ORTHO05D005383 2.0e-145 519.6 360 72.5
FAN03G0704 Fragaria x ananassa HOM05D004008 ORTHO05D005383 3.4e-145 518.8 350 77.1
Sabra07G0061100 Salix brachista HOM05D004008 ORTHO05D005383 5.8e-145 518.1 299 86.0
Zm00001eb207370 Zea mays HOM05D004008 ORTHO05D005383 1.4e-143 513.5 341 76.0
FAN06G1123 Fragaria x ananassa HOM05D004008 ORTHO05D005383 5.4e-143 511.5 355 75.8
FAN06G2867 Fragaria x ananassa HOM05D004008 ORTHO05D005383 5.4e-143 511.5 355 75.8
Sabra05G0076100 Salix brachista HOM05D004008 ORTHO05D005383 2.7e-142 509.2 392 68.9
Os02g0168800 Oryza sativa ssp. japonica HOM05D004008 ORTHO05D005383 3.9e-141 505.4 341 74.8
FAN17G0554 Fragaria x ananassa HOM05D004008 ORTHO05D005383 1.5e-140 503.4 302 82.8
Lj4g0025599 Lotus japonicus HOM05D004008 ORTHO05D005383 7.4e-140 501.1 350 74.3
SGA_v2.0_scaffold7G03592 Striga asiatica HOM05D004008 ORTHO05D005383 1.6e-139 500.0 363 70.8
Gohir.D04G148100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 2.0e-137 493.0 285 86.7
MELO3C024010.2 Cucumis melo HOM05D004008 ORTHO05D005383 4.5e-137 491.9 285 85.6
Pp3c6_15990 Physcomitrium patens HOM05D004008 ORTHO05D005383 2.5e-135 486.1 314 77.4
DCAR_013737 Daucus carota HOM05D004008 ORTHO05D005383 4.2e-135 485.3 289 84.8
BcaB08g37268 Brassica carinata HOM05D004008 ORTHO05D005383 1.2e-134 483.8 352 72.4
Pp3c15_6300 Physcomitrium patens HOM05D004008 ORTHO05D005383 1.8e-133 479.9 324 75.0
Mapoly0015s0060 Marchantia polymorpha HOM05D004008 ORTHO05D005383 2.3e-133 479.6 322 73.3
SEGI_21965 Sequoiadendron giganteum HOM05D004008 ORTHO05D005383 3.0e-133 479.2 302 79.1
BcaC03g13214 Brassica carinata HOM05D004008 ORTHO05D005383 3.9e-133 478.8 370 69.2
Pp3c5_16770 Physcomitrium patens HOM05D004008 ORTHO05D005383 5.1e-133 478.4 326 74.2
Zm00001eb233020 Zea mays HOM05D004008 ORTHO05D005383 1.5e-132 476.9 300 78.0
SMO364G0819 Selaginella moellendorffii HOM05D004008 ORTHO05D005383 6.2e-131 471.5 327 72.8
CBR_g48425 Chara braunii HOM05D004008 ORTHO05D005383 1.4e-130 470.3 324 73.1
Cre16.g663900 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D005383 3.7e-115 419.1 297 71.0
Oeu001944.1 Olea europaea HOM05D004008 ORTHO05D005383 1.6e-110 403.7 260 79.2
MCO01G747 Micromonas commoda HOM05D004008 ORTHO05D005383 4.7e-110 402.1 322 64.3
Sed0020742 Sechium edule HOM05D004008 ORTHO05D005383 5.3e-106 388.7 250 78.8
FvH4_4g37020 Fragaria vesca HOM05D004008 ORTHO05D005383 8.0e-102 374.8 257 76.3
PRCOL_00005560 Prasinoderma coloniale HOM05D004008 ORTHO05D005383 1.1e-100 370.9 290 65.2
AagrBONN_evm.TU.Sc2ySwM_117.3714 Anthoceros agrestis HOM05D004008 ORTHO05D005383 1.2e-92 344.4 231 77.1
Nn7g38125 Nelumbo nucifera HOM05D004008 ORTHO05D005383 2.9e-88 329.7 211 81.0
Psat5g025240 Pisum sativum HOM05D004008 ORTHO05D005383 5.5e-79 298.9 305 58.7
Actinidia07354 Actinidia chinensis HOM05D004008 ORTHO05D005383 2.6e-76 290.0 374 48.4
Haze_26918 Corylus avellana HOM05D004008 ORTHO05D163716 3.9e-72 276.2 307 51.8
arahy.Tifrunner.gnm1.ann1.VI50KN Arachis hypogaea HOM05D004008 ORTHO05D005383 7.3e-71 271.9 188 74.5
Glyma.11G015433 Glycine max HOM05D004008 ORTHO05D005383 7.3e-47 192.2 112 83.9
Psat5g278360 Pisum sativum HOM05D004008 ORTHO05D000002 1.4e-45 188.0 113 80.5
C08p23470 Brassica napus HOM05D004008 ORTHO05D032875 3.0e-40 170.2 183 56.3
BolC8t49976H Brassica oleracea HOM05D004008 ORTHO05D032875 3.0e-40 170.2 183 56.3
BcaC07g39332 Brassica carinata HOM05D004008 ORTHO05D032875 8.7e-40 168.7 171 58.5
BcaC08g43816 Brassica carinata HOM05D004008 ORTHO05D013026 2.7e-33 147.1 101 72.3
Cre02.g113850 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D145669 1.3e-32 144.8 284 33.8
BcaC04g20718 Brassica carinata HOM05D004008 ORTHO05D027220 1.7e-32 144.4 99 73.7
C09p39940 Brassica napus HOM05D004008 ORTHO05D027220 1.7e-32 144.4 99 73.7
C03p57930 Brassica napus HOM05D004008 ORTHO05D027220 1.1e-31 141.7 99 72.7
C02p56520 Brassica napus HOM05D000109 ORTHO05D000210 1.5e-31 141.4 98 72.4
BolC9t56891H Brassica oleracea HOM05D004008 ORTHO05D013026 9.6e-31 138.7 103 68.9
BcaC03g17816 Brassica carinata HOM05D003055 ORTHO05D013026 3.1e-29 133.7 104 64.4
C02p58390 Brassica napus HOM05D003055 ORTHO05D013026 4.5e-28 129.8 103 64.1
BolC3t18065H Brassica oleracea HOM05D003055 ORTHO05D013026 6.5e-19 99.4 64 76.6
TPR.G13755 Trifolium pratense HOM05D004008 ORTHO05D410752 4.6e-17 93.2 65 76.9
Rhsim06G0151600 Rhododendron simsii HOM05D001371 ORTHO05D001319 1.1e-15 88.6 61 78.7
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 2.1e-14 84.3 49 79.6
C05p24790 Brassica napus HOM05D003055 ORTHO05D013026 6.7e-08 62.8 35 77.1
BcaC01g02956 Brassica carinata HOM05D003055 ORTHO05D013026 7.4e-07 59.3 35 74.3


User provided reference genes

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