Gene: Nitab4.5_0001749g0010
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0001749g0010
- Transcript Identifier Nitab4.5_0001749g0010.1
- Gene Type Coding gene
- Location Nitab4.5_0001749 : 125018-132912 : positive
Gene Family Information
- ID HOM05D004008
- #Genes/#Species 175/98
- Phylogenetic origin
- ID ORTHO05D005383
- #Genes/#Species 159/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0001749g0010.1
- SR1-identifier Nta14g12970.1
Descriptions
- Description Protein Iojap/ribosomal silencing factor RsfS, Tetrapyrrole biosynthesis, hydroxymethylbilane synthase, Porphobilinogen deaminase, C-terminal, Oligomerisation domain, Porphobilinogen deaminase, dipyrromethane cofactor binding site, Porphobilinogen deaminase, N-terminal
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0033014 | IEA | InterPro | tetrapyrrole biosynthetic process | |
| GO:0015995 | ISO | PLAZA Integrative Orthology | chlorophyll biosynthetic process | AT5G08280 |
| GO:0006779 | ISO | PLAZA Integrative Orthology | porphyrin-containing compound biosynthetic process | AT5G08280 |
| GO:1900865 | ISO | PLAZA Integrative Orthology | chloroplast RNA modification | AT5G08280 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT5G08280 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004418 | IEA | InterPro | hydroxymethylbilane synthase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G08280 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT5G08280 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G08280 |
| GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT5G08280 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT5G08280 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000860 | Porphobilinogen deaminase |
| IPR022417 | Porphobilinogen deaminase, N-terminal |
| IPR036803 | Porphobilinogen deaminase, C-terminal domain superfamily |
| IPR004394 | Protein Iojap/ribosomal silencing factor RsfS |
| IPR043519 | Nucleotidyltransferase superfamily |
| IPR022418 | Porphobilinogen deaminase, C-terminal |
| Mapman id | Description |
|---|---|
| 7.12.2.2 | Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase |