Gene: PGSC0003DMG400022126

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400022126
  • Transcript Identifier PGSC0003DMT400056896
  • Gene Type Coding gene
  • Location ST4.03ch07 : 56507421-56510404 : negative

Gene Family Information

  • ID HOM05D004008
  • #Genes/#Species 175/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37431153
  • id PGSC0003DMG400022126.v4.03
  • uniprot M1C015

Descriptions

  • Description Porphobilinogen deaminase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006783
IBA
GOA Databaseheme biosynthetic process
GO:0015995
ISO
PLAZA Integrative Orthologychlorophyll biosynthetic process AT5G08280
GO:0042742
IEA
GOA Databasedefense response to bacterium
GO:1900865
IEA
GOA Databasechloroplast RNA modification
GO:0018160
IEA
GOA Databasepeptidyl-pyrromethane cofactor linkage
GO:0033014
IEA
GOA Databasetetrapyrrole biosynthetic process
GO:0033014
IEA
InterProtetrapyrrole biosynthetic process
GO:0006779
IEA
GOA Databaseporphyrin-containing compound biosynthetic process
GO:0006782
IEA
GOA Databaseprotoporphyrinogen IX biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G08280
GO:0004418
IBA
IEA
GOA Databasehydroxymethylbilane synthase activity
GO:0004418
IEA
InterProhydroxymethylbilane synthase activity
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048046
IEA
GOA Databaseapoplast
GO:0009507
IEA
GOA Databasechloroplast
GO:0009941
IEA
GOA Databasechloroplast envelope
GO:0009570
IEA
GOA Databasechloroplast stroma
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily
IPR000860 Porphobilinogen deaminase
IPR022417 Porphobilinogen deaminase, N-terminal
IPR022418 Porphobilinogen deaminase, C-terminal
Mapman id Description
7.12.2.2 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase