Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0855 Trochodendron aralioides HOM05D005980 ORTHO05D007618 6.1e-294 1013.4 523 100.0
Nn3g20318 Nelumbo nucifera HOM05D005980 ORTHO05D007618 1.9e-239 832.4 533 78.8
GSVIVG01021555001 Vitis vinifera HOM05D005980 ORTHO05D007618 3.9e-232 808.1 512 77.9
Dinv21517 Davidia involucrata HOM05D005980 ORTHO05D007618 3.2e-226 788.5 525 77.1
Thecc.06G143900 Theobroma cacao HOM05D005980 ORTHO05D007618 5.2e-221 771.2 524 76.5
PSO675G5271 Papaver somniferum HOM05D005980 ORTHO05D007618 1.2e-220 770.0 532 75.6
PSO541G1780 Papaver somniferum HOM05D005980 ORTHO05D007618 1.7e-219 766.1 532 75.2
Aqoxy4G00005 Aquilegia oxysepala HOM05D005980 ORTHO05D007618 2.2e-219 765.8 507 75.7
CiPaw.09G119300 Carya illinoinensis HOM05D005980 ORTHO05D007618 1.6e-217 759.6 533 73.7
Gohir.D05G148400 Gossypium hirsutum HOM05D005980 ORTHO05D007618 1.3e-216 756.5 524 74.2
MSTRG.16268 Avicennia marina HOM05D005980 ORTHO05D007618 2.8e-214 748.8 537 73.7
PGR102G3344 Punica granatum HOM05D005980 ORTHO05D007618 2.8e-214 748.8 514 77.4
Prupe.4G086000 Prunus persica HOM05D005980 ORTHO05D007618 6.2e-214 747.7 535 72.1
COL.COLO4_31005 Corchorus olitorius HOM05D005980 ORTHO05D007618 2.6e-212 742.3 534 72.7
Oeu032723.1 Olea europaea HOM05D005980 ORTHO05D007618 2.6e-212 742.3 535 71.4
MD10G1257800 Malus domestica HOM05D005980 ORTHO05D007618 3.4e-212 741.9 536 71.5
Nitab4.5_0000869g0050 Nicotiana tabacum HOM05D005980 ORTHO05D007618 2.9e-211 738.8 534 71.9
PGSC0003DMG402021097 Solanum tuberosum HOM05D005980 ORTHO05D007618 2.9e-211 738.8 537 71.7
Haze_05690 Corylus avellana HOM05D005980 ORTHO05D007618 4.9e-211 738.0 590 66.1
Eucgr.D00262 Eucalyptus grandis HOM05D005980 ORTHO05D007618 1.1e-210 736.9 556 70.0
Sopen02g019470 Solanum pennellii HOM05D005980 ORTHO05D007618 1.9e-210 736.1 537 71.3
CSS0019737 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 2.4e-210 735.7 536 72.0
Solyc02g070390.3 Solanum lycopersicum HOM05D005980 ORTHO05D007618 3.2e-210 735.3 537 71.3
Ciclev10014878m.g Citrus clementina HOM05D005980 ORTHO05D007618 5.4e-210 734.6 534 72.7
CSS0007144 Camellia sinensis var. sinensis HOM05D005980 ORTHO05D007618 7.8e-209 730.7 536 72.2
Potri.001G358400 Populus trichocarpa HOM05D005980 ORTHO05D007618 1.5e-207 726.5 538 71.2
ClCG01G024920 Citrullus lanatus HOM05D005980 ORTHO05D007618 3.3e-207 725.3 536 70.0
Cc09_g08730 Coffea canephora HOM05D005980 ORTHO05D007618 3.3e-207 725.3 515 74.4
QL05p054997 Quercus lobata HOM05D005980 ORTHO05D007618 3.3e-207 725.3 531 71.9
RcHm_v2.0_Chr5g0014971 Rosa chinensis HOM05D005980 ORTHO05D007618 3.3e-207 725.3 556 68.3
CsaV3_6G052070 Cucumis sativus L. HOM05D005980 ORTHO05D007618 1.3e-206 723.4 535 69.0
FvH4_3g05000 Fragaria vesca HOM05D005980 ORTHO05D007618 1.4e-205 719.9 558 67.7
Actinidia13438 Actinidia chinensis HOM05D005980 ORTHO05D007618 1.5e-204 716.5 539 69.9
FAN11G3650 Fragaria x ananassa HOM05D005980 ORTHO05D007618 2.2e-203 712.6 565 66.4
Hma1.2p1_0586F.1_g183830 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 2.9e-203 712.2 467 77.1
Gohir.A05G146100 Gossypium hirsutum HOM05D005980 ORTHO05D007618 3.8e-203 711.8 524 71.0
MELO3C007103.2 Cucumis melo HOM05D005980 ORTHO05D007618 1.1e-202 710.3 553 66.7
FAN21G1725 Fragaria x ananassa HOM05D005980 ORTHO05D007618 3.2e-202 708.8 565 66.4
Gorai.009G152600 Gossypium raimondii HOM05D005980 ORTHO05D007618 7.1e-202 707.6 491 73.5
Lj1A1168T68 Lonicera japonica HOM05D005980 ORTHO05D007618 2.1e-201 706.1 504 72.6
Dinv32210 Davidia involucrata HOM05D005980 ORTHO05D007618 4.6e-201 704.9 441 81.2
Sabra16G0236200 Salix brachista HOM05D005980 ORTHO05D007618 4.6e-201 704.9 548 69.2
Sed0023515 Sechium edule HOM05D005980 ORTHO05D007618 3.9e-200 701.8 536 67.9
Peaxi162Scf00670g00346 Petunia axillaris HOM05D005980 ORTHO05D007618 5.1e-200 701.4 482 73.4
FAN16G3332 Fragaria x ananassa HOM05D005980 ORTHO05D007618 8.7e-200 700.7 527 68.9
DCAR_003883 Daucus carota HOM05D005980 ORTHO05D007618 4.3e-199 698.4 516 69.0
EL10Ac1g01827 Beta vulgaris HOM05D005980 ORTHO05D007618 6.2e-198 694.5 468 73.1
AUR62028384 Chenopodium quinoa HOM05D005980 ORTHO05D007618 5.8e-196 688.0 526 67.9
AUR62025366 Chenopodium quinoa HOM05D005980 ORTHO05D007618 7.6e-196 687.6 527 68.3
Sed0012577 Sechium edule HOM05D005980 ORTHO05D007618 2.2e-195 686.0 536 67.0
ATR1098G083 Amborella trichopoda HOM05D005980 ORTHO05D007618 1.4e-194 683.3 522 68.6
Manes.15G125300 Manihot esculenta HOM05D005980 ORTHO05D007618 2.4e-194 682.6 449 78.2
Nitab4.5_0005963g0020 Nicotiana tabacum HOM05D005980 ORTHO05D007618 5.5e-194 681.4 540 67.2
TWI73G1267 Tripterygium wilfordii HOM05D005980 ORTHO05D007618 3.0e-192 675.6 508 67.7
CANSAT35G0447 Cannabis sativa HOM05D005980 ORTHO05D007618 1.5e-191 673.3 544 67.1
arahy.Tifrunner.gnm1.ann1.PI6078 Arachis hypogaea HOM05D005980 ORTHO05D007618 5.6e-191 671.4 515 70.1
arahy.Tifrunner.gnm1.ann1.G1ZF0U Arachis hypogaea HOM05D005980 ORTHO05D007618 1.3e-190 670.2 515 69.9
Glyma.13G221300 Glycine max HOM05D005980 ORTHO05D007618 2.1e-190 669.5 511 70.5
Migut.M01863 Erythranthe guttata HOM05D005980 ORTHO05D007618 8.2e-190 667.5 540 65.6
SalBow8G1809 Salvia bowleyana HOM05D005980 ORTHO05D007618 3.1e-189 665.6 532 67.5
SGA_v2.0_scaffold51G18642 Striga asiatica HOM05D005980 ORTHO05D007618 2.2e-187 659.4 524 66.4
Psat1g191560 Pisum sativum HOM05D005980 ORTHO05D007618 2.9e-187 659.1 530 67.4
THA.LOC104820671 Tarenaya hassleriana HOM05D005980 ORTHO05D007618 1.4e-186 656.8 543 66.1
Aa31LG10G6710 Aethionema arabicum HOM05D005980 ORTHO05D007618 3.2e-186 655.6 539 64.6
VMungo0540G0170 Vigna mungo HOM05D005980 ORTHO05D007618 9.3e-186 654.1 523 67.9
Rhsim13G0118300 Rhododendron simsii HOM05D005980 ORTHO05D007618 1.2e-185 653.7 539 66.8
Phvul.006G168100 Phaseolus vulgaris HOM05D005980 ORTHO05D007618 1.0e-184 650.6 512 67.0
Lj6g0019056 Lotus japonicus HOM05D005980 ORTHO05D007618 1.8e-184 649.8 503 69.8
AL4G30630 Arabidopsis lyrata HOM05D005980 ORTHO05D007618 8.2e-182 641.0 545 63.3
Lalb_Chr18g0055171 Lupinus albus HOM05D005980 ORTHO05D007618 8.2e-182 641.0 516 67.1
Medtr2g018740 Medicago truncatula HOM05D005980 ORTHO05D007618 1.1e-181 640.6 536 66.2
AT2G34640 Arabidopsis thaliana HOM05D005980 ORTHO05D007618 3.1e-181 639.0 543 63.4
A05p11020 Brassica napus HOM05D005980 ORTHO05D007618 6.9e-181 637.9 535 63.9
BraA05t20047Z Brassica rapa HOM05D005980 ORTHO05D007618 1.5e-180 636.7 535 63.7
BcaC02g11540 Brassica carinata HOM05D005980 ORTHO05D007618 2.0e-180 636.3 538 63.9
C04p14140 Brassica napus HOM05D005980 ORTHO05D007618 2.0e-180 636.3 538 63.9
BolC4t23002H Brassica oleracea HOM05D005980 ORTHO05D007618 2.0e-180 636.3 538 63.9
TPR.G26225 Trifolium pratense HOM05D005980 ORTHO05D007618 3.4e-180 635.6 547 63.8
FAN25G0178 Fragaria x ananassa HOM05D005980 ORTHO05D007618 2.2e-179 632.9 552 62.5
Carub.0004s1633 Capsella rubella HOM05D005980 ORTHO05D007618 6.5e-179 631.3 545 61.8
HanXRQChr10g0301191 Helianthus annuus HOM05D005980 ORTHO05D007618 1.3e-176 623.6 528 64.2
Lj2C323G3 Lonicera japonica HOM05D005980 ORTHO05D007618 2.3e-176 622.9 498 66.7
Sc05g0005970 Simmondsia chinensis HOM05D005980 ORTHO05D007618 6.7e-176 621.3 453 68.9
CARHR128740 Cardamine hirsuta HOM05D005980 ORTHO05D007618 3.3e-175 619.0 547 61.8
Ca_00513_v3 Cicer arietinum L. HOM05D005980 ORTHO05D007618 1.3e-174 617.1 462 71.0
Lsat_1_v5_gn_9_33800 Lactuca sativa HOM05D005980 ORTHO05D007618 6.3e-174 614.8 513 64.5
Thhalv10016502m.g Eutrema salsugineum HOM05D005980 ORTHO05D007618 1.2e-172 610.5 540 61.9
Ah.12g059810 Amaranthus hybridus HOM05D005980 ORTHO05D007618 3.8e-171 605.5 467 68.7
Sp4g16910 Schrenkiella parvula HOM05D005980 ORTHO05D007618 3.8e-171 605.5 460 67.6
vmacro03427 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 1.5e-167 593.6 428 70.6
unitig_578.g16128 Utricularia gibba HOM05D005980 ORTHO05D007618 3.4e-164 582.4 532 58.8
BcaNung07262 Brassica carinata HOM05D005980 ORTHO05D007618 9.7e-159 564.3 430 68.6
ECA247G3302 Erigeron canadensis HOM05D005980 ORTHO05D007618 2.9e-155 552.7 461 62.0
Os01g0769900 Oryza sativa ssp. japonica HOM05D005980 ORTHO05D007618 6.5e-155 551.6 559 57.1
Zm00001eb152010 Zea mays HOM05D005980 ORTHO05D007618 2.7e-153 546.2 502 59.0
HPP92_001893 Vanilla planifolia HOM05D005980 ORTHO05D007618 3.0e-115 419.9 398 58.3
MD05G1278700 Malus domestica HOM05D005980 ORTHO05D007618 5.8e-111 405.6 296 70.6
MBI02_g18932_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 9.9e-103 378.3 264 72.7
Hma1.2p1_0586F.1_g183820 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 2.4e-96 357.1 266 69.2
Cpa.g.sc17.57 Carica papaya HOM05D005980 ORTHO05D007618 1.8e-88 330.9 265 66.0
AagrBONN_evm.TU.Sc2ySwM_228.94 Anthoceros agrestis HOM05D005980 ORTHO05D007618 7.6e-87 325.5 507 41.2
CDE01G0059 Ceratophyllum demersum HOM05D005980 ORTHO05D007618 4.2e-85 319.7 309 57.9
Cpa.g.sc17.56 Carica papaya HOM05D005980 ORTHO05D007618 1.2e-79 301.6 167 85.0
Mapoly0061s0053 Marchantia polymorpha HOM05D005980 ORTHO05D007618 2.9e-78 297.0 418 41.1
Cpa.g.c47879 Carica papaya HOM05D005980 ORTHO05D007618 5.1e-75 286.2 198 72.2
Pp3c3_26950 Physcomitrium patens HOM05D005980 ORTHO05D007618 4.6e-68 263.1 423 38.1
Pp3c10_12300 Physcomitrium patens HOM05D005980 ORTHO05D007618 1.1e-66 258.5 381 40.4
arahy.Tifrunner.gnm1.ann1.D5DAI6 Arachis hypogaea HOM05D005980 ORTHO05D007618 8.2e-57 225.7 262 50.4
SGA_v2.0_scaffold230G43391 Striga asiatica HOM05D005980 ORTHO05D007618 9.1e-56 222.2 125 78.4
Hma1.2p1_0581F.1_g182930 Hydrangea macrophylla HOM05D005980 ORTHO05D007618 1.7e-54 218.0 148 75.0
SGA_v2.0_scaffold6G03478 Striga asiatica HOM05D005980 ORTHO05D007618 1.1e-53 215.3 125 79.2
HPP92_001892 Vanilla planifolia HOM05D005980 ORTHO05D007618 4.7e-52 209.9 167 71.3
Lsat_1_v5_gn_1_94041 Lactuca sativa HOM05D005980 ORTHO05D007618 1.4e-48 198.4 192 54.2
CBR_g48045 Chara braunii HOM05D005980 ORTHO05D007618 4.7e-44 183.3 247 41.7
SEGI_30301 Sequoiadendron giganteum HOM05D005980 ORTHO05D007618 1.2e-36 158.7 252 41.3
MD05G1278800 Malus domestica HOM05D005980 ORTHO05D007618 4.8e-33 146.7 80 82.5
Cpa.g.sc17.55 Carica papaya HOM05D005980 ORTHO05D007618 1.8e-32 144.8 109 71.6
Glyma.15G091200 Glycine max HOM05D005980 ORTHO05D007618 4.1e-24 117.1 128 53.9
MBI02_g26594_MAGBIO Magnolia biondii HOM05D005980 ORTHO05D007618 1.6e-23 115.2 83 73.5
HanXRQChr10g0301121 Helianthus annuus HOM05D005980 ORTHO05D007618 3.6e-20 104.0 71 64.8
Haze_05663 Corylus avellana HOM05D005980 ORTHO05D007618 4.0e-19 100.5 114 50.0
arahy.Tifrunner.gnm1.ann1.MPA65D Arachis hypogaea HOM05D005980 ORTHO05D007618 1.2e-18 99.0 53 84.9
vmacro03428 Vaccinium macrocarpon HOM05D005980 ORTHO05D007618 9.2e-16 89.4 102 57.8
Actinidia33673 Actinidia chinensis HOM05D005980 ORTHO05D007618 2.3e-14 84.7 131 45.8
Lsat_1_v5_gn_1_94021 Lactuca sativa HOM05D005980 ORTHO05D007618 5.0e-14 83.6 146 43.8
Actinidia33672 Actinidia chinensis HOM05D005980 ORTHO05D007618 1.1e-13 82.4 77 59.7
Lsat_1_v5_gn_7_71901 Lactuca sativa HOM05D002457 ORTHO05D005750 2.5e-13 81.3 93 46.2
MSTRG.16269 Avicennia marina HOM05D005980 ORTHO05D007618 8.0e-12 76.3 44 70.5
MD05G1278900 Malus domestica HOM05D005980 ORTHO05D007618 4.0e-11 73.9 53 75.5
Cpa.g.c48158 Carica papaya HOM05D005980 ORTHO05D007618 6.4e-09 66.6 32 93.8


User provided reference genes

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