Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR626G0096 Trochodendron aralioides HOM05D001257 ORTHO05D005285 2.1e-116 422.5 238 100.0
TAR636G1999 Trochodendron aralioides HOM05D001257 ORTHO05D005285 1.7e-89 333.2 191 95.3
TAR376G0293 Trochodendron aralioides HOM05D001257 ORTHO05D005285 1.9e-69 266.5 207 73.9
TAR629G2153 Trochodendron aralioides HOM05D001257 ORTHO05D005285 1.2e-60 237.3 174 79.3
MBI04_g06279_MAGBIO Magnolia biondii HOM05D001257 ORTHO05D005285 6.6e-54 214.9 191 64.4
TAR629G0464 Trochodendron aralioides HOM05D001257 ORTHO05D005285 2.5e-53 213.0 190 64.7
Dinv43959 Davidia involucrata HOM05D001257 ORTHO05D005285 7.0e-48 194.9 192 60.4
GSVIVG01019326001 Vitis vinifera HOM05D001257 ORTHO05D005285 3.0e-46 189.5 192 59.4
Cfa003701 Carpinus fangiana HOM05D001257 ORTHO05D005285 3.3e-45 186.0 191 57.6
Haze_15785 Corylus avellana HOM05D001257 ORTHO05D005285 7.3e-45 184.9 191 57.1
CSS0044214 Camellia sinensis var. sinensis HOM05D001257 ORTHO05D005285 3.6e-44 182.6 192 57.3
CSS0002041 Camellia sinensis var. sinensis HOM05D001257 ORTHO05D005285 2.3e-43 179.9 192 56.8
FAN26G0327 Fragaria x ananassa HOM05D001257 ORTHO05D005285 2.9e-41 172.9 192 53.6
FAN28G2274 Fragaria x ananassa HOM05D001257 ORTHO05D005285 2.9e-41 172.9 193 53.4
FvH4_1g29160 Fragaria vesca HOM05D001257 ORTHO05D005285 1.9e-40 170.2 192 53.1
FAN19G1721 Fragaria x ananassa HOM05D001257 ORTHO05D005285 1.9e-40 170.2 192 53.1
Gohir.A11G301900 Gossypium hirsutum HOM05D001257 ORTHO05D005285 1.9e-40 170.2 194 52.1
QL04p053420 Quercus lobata HOM05D001257 ORTHO05D005285 3.2e-40 169.5 192 55.2
Gorai.007G347300 Gossypium raimondii HOM05D001257 ORTHO05D005285 5.4e-40 168.7 194 52.1
FAN23G0959 Fragaria x ananassa HOM05D001257 ORTHO05D005285 1.2e-39 167.5 192 53.1
Gohir.D11G317500 Gossypium hirsutum HOM05D001257 ORTHO05D005285 2.7e-39 166.4 194 51.5
ATR0568G007 Amborella trichopoda HOM05D001257 ORTHO05D005285 3.5e-39 166.0 192 53.6
Atru.chr2.1632 Acer truncatum HOM05D001257 ORTHO05D005285 4.6e-39 165.6 192 53.6
Peaxi162Scf00245g00416 Petunia axillaris HOM05D001257 ORTHO05D005285 6.0e-39 165.2 193 55.4
CSS0043707 Camellia sinensis var. sinensis HOM05D001257 ORTHO05D005285 1.3e-38 164.1 192 54.2
Aqoxy7G00897 Aquilegia oxysepala HOM05D001257 ORTHO05D005285 1.7e-38 163.7 190 55.8
Nitab4.5_0000050g0200 Nicotiana tabacum HOM05D001257 ORTHO05D005285 1.7e-38 163.7 194 55.7
Prupe.7G021900 Prunus persica HOM05D001257 ORTHO05D005285 8.6e-38 161.4 192 51.6
Ciclev10030998m.g Citrus clementina HOM05D001257 ORTHO05D005285 3.3e-37 159.5 192 53.1
MD12G1111900 Malus domestica HOM05D001257 ORTHO05D005285 3.3e-37 159.5 194 51.0
Nitab4.5_0000792g0120 Nicotiana tabacum HOM05D001257 ORTHO05D005285 3.3e-37 159.5 197 49.7
Duzib128G0739 Durio zibethinus HOM05D001257 ORTHO05D005285 1.2e-36 157.5 184 54.3
Duzib177G0233 Durio zibethinus HOM05D001257 ORTHO05D005285 1.6e-36 157.1 193 52.3
Eucgr.D01094 Eucalyptus grandis HOM05D001257 ORTHO05D005285 3.6e-36 156.0 192 51.0
Thecc.05G235100 Theobroma cacao HOM05D001257 ORTHO05D005285 8.1e-36 154.8 193 51.3
Nitab4.5_0007787g0010 Nicotiana tabacum HOM05D001257 ORTHO05D005285 1.4e-35 154.1 197 48.7
Oeu060723.2 Olea europaea HOM05D001257 ORTHO05D005285 3.1e-35 152.9 193 51.8
Oeu060725.1 Olea europaea HOM05D001257 ORTHO05D005285 3.1e-35 152.9 193 51.8
PGR083G0338 Punica granatum HOM05D001257 ORTHO05D005285 6.8e-35 151.8 195 50.8
Actinidia31731 Actinidia chinensis HOM05D001257 ORTHO05D005285 1.2e-34 151.0 192 51.6
Oeu023373.1 Olea europaea HOM05D001257 ORTHO05D005285 4.4e-34 149.1 192 51.0
TWI60G0695 Tripterygium wilfordii HOM05D001257 ORTHO05D005285 9.9e-34 147.9 194 50.5
Manes.08G156300 Manihot esculenta HOM05D001257 ORTHO05D005285 1.3e-33 147.5 192 47.4
Actinidia05831 Actinidia chinensis HOM05D001257 ORTHO05D005285 2.2e-33 146.7 194 51.5
Peaxi162Scf00907g00024 Petunia axillaris HOM05D001257 ORTHO05D005285 2.2e-33 146.7 197 47.7
ClCG06G000590 Citrullus lanatus HOM05D001257 ORTHO05D005285 6.4e-33 145.2 189 50.3
CAN.G992.26 Capsicum annuum HOM05D001257 ORTHO05D005285 1.9e-32 143.7 197 46.7
PGSC0003DMG400031111 Solanum tuberosum HOM05D001257 ORTHO05D005285 3.2e-32 142.9 193 48.2
arahy.Tifrunner.gnm1.ann1.G50W54 Arachis hypogaea HOM05D001257 ORTHO05D005285 4.2e-32 142.5 194 51.0
arahy.Tifrunner.gnm1.ann1.TRW5Y6 Arachis hypogaea HOM05D001257 ORTHO05D005285 4.2e-32 142.5 194 51.0
Solyc01g081490.3 Solanum lycopersicum HOM05D001257 ORTHO05D005285 9.2e-32 141.4 193 48.2
Sopen01g033050 Solanum pennellii HOM05D001257 ORTHO05D005285 9.2e-32 141.4 193 48.2
Dinv43518 Davidia involucrata HOM05D001257 ORTHO05D005285 1.2e-31 141.0 129 62.0
MELO3C022483.2 Cucumis melo HOM05D001257 ORTHO05D005285 1.6e-31 140.6 188 48.4
Glyma.06G001600 Glycine max HOM05D001257 ORTHO05D005285 1.6e-31 140.6 195 50.8
RcHm_v2.0_Chr3g0494481 Rosa chinensis HOM05D001257 ORTHO05D005285 2.1e-31 140.2 192 46.4
CiPaw.02G047400 Carya illinoinensis HOM05D001257 ORTHO05D005285 2.7e-31 139.8 191 48.2
Gohir.D08G238200 Gossypium hirsutum HOM05D001257 ORTHO05D005285 2.7e-31 139.8 193 48.7
Phvul.007G142900 Phaseolus vulgaris HOM05D001816 ORTHO05D002001 4.6e-31 139.0 195 50.8
CsaV3_6G006360 Cucumis sativus L. HOM05D001257 ORTHO05D005285 6.0e-31 138.7 188 47.3
MD14G1100900 Malus domestica HOM05D001257 ORTHO05D005285 7.8e-31 138.3 192 46.4
CANSAT25G0177 Cannabis sativa HOM05D001257 ORTHO05D005285 2.3e-30 136.7 192 47.4
Gohir.A08G221600 Gossypium hirsutum HOM05D001257 ORTHO05D005285 2.3e-30 136.7 193 47.7
Ah.05g177090 Amaranthus hybridus HOM05D000308 ORTHO05D005285 3.9e-30 136.0 192 44.3
VMungo1309G1885 Vigna mungo HOM05D001257 ORTHO05D005285 3.9e-30 136.0 191 49.2
Gorai.004G253700 Gossypium raimondii HOM05D001257 ORTHO05D005285 1.5e-29 134.0 193 46.6
arahy.Tifrunner.gnm1.ann1.S11LVZ Arachis hypogaea HOM05D001257 ORTHO05D005285 2.5e-29 133.3 194 49.0
EL10Ac7g16125 Beta vulgaris HOM05D001257 ORTHO05D005285 2.5e-29 133.3 189 46.0
Sed0009327 Sechium edule HOM05D001257 ORTHO05D005285 2.5e-29 133.3 190 46.3
Lalb_Chr11g0061211 Lupinus albus HOM05D001257 ORTHO05D005285 3.3e-29 132.9 196 46.9
PSO675G9043 Papaver somniferum HOM05D001257 ORTHO05D005285 1.2e-28 131.0 190 47.4
Nitab4.5_0003123g0050 Nicotiana tabacum HOM05D001257 ORTHO05D005285 2.1e-28 130.2 194 47.4
Sed0002912 Sechium edule HOM05D001257 ORTHO05D005285 6.2e-28 128.6 191 45.5
AUR62038029 Chenopodium quinoa HOM05D001257 ORTHO05D005285 1.8e-27 127.1 193 44.0
SGA_v2.0_scaffold98G29372 Striga asiatica HOM05D001257 ORTHO05D005285 4.4e-26 122.5 194 43.3
Sabra19G0054600 Salix brachista HOM05D001257 ORTHO05D005285 7.6e-26 121.7 189 43.4
Potri.019G044200 Populus trichocarpa HOM05D001257 ORTHO05D005285 9.9e-26 121.3 191 44.0
DCAR_015732 Daucus carota HOM05D001257 ORTHO05D005285 4.9e-25 119.0 192 45.8
Ca_15282_v3 Cicer arietinum L. HOM05D001257 ORTHO05D005285 6.4e-25 118.6 191 43.5
Ca_15418_v3 Cicer arietinum L. HOM05D006927 ORTHO05D009065 6.4e-25 118.6 191 43.5
Carub.0001s0790 Capsella rubella HOM05D001257 ORTHO05D005285 1.1e-24 117.9 194 42.3
AT1G08540 Arabidopsis thaliana HOM05D001257 ORTHO05D005285 1.4e-24 117.5 195 42.6
AL1G18970 Arabidopsis lyrata HOM05D001257 ORTHO05D005285 1.9e-24 117.1 195 42.6
Lj9A617T59 Lonicera japonica HOM05D001257 ORTHO05D005285 2.4e-24 116.7 194 44.8
Sp1g07200 Schrenkiella parvula HOM05D001257 ORTHO05D005285 3.2e-24 116.3 198 41.9
PSO502G0019 Papaver somniferum HOM05D001257 ORTHO05D005285 9.3e-24 114.8 190 43.7
Sabra13G0061300 Salix brachista HOM05D001257 ORTHO05D005285 9.3e-24 114.8 189 42.9
Cc02_g26490 Coffea canephora HOM05D001257 ORTHO05D005285 1.2e-23 114.4 194 41.8
Migut.B01418 Erythranthe guttata HOM05D001257 ORTHO05D005285 1.6e-23 114.0 195 43.6
Potri.013G070500 Populus trichocarpa HOM05D001257 ORTHO05D005285 1.6e-23 114.0 189 42.3
Aa31sc20G100 Aethionema arabicum HOM05D001257 ORTHO05D005285 2.1e-23 113.6 194 41.2
Thhalv10007187m.g Eutrema salsugineum HOM05D001257 ORTHO05D005285 7.8e-23 111.7 204 40.2
DCAR_029568 Daucus carota HOM05D001257 ORTHO05D005285 1.7e-22 110.5 194 42.8
BcaB03g13326 Brassica carinata HOM05D001257 ORTHO05D005285 3.0e-22 109.8 191 41.9
CARHR008440 Cardamine hirsuta HOM05D001257 ORTHO05D005285 3.9e-22 109.4 197 42.1
SalBow5G2044 Salvia bowleyana HOM05D001257 ORTHO05D005285 3.9e-22 109.4 153 42.5
Glyma.04G002000 Glycine max HOM05D001257 ORTHO05D005285 5.1e-22 109.0 195 42.6
MSTRG.17080 Avicennia marina HOM05D001257 ORTHO05D005285 1.9e-21 107.1 198 38.9
THA.LOC104805804 Tarenaya hassleriana HOM05D001257 ORTHO05D005285 1.9e-21 107.1 191 42.4
Medtr3g118290 Medicago truncatula HOM05D001257 ORTHO05D005285 3.3e-21 106.3 193 42.5
Lj7A560T38 Lonicera japonica HOM05D001257 ORTHO05D005285 4.3e-21 105.9 191 45.0
THA.LOC104825382 Tarenaya hassleriana HOM05D001257 ORTHO05D005285 5.6e-21 105.5 194 38.1
DCAR_025002 Daucus carota HOM05D001257 ORTHO05D005285 7.3e-21 105.1 192 40.6
C05p06640 Brassica napus HOM05D001257 ORTHO05D005285 1.3e-20 104.4 203 39.4
BolC5t29424H Brassica oleracea HOM05D001257 ORTHO05D005285 1.3e-20 104.4 203 39.4
MSTRG.20627 Avicennia marina HOM05D001257 ORTHO05D005285 2.8e-20 103.2 155 41.9
vmacro13600 Vaccinium macrocarpon HOM05D001257 ORTHO05D005285 1.1e-19 101.3 192 41.7
A08p35090 Brassica napus HOM05D001257 ORTHO05D005285 2.4e-19 100.1 192 41.1
TPR.G38555 Trifolium pratense HOM05D001257 ORTHO05D005285 4.0e-19 99.4 197 39.6
BcaB07g34097 Brassica carinata HOM05D001257 ORTHO05D005285 5.3e-19 99.0 203 38.4
Rhsim05G0005800 Rhododendron simsii HOM05D001257 ORTHO05D005285 2.0e-18 97.1 195 40.0
CDE06G1794 Ceratophyllum demersum HOM05D001257 ORTHO05D005285 2.6e-18 96.7 181 42.5
CDE07G1121 Ceratophyllum demersum HOM05D001257 ORTHO05D005285 4.5e-18 95.9 182 43.4
HPP92_007231 Vanilla planifolia HOM05D001257 ORTHO05D005285 5.8e-18 95.5 199 39.7
A06p05530 Brassica napus HOM05D001257 ORTHO05D005285 1.3e-17 94.4 198 38.4
BraA06t23761Z Brassica rapa HOM05D001257 ORTHO05D005285 1.3e-17 94.4 197 38.6
BraA08t35418Z Brassica rapa HOM05D001257 ORTHO05D005285 2.2e-17 93.6 193 39.4
Sc02g0003440 Simmondsia chinensis HOM05D001257 ORTHO05D005285 2.2e-17 93.6 141 41.8
BolC8t48835H Brassica oleracea HOM05D001257 ORTHO05D005285 2.9e-17 93.2 193 39.9
Hund26915 Selenicereus undatus HOM05D001257 ORTHO05D005285 3.8e-17 92.8 132 40.9
Hma1.2p1_0128F.1_g060050 Hydrangea macrophylla HOM05D001257 ORTHO05D005285 1.1e-16 91.3 85 61.2
BcaC07g38400 Brassica carinata HOM05D001257 ORTHO05D005285 1.9e-16 90.5 193 39.4
C08p11560 Brassica napus HOM05D001257 ORTHO05D005285 1.9e-16 90.5 193 39.4
AUR62014506 Chenopodium quinoa HOM05D001257 ORTHO05D005285 7.1e-16 88.6 127 43.3
Lj1g0012627 Lotus japonicus HOM05D001257 ORTHO05D005285 7.9e-15 85.1 191 37.2
Psat5g001080 Pisum sativum HOM05D001257 ORTHO05D005285 8.1e-12 75.1 194 33.0
unitig_0.g1361 Utricularia gibba HOM05D001257 ORTHO05D005285 5.3e-11 72.4 58 60.3
SEGI_00405 Sequoiadendron giganteum HOM05D001257 ORTHO05D005285 1.5e-10 70.9 185 36.2
RcHm_v2.0_Chr3g0494351 Rosa chinensis HOM05D001257 ORTHO05D005285 7.6e-10 68.6 97 44.3
HPP92_008350 Vanilla planifolia HOM05D001257 ORTHO05D005285 1.1e-08 64.7 188 33.0
Gohir.D11G317450 Gossypium hirsutum HOM05D001257 ORTHO05D005285 3.2e-08 63.2 87 49.4
HanXRQChr04g0117681 Helianthus annuus HOM05D001257 ORTHO05D005285 2.3e-06 57.0 179 33.0
ECA236G3956 Erigeron canadensis HOM05D001257 ORTHO05D005285 5.1e-06 55.8 185 33.5


User provided reference genes

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