Gene: CSS0043707
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0043707
- Transcript Identifier CSS0043707.1
- Gene Type Coding gene
- Location Chr3 : 134057821-134066944 : negative
Gene Family Information
- ID HOM05D001257
- #Genes/#Species 497/99
- Phylogenetic origin
- ID ORTHO05D005285
- #Genes/#Species 160/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid CSS0043707.1
Descriptions
- Description PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Eucalyptus grandis]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006352 | IEA | InterPro | DNA-templated transcription, initiation | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR014284 | RNA polymerase sigma-70 like domain |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR013325 | RNA polymerase sigma factor, region 2 |
| IPR000943 | RNA polymerase sigma-70 |
| IPR007627 | RNA polymerase sigma-70 region 2 |
| IPR007624 | RNA polymerase sigma-70 region 3 |
| IPR013324 | RNA polymerase sigma factor, region 3/4-like |
| IPR007630 | RNA polymerase sigma-70 region 4 |
| IPR016262 | RNA polymerase sigma factor, SigB/C/D/F, plastid |
| Mapman id | Description |
|---|---|
| 15.6.2.1 | RNA biosynthesis.organelle machinery.transcriptional regulation.basal transcription factor (Sigma) |