Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR625G0121 Trochodendron aralioides HOM05D004433 ORTHO05D005251 1.7e-57 225.7 108 100.0
TAR639G0002 Trochodendron aralioides HOM05D004433 ORTHO05D005251 4.1e-11 71.6 40 87.5
CAN.G1444.6 Capsicum annuum HOM05D004433 ORTHO05D005251 1.2e-10 70.1 40 87.5
Actinidia14688 Actinidia chinensis HOM05D004433 ORTHO05D005251 2.0e-10 69.3 40 85.0
Actinidia18212 Actinidia chinensis HOM05D004433 ORTHO05D005251 2.0e-10 69.3 40 85.0
Dinv23396 Davidia involucrata HOM05D004433 ORTHO05D005251 2.6e-10 68.9 40 85.0
ATR0705G146 Amborella trichopoda HOM05D004433 ORTHO05D005251 3.5e-10 68.6 40 82.5
CSS0005257 Camellia sinensis var. sinensis HOM05D004433 ORTHO05D005251 3.5e-10 68.6 40 85.0
CSS0005508 Camellia sinensis var. sinensis HOM05D004433 ORTHO05D005251 3.5e-10 68.6 40 85.0
Lj8A567T31 Lonicera japonica HOM05D004433 ORTHO05D005251 3.5e-10 68.6 40 85.0
Manes.16G073200 Manihot esculenta HOM05D004433 ORTHO05D005251 3.5e-10 68.6 40 85.0
Nitab4.5_0008242g0010 Nicotiana tabacum HOM05D004433 ORTHO05D005251 3.5e-10 68.6 40 82.5
vmacro00182 Vaccinium macrocarpon HOM05D004433 ORTHO05D005251 3.5e-10 68.6 40 85.0
DCAR_003083 Daucus carota HOM05D004433 ORTHO05D005251 4.5e-10 68.2 40 82.5
Nn8g39044 Nelumbo nucifera HOM05D004433 ORTHO05D005251 4.5e-10 68.2 40 85.0
Solyc08g066180.3 Solanum lycopersicum HOM05D004433 ORTHO05D005251 4.5e-10 68.2 40 85.0
Sopen08g019860 Solanum pennellii HOM05D004433 ORTHO05D005251 4.5e-10 68.2 40 85.0
GSVIVG01035316001 Vitis vinifera HOM05D004433 ORTHO05D005251 4.5e-10 68.2 40 85.0
Cfa013388 Carpinus fangiana HOM05D004433 ORTHO05D005251 5.9e-10 67.8 40 82.5
Peaxi162Scf00699g00520 Petunia axillaris HOM05D004433 ORTHO05D005251 5.9e-10 67.8 39 84.6
PSO210G0672 Papaver somniferum HOM05D004433 ORTHO05D005251 7.7e-10 67.4 40 82.5
PSO210G3373 Papaver somniferum HOM05D004433 ORTHO05D005251 7.7e-10 67.4 40 82.5
Hund03376 Selenicereus undatus HOM05D004433 ORTHO05D005251 7.7e-10 67.4 40 85.0
TWI34G1917 Tripterygium wilfordii HOM05D004433 ORTHO05D005251 7.7e-10 67.4 40 80.0
CARHR115360 Cardamine hirsuta HOM05D004433 ORTHO05D005251 1.0e-09 67.0 40 80.0
Eucgr.C00613 Eucalyptus grandis HOM05D004433 ORTHO05D005251 1.0e-09 67.0 40 80.0
QL12p040912 Quercus lobata HOM05D004433 ORTHO05D005251 1.0e-09 67.0 40 80.0
Ca_03360_v3 Cicer arietinum L. HOM05D004433 ORTHO05D005251 1.3e-09 66.6 40 82.5
Ca_19223_v3 Cicer arietinum L. HOM05D004433 ORTHO05D005251 1.3e-09 66.6 40 82.5
MBI04_g07004_MAGBIO Magnolia biondii HOM05D004433 ORTHO05D005251 1.3e-09 66.6 40 80.0
Rhsim11G0049500 Rhododendron simsii HOM05D004433 ORTHO05D005251 1.3e-09 66.6 40 80.0
Carub.0004s0569 Capsella rubella HOM05D004433 ORTHO05D005251 1.7e-09 66.2 40 80.0
ECA233G5497 Erigeron canadensis HOM05D004433 ORTHO05D005251 1.7e-09 66.2 40 77.5
Thhalv10001936m.g Eutrema salsugineum HOM05D004433 ORTHO05D005251 1.7e-09 66.2 40 80.0
MD08G1110200 Malus domestica HOM05D004433 ORTHO05D005251 1.7e-09 66.2 40 80.0
Manes.03G060700 Manihot esculenta HOM05D004433 ORTHO05D005251 1.7e-09 66.2 40 82.5
Oeu019243.1 Olea europaea HOM05D004433 ORTHO05D005251 1.7e-09 66.2 40 80.0
Prupe.1G444400 Prunus persica HOM05D004433 ORTHO05D005251 1.7e-09 66.2 40 80.0
PGR031G3150 Punica granatum HOM05D004433 ORTHO05D005251 1.7e-09 66.2 40 80.0
arahy.Tifrunner.gnm1.ann1.AK26AV Arachis hypogaea HOM05D004433 ORTHO05D005251 2.2e-09 65.9 40 80.0
arahy.Tifrunner.gnm1.ann1.YGB7WG Arachis hypogaea HOM05D004433 ORTHO05D005251 2.2e-09 65.9 40 80.0
Cc08_g09950 Coffea canephora HOM05D004433 ORTHO05D005251 2.2e-09 65.9 40 82.5
BcaB06g29637 Brassica carinata HOM05D004433 ORTHO05D005251 2.9e-09 65.5 40 77.5
A04p20080 Brassica napus HOM05D004433 ORTHO05D005251 2.9e-09 65.5 40 77.5
C04p55760 Brassica napus HOM05D004433 ORTHO05D005251 2.9e-09 65.5 40 77.5
BolC4t27102H Brassica oleracea HOM05D004433 ORTHO05D005251 2.9e-09 65.5 40 77.5
BraA04t17590Z Brassica rapa HOM05D004433 ORTHO05D005251 2.9e-09 65.5 40 77.5
Lalb_Chr22g0360911 Lupinus albus HOM05D004433 ORTHO05D005251 2.9e-09 65.5 40 80.0
AT2G25870 Arabidopsis thaliana HOM05D004433 ORTHO05D005251 3.8e-09 65.1 40 77.5
AUR62009222 Chenopodium quinoa HOM05D004433 ORTHO05D005251 3.8e-09 65.1 40 77.5
AUR62040221 Chenopodium quinoa HOM05D004433 ORTHO05D005251 3.8e-09 65.1 40 77.5
Sp4g05710 Schrenkiella parvula HOM05D004433 ORTHO05D005251 3.8e-09 65.1 40 77.5
MSTRG.25921 Avicennia marina HOM05D004433 ORTHO05D005251 5.0e-09 64.7 40 77.5
Ciclev10007803m.g Citrus clementina HOM05D004433 ORTHO05D005251 5.0e-09 64.7 40 77.5
Potri.018G057500 Populus trichocarpa HOM05D004433 ORTHO05D005251 5.0e-09 64.7 40 77.5
Sabra18G0052000 Salix brachista HOM05D004433 ORTHO05D005251 5.0e-09 64.7 40 77.5
SGA_v2.0_scaffold103G30047 Striga asiatica HOM05D004433 ORTHO05D005251 5.0e-09 64.7 44 68.2
TPR.G24519 Trifolium pratense HOM05D004433 ORTHO05D005251 5.0e-09 64.7 40 77.5
AL4G17700 Arabidopsis lyrata HOM05D004433 ORTHO05D005251 6.5e-09 64.3 40 77.5
CDE02G1264 Ceratophyllum demersum HOM05D004433 ORTHO05D005251 6.5e-09 64.3 40 77.5
CDE09G0966 Ceratophyllum demersum HOM05D004433 ORTHO05D005251 6.5e-09 64.3 40 77.5
ClCG11G015050 Citrullus lanatus HOM05D004433 ORTHO05D005251 6.5e-09 64.3 40 82.5
HanXRQChr02g0047921 Helianthus annuus HOM05D004433 ORTHO05D005251 6.5e-09 64.3 40 77.5
Medtr1g007320 Medicago truncatula HOM05D004433 ORTHO05D005251 6.5e-09 64.3 40 77.5
RcHm_v2.0_Chr6g0306711 Rosa chinensis HOM05D004433 ORTHO05D005251 6.5e-09 64.3 40 77.5
Sed0005675 Sechium edule HOM05D004433 ORTHO05D005251 6.5e-09 64.3 40 82.5
THA.LOC104818595 Tarenaya hassleriana HOM05D004433 ORTHO05D005251 6.5e-09 64.3 40 75.0
Thecc.09G048300 Theobroma cacao HOM05D004433 ORTHO05D005251 6.5e-09 64.3 40 77.5
BcaB06g29638 Brassica carinata HOM05D004433 ORTHO05D005251 8.5e-09 63.9 40 75.0
FvH4_2g35220 Fragaria vesca HOM05D004433 ORTHO05D005251 8.5e-09 63.9 40 77.5
FAN15G1676 Fragaria x ananassa HOM05D004433 ORTHO05D005251 8.5e-09 63.9 40 77.5
FAN20G2992 Fragaria x ananassa HOM05D004433 ORTHO05D005251 8.5e-09 63.9 40 77.5
FAN27G1484 Fragaria x ananassa HOM05D004433 ORTHO05D005251 8.5e-09 63.9 40 77.5
Lj1g0025930 Lotus japonicus HOM05D004433 ORTHO05D005251 8.5e-09 63.9 40 80.0
HPP92_003623 Vanilla planifolia HOM05D004433 ORTHO05D005251 8.5e-09 63.9 40 77.5
CANSAT21G1878 Cannabis sativa HOM05D004433 ORTHO05D005251 1.1e-08 63.5 40 77.5
CANSAT21G2561 Cannabis sativa HOM05D004433 ORTHO05D005251 1.1e-08 63.5 40 77.5
MELO3C003474.2 Cucumis melo HOM05D004433 ORTHO05D005251 1.1e-08 63.5 40 80.0
Dinv27935 Davidia involucrata HOM05D004433 ORTHO05D005251 1.1e-08 63.5 40 77.5
Psat6g036080 Pisum sativum HOM05D004433 ORTHO05D005251 1.1e-08 63.5 40 77.5
Prupe.1G444500 Prunus persica HOM05D004433 ORTHO05D005251 1.1e-08 63.5 40 77.5
Aa31LG5G9810 Aethionema arabicum HOM05D004433 ORTHO05D005251 1.5e-08 63.2 40 72.5
EL10Ac2g03971 Beta vulgaris HOM05D004433 ORTHO05D005251 1.5e-08 63.2 40 75.0
Duzib168G1809 Durio zibethinus HOM05D004433 ORTHO05D005251 1.5e-08 63.2 40 75.0
Lsat_1_v5_gn_6_7781 Lactuca sativa HOM05D004433 ORTHO05D005251 1.5e-08 63.2 40 75.0
MD08G1110300 Malus domestica HOM05D004433 ORTHO05D005251 1.5e-08 63.2 41 73.2
Sc23g0005440 Simmondsia chinensis HOM05D004433 ORTHO05D005251 1.5e-08 63.2 40 77.5
Ah.10g034740 Amaranthus hybridus HOM05D004433 ORTHO05D005251 1.9e-08 62.8 40 72.5
CiPaw.08G027400 Carya illinoinensis HOM05D004433 ORTHO05D005251 2.5e-08 62.4 40 77.5
Duzib150G0295 Durio zibethinus HOM05D004433 ORTHO05D005251 2.5e-08 62.4 40 75.0
Lj7C697T10 Lonicera japonica HOM05D004433 ORTHO05D005251 2.5e-08 62.4 40 77.5
Glyma.14G144100 Glycine max HOM05D004433 ORTHO05D005251 3.2e-08 62.0 40 75.0
Glyma.17G192300 Glycine max HOM05D004433 ORTHO05D005251 3.2e-08 62.0 40 75.0
Phvul.001G078300 Phaseolus vulgaris HOM05D004433 ORTHO05D005251 3.2e-08 62.0 40 75.0
VMungo1383G1648 Vigna mungo HOM05D004433 ORTHO05D005251 3.2e-08 62.0 40 75.0
Atru.chr7.2050 Acer truncatum HOM05D004433 ORTHO05D005251 5.5e-08 61.2 40 77.5
Aqoxy5G01364 Aquilegia oxysepala HOM05D004433 ORTHO05D005251 5.5e-08 61.2 40 75.0
SalBow4G2164 Salvia bowleyana HOM05D004433 ORTHO05D005251 5.5e-08 61.2 40 72.5
CsaV3_3G048450 Cucumis sativus L. HOM05D004433 ORTHO05D005251 7.2e-08 60.8 40 77.5
Migut.A00179 Erythranthe guttata HOM05D004433 ORTHO05D005251 7.2e-08 60.8 40 72.5
Gohir.D06G090400 Gossypium hirsutum HOM05D004433 ORTHO05D005251 7.2e-08 60.8 40 72.5
Gorai.010G104100 Gossypium raimondii HOM05D004433 ORTHO05D005251 7.2e-08 60.8 40 72.5
unitig_32.g11476 Utricularia gibba HOM05D004433 ORTHO05D005251 7.2e-08 60.8 40 75.0
Gohir.A06G091200 Gossypium hirsutum HOM05D004433 ORTHO05D005251 1.6e-07 59.7 40 70.0
COL.COLO4_21003 Corchorus olitorius HOM05D004433 ORTHO05D005251 2.1e-07 59.3 38 73.7
ATR1159G027 Amborella trichopoda HOM05D004433 ORTHO05D005251 3.6e-07 58.5 36 80.6
Zm00001eb153790 Zea mays HOM05D004433 ORTHO05D005251 8.0e-07 57.4 57 50.9
FAN15G3540 Fragaria x ananassa HOM05D004433 ORTHO05D005251 2.3e-06 55.8 40 72.5
FAN20G0434 Fragaria x ananassa HOM05D004433 ORTHO05D005251 2.3e-06 55.8 40 72.5
FAN27G0398 Fragaria x ananassa HOM05D004433 ORTHO05D005251 2.3e-06 55.8 40 72.5
FvH4_2g35230 Fragaria vesca HOM05D004433 ORTHO05D005251 6.7e-06 54.3 40 70.0


User provided reference genes

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