Gene: Nitab4.5_0008242g0010

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0008242g0010
  • Transcript Identifier Nitab4.5_0008242g0010.1
  • Gene Type Coding gene
  • Location Nitab4.5_0008242 : 11198-28845 : negative

Gene Family Information

  • ID HOM05D004433
  • #Genes/#Species 162/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0008242g0010.1
  • SR1-identifier Nta15g11440.1

Descriptions

  • Description Cof protein, Metalloprotease catalytic domain, predicted, HAD-like domain, Endoribonuclease YbeY, conserved site, Endoribonuclease YbeY, HAD-superfamily hydrolase, subfamily IIB
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
InterProrRNA processing
GO:1901259
ISO
PLAZA Integrative Orthologychloroplast rRNA processing AT2G25870
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT2G25870

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016787
IEA
InterProhydrolase activity
GO:0004222
IEA
InterPrometalloendopeptidase activity
GO:0004521
ISO
PLAZA Integrative Orthologyendoribonuclease activity AT2G25870

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G25870

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000150 Cof family
IPR036412 HAD-like superfamily
IPR002036 Endoribonuclease YbeY
IPR023214 HAD superfamily
IPR023091 Metalloprotease catalytic domain superfamily, predicted
IPR006379 HAD-superfamily hydrolase, subfamily IIB
Mapman id Description
16.11.1.9 RNA processing.organelle machinery.ribonuclease activities.endoribonuclease (YbeY)